RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 BRCA1P38398 1863 aaKnown RBP13.14□□□□□ -0.31
SKA2-206ENST00000581068 ZNF213O14771 459 aa13.14□□□□□ -0.31
SKA2-206ENST00000581068 PRKAB2O43741 272 aa13.14□□□□□ -0.31
SKA2-206ENST00000581068 DIXDC1Q155Q3 683 aa13.14□□□□□ -0.31
SKA2-206ENST00000581068 DACT2Q5SW24 774 aa13.14□□□□□ -0.31
SKA2-206ENST00000581068 GIMAP6Q6P9H5 292 aa13.14□□□□□ -0.31
SKA2-206ENST00000581068 NIM1KQ8IY84 436 aa13.14□□□□□ -0.31
SKA2-206ENST00000581068 CERS5Q8N5B7 392 aa13.14□□□□□ -0.31
SKA2-206ENST00000581068 FHDC1Q9C0D6 1143 aaPredicted RBP13.14□□□□□ -0.31
SKA2-206ENST00000581068 NAPBQ9H115 298 aa13.14□□□□□ -0.31
SKA2-206ENST00000581068 ZSWIM6Q9HCJ5 1215 aa13.14□□□□□ -0.31
SKA2-206ENST00000581068 KCNQ5Q9NR82 932 aa13.14□□□□□ -0.31
SKA2-206ENST00000581068 AATFQ9NY61 560 aaKnown RBP eCLIP13.14□□□□□ -0.31
SKA2-206ENST00000581068 CYP46A1Q9Y6A2 500 aa13.14□□□□□ -0.31
SKA2-206ENST00000581068 CHD4Q14839 1912 aa13.13□□□□□ -0.31
SKA2-206ENST00000581068 GPR75-ASB3A0A0A6YYF3 556 aa13.13□□□□□ -0.31
SKA2-206ENST00000581068 PLCG2P16885 1265 aa13.13□□□□□ -0.31
SKA2-206ENST00000581068 CASTP20810 708 aaKnown RBP13.13□□□□□ -0.31
SKA2-206ENST00000581068 TDO2P48775 406 aa13.13□□□□□ -0.31
SKA2-206ENST00000581068 MCM2P49736 904 aa13.13□□□□□ -0.31
SKA2-206ENST00000581068 ADCK5Q3MIX3 580 aa13.13□□□□□ -0.31
SKA2-206ENST00000581068 NEK1Q96PY6 1258 aa13.13□□□□□ -0.31
SKA2-206ENST00000581068 MXD3Q9BW11 206 aa13.13□□□□□ -0.31
SKA2-206ENST00000581068 MRIQ9BWK5 157 aa13.13□□□□□ -0.31
SKA2-206ENST00000581068 ZNRF3Q9ULT6 936 aa13.13□□□□□ -0.31
SKA2-206ENST00000581068 TTF2Q9UNY4 1162 aaKnown RBP13.13□□□□□ -0.31
SKA2-206ENST00000581068 GAKO14976 1311 aa13.13□□□□□ -0.31
SKA2-206ENST00000581068 YDJCA8MPS7 323 aa13.12□□□□□ -0.31
SKA2-206ENST00000581068 E7EWF7 191 aa13.12□□□□□ -0.31
SKA2-206ENST00000581068 F8W031 263 aaPredicted RBP13.12□□□□□ -0.31
SKA2-206ENST00000581068 NFKBIEO00221 500 aa13.12□□□□□ -0.31
SKA2-206ENST00000581068 HMGB1P09429 215 aaKnown RBP13.12□□□□□ -0.31
SKA2-206ENST00000581068 BTDP43251 543 aa13.12□□□□□ -0.31
SKA2-206ENST00000581068 HDLBPQ00341 1268 aaKnown RBP13.12□□□□□ -0.31
SKA2-206ENST00000581068 BLOC1S2Q6QNY1 142 aa13.12□□□□□ -0.31
SKA2-206ENST00000581068 HHIPL2Q6UWX4 724 aa13.12□□□□□ -0.31
SKA2-206ENST00000581068 RUFY3Q7L099 469 aa13.12□□□□□ -0.31
SKA2-206ENST00000581068 JDP2Q8WYK2 163 aa13.12□□□□□ -0.31
SKA2-206ENST00000581068 UPF3BQ9BZI7 483 aaKnown RBP13.12□□□□□ -0.31
SKA2-206ENST00000581068 EPB41L4AQ9HCS5 686 aaPredicted RBP13.12□□□□□ -0.31
SKA2-206ENST00000581068 ATP8A2Q9NTI2 1148 aa13.12□□□□□ -0.31
SKA2-206ENST00000581068 TAF6LQ9Y6J9 622 aa13.12□□□□□ -0.31
SKA2-206ENST00000581068 MYO3BQ8WXR4 1341 aa13.12□□□□□ -0.31
SKA2-206ENST00000581068 FER1L6Q2WGJ9 1857 aa13.11□□□□□ -0.31
SKA2-206ENST00000581068 K7ELQ4 463 aaPredicted RBP13.11□□□□□ -0.31
SKA2-206ENST00000581068 SLC4A3P48751 1232 aa13.11□□□□□ -0.31
SKA2-206ENST00000581068 HAND2P61296 217 aa13.11□□□□□ -0.31
SKA2-206ENST00000581068 SH3RF3Q8TEJ3 882 aaPredicted RBP13.11□□□□□ -0.31
SKA2-206ENST00000581068 SDR42E1Q8WUS8 393 aa13.11□□□□□ -0.31
SKA2-206ENST00000581068 TEKT1Q969V4 418 aa13.11□□□□□ -0.31
SKA2-206ENST00000581068 SYT17Q9BSW7 474 aa13.11□□□□□ -0.31
SKA2-206ENST00000581068 PDRG1Q9NUG6 133 aa13.11□□□□□ -0.31
SKA2-206ENST00000581068 DAGLAQ9Y4D2 1042 aa13.11□□□□□ -0.31
SKA2-206ENST00000581068 CD2BP2O95400 341 aaKnown RBP13.1□□□□□ -0.31
SKA2-206ENST00000581068 VIL1P09327 827 aaKnown RBP13.1□□□□□ -0.31
SKA2-206ENST00000581068 RPS6KB1P23443 525 aa13.1□□□□□ -0.31
SKA2-206ENST00000581068 USP5P45974 858 aa13.1□□□□□ -0.31
SKA2-206ENST00000581068 RSBN1LQ6PCB5 846 aaPredicted RBP13.1□□□□□ -0.31
SKA2-206ENST00000581068 STOX1Q6ZVD7 989 aa13.1□□□□□ -0.31
SKA2-206ENST00000581068 TTC14Q96N46 770 aa13.1□□□□□ -0.31
SKA2-206ENST00000581068 ALDH8A1Q9H2A2 487 aaPredicted RBP13.1□□□□□ -0.31
SKA2-206ENST00000581068 ARFGEF1Q9Y6D6 1849 aa13.09□□□□□ -0.31
SKA2-206ENST00000581068 PSMD14O00487 310 aa13.09□□□□□ -0.31
SKA2-206ENST00000581068 RAD17O75943 681 aa13.09□□□□□ -0.31
SKA2-206ENST00000581068 CPA1P15085 419 aa13.09□□□□□ -0.31
SKA2-206ENST00000581068 CRKP46108 304 aa13.09□□□□□ -0.31
SKA2-206ENST00000581068 SCNN1DP51172 638 aa13.09□□□□□ -0.31
SKA2-206ENST00000581068 TRDNQ13061 729 aa13.09□□□□□ -0.31
SKA2-206ENST00000581068 SBK1Q52WX2 424 aa13.09□□□□□ -0.31
SKA2-206ENST00000581068 ARHGAP27Q6ZUM4 889 aa13.09□□□□□ -0.31
SKA2-206ENST00000581068 DHX32Q7L7V1 743 aaKnown RBP13.09□□□□□ -0.31
SKA2-206ENST00000581068 KIAA0825Q8IV33 1275 aa13.09□□□□□ -0.31
SKA2-206ENST00000581068 TEX11Q8IYF3 940 aa13.09□□□□□ -0.31
SKA2-206ENST00000581068 NCOA7Q8NI08 942 aa13.09□□□□□ -0.31
SKA2-206ENST00000581068 DCP1AQ9NPI6 582 aaPredicted RBP13.09□□□□□ -0.31
SKA2-206ENST00000581068 ANAPC4Q9UJX5 808 aa13.09□□□□□ -0.31
SKA2-206ENST00000581068 MYH2Q9UKX2 1941 aa13.09□□□□□ -0.31
SKA2-206ENST00000581068 MINDY4BA8MYZ0 360 aa13.08□□□□□ -0.32
SKA2-206ENST00000581068 AK2P54819 239 aa13.08□□□□□ -0.32
SKA2-206ENST00000581068 RHBDL3P58872 404 aa13.08□□□□□ -0.32
SKA2-206ENST00000581068 RASSF7Q02833 373 aa13.08□□□□□ -0.32
SKA2-206ENST00000581068 CTDSPL2Q05D32 466 aa13.08□□□□□ -0.32
SKA2-206ENST00000581068 CXCL9Q07325 125 aa13.08□□□□□ -0.32
SKA2-206ENST00000581068 PPARAQ07869 468 aa13.08□□□□□ -0.32
SKA2-206ENST00000581068 TNIP1Q15025 636 aa13.08□□□□□ -0.32
SKA2-206ENST00000581068 ANKRD1Q15327 319 aa13.08□□□□□ -0.32
SKA2-206ENST00000581068 CIAPIN1Q6FI81 312 aa13.08□□□□□ -0.32
SKA2-206ENST00000581068 CTR9Q6PD62 1173 aa13.08□□□□□ -0.32
SKA2-206ENST00000581068 RALYLQ86SE5 291 aaKnown RBP13.08□□□□□ -0.32
SKA2-206ENST00000581068 AGBL3Q8NEM8 1001 aa13.08□□□□□ -0.32
SKA2-206ENST00000581068 ZDHHC15Q96MV8 337 aa13.08□□□□□ -0.32
SKA2-206ENST00000581068 RNF41Q9H4P4 317 aaPredicted RBP13.08□□□□□ -0.32
SKA2-206ENST00000581068 ARPP21Q9UBL0 812 aaPredicted RBP13.08□□□□□ -0.32
SKA2-206ENST00000581068 SERPINA10Q9UK55 444 aa13.08□□□□□ -0.32
SKA2-206ENST00000581068 HDAC9Q9UKV0 1011 aa13.08□□□□□ -0.32
SKA2-206ENST00000581068 SCN9AQ15858 1988 aa13.08□□□□□ -0.32
SKA2-206ENST00000581068 COL4A5P29400 1685 aa13.08□□□□□ -0.32
SKA2-206ENST00000581068 USP17L12C9JPN9 530 aa13.07□□□□□ -0.32
SKA2-206ENST00000581068 USP17L21D6R901 530 aa13.07□□□□□ -0.32
SKA2-206ENST00000581068 RBM5P52756 815 aaKnown RBP eCLIP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms