RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 ZBTB22O15209 634 aa7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 ST18O60284 1047 aa7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 USP17L8P0C7I0 530 aa7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 CACNB3P54284 484 aa7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 RHBDL3P58872 404 aa7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 ALX1Q15699 326 aa7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 TSGA10IPQ3SY00 556 aa7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 SPTY2D1Q68D10 685 aaPredicted RBP7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 BLOC1S2Q6QNY1 142 aa7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 TICAM2Q86XR7 235 aa7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 MB21D2Q8IYB1 491 aaPredicted RBP7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 TGFBRAP1Q8WUH2 860 aa7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 DYNLL2Q96FJ2 89 aa7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 NEK1Q96PY6 1258 aa7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 TM6SF1Q9BZW5 370 aa7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 NAPBQ9H115 298 aa7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 SPON1Q9HCB6 807 aa7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 DDX4Q9NQI0 724 aaKnown RBP7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 DAXXQ9UER7 740 aaPredicted RBP7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 TPCN1Q9ULQ1 816 aa7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 TTF2Q9UNY4 1162 aaKnown RBP7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 ZBTB12Q9Y330 459 aaPredicted RBP7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 CYP46A1Q9Y6A2 500 aa7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 MYH3P11055 1940 aa7.32□□□□□ -1.24
RNU4ATAC-201ENST00000580972 GAKO14976 1311 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 USP17L3A6NCW0 530 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 USP17L4A6NCW7 530 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 B4E1Z4 1266 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 USP17L12C9JPN9 530 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 USP17L21D6R901 530 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 ZNF213O14771 459 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 PPFIA3O75145 1194 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 PRDM1O75626 825 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 DDIT3P35638 169 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 IARSP41252 1262 aaKnown RBP7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 EXOSC10Q01780 885 aaKnown RBP7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 PPARAQ07869 468 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 APOBRQ0VD83 1088 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 STK3Q13188 491 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 ME3Q16798 604 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 IMMTQ16891 758 aaKnown RBP7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 QSER1Q2KHR3 1735 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 RRP12Q5JTH9 1297 aaKnown RBP7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 RNF20Q5VTR2 975 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 CC2D2BQ6DHV5 1058 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 CTR9Q6PD62 1173 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 Q6ZUG5 572 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 USP17L1Q7RTZ2 530 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 CCDC83Q8IWF9 413 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 ZFPM1Q8IX07 1006 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 TEX11Q8IYF3 940 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 RTKN2Q8IZC4 609 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 SLC44A5Q8NCS7 719 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 PSMD1Q99460 953 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 CRNKL1Q9BZJ0 848 aaKnown RBP7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 DCP1AQ9NPI6 582 aaPredicted RBP7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 CTNNA3Q9UI47 895 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 SLX4Q8IY92 1834 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 A0A1B0GUL6 1792 aa7.31□□□□□ -1.24
RNU4ATAC-201ENST00000580972 GPR75-ASB3A0A0A6YYF3 556 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 PRC1O43663 620 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 PSMA5P28066 241 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 CRKP46108 304 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 PPP4CP60510 307 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 GSTO1P78417 241 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 NFIAQ12857 509 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 PICALMQ13492 652 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 PKP1Q13835 747 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 STRIP1Q5VSL9 837 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 FOXD4L5Q5VV16 416 aaPredicted RBP7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 APOBEC3HQ6NTF7 200 aaKnown RBP7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 CDC42EP5Q6NZY7 148 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 PODNQ7Z5L7 613 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 NIM1KQ8IY84 436 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 SUPT20HQ8NEM7 779 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 TBC1D22AQ8WUA7 517 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 FOXD4L4Q8WXT5 416 aaPredicted RBP7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 BRF1Q92994 677 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 CHAMP1Q96JM3 812 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 ZKSCAN3Q9BRR0 538 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 TAOK3Q9H2K8 898 aa7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 MKRN1Q9UHC7 482 aaKnown RBP7.3□□□□□ -1.24
RNU4ATAC-201ENST00000580972 ZMYM6O95789 1325 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 FLT1P17948 1338 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 ZNF541Q9H0D2 1346 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 KDM4AO75164 1064 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 WDHD1O75717 1129 aaPredicted RBP7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 YBX3P16989 372 aaKnown RBP eCLIP7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 GNAT2P19087 354 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 USP5P45974 858 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 PLCD1P51178 756 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 CXCL9Q07325 125 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 CUL4AQ13619 759 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 KRT32Q14532 448 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 FAM47AQ5JRC9 791 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 RSBN1LQ6PCB5 846 aaPredicted RBP7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 DHX32Q7L7V1 743 aaKnown RBP7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 GMLQ99445 158 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 MYL10Q9BUA6 226 aa7.29□□□□□ -1.24
RNU4ATAC-201ENST00000580972 NACAP1Q9BZK3 213 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms