RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 PPP4CP60510 307 aa19.69■□□□□ 0.74
ERCC4-208ENST00000576348 CFAP100Q494V2 611 aa19.69■□□□□ 0.74
ERCC4-208ENST00000576348 VPS53Q5VIR6 699 aa19.69■□□□□ 0.74
ERCC4-208ENST00000576348 TEX11Q8IYF3 940 aa19.69■□□□□ 0.74
ERCC4-208ENST00000576348 MAP4K1Q92918 833 aa19.69■□□□□ 0.74
ERCC4-208ENST00000576348 TBC1D32Q96NH3 1257 aa19.69■□□□□ 0.74
ERCC4-208ENST00000576348 NAPBQ9H115 298 aa19.69■□□□□ 0.74
ERCC4-208ENST00000576348 MAST2Q6P0Q8 1798 aa19.69■□□□□ 0.74
ERCC4-208ENST00000576348 RPAP1Q9BWH6 1393 aaPredicted RBP19.69■□□□□ 0.74
ERCC4-208ENST00000576348 ZKSCAN1P17029 563 aaPredicted RBP19.68■□□□□ 0.74
ERCC4-208ENST00000576348 MMP14P50281 582 aa19.68■□□□□ 0.74
ERCC4-208ENST00000576348 DLGAP5Q15398 846 aa19.68■□□□□ 0.74
ERCC4-208ENST00000576348 GPC2Q8N158 579 aa19.68■□□□□ 0.74
ERCC4-208ENST00000576348 SH3RF3Q8TEJ3 882 aaPredicted RBP19.68■□□□□ 0.74
ERCC4-208ENST00000576348 ZDHHC15Q96MV8 337 aa19.68■□□□□ 0.74
ERCC4-208ENST00000576348 GMLQ99445 158 aa19.68■□□□□ 0.74
ERCC4-208ENST00000576348 USP40Q9NVE5 1235 aa19.68■□□□□ 0.74
ERCC4-208ENST00000576348 PRKAB2O43741 272 aa19.67■□□□□ 0.74
ERCC4-208ENST00000576348 AMOTL1Q8IY63 956 aa19.67■□□□□ 0.74
ERCC4-208ENST00000576348 TSHZ2Q9NRE2 1034 aa19.67■□□□□ 0.74
ERCC4-208ENST00000576348 HSPA4P34932 840 aa19.66■□□□□ 0.74
ERCC4-208ENST00000576348 IMMTQ16891 758 aaKnown RBP19.66■□□□□ 0.74
ERCC4-208ENST00000576348 IFNL3Q8IZI9 196 aa19.66■□□□□ 0.74
ERCC4-208ENST00000576348 SDR42E1Q8WUS8 393 aa19.66■□□□□ 0.74
ERCC4-208ENST00000576348 TMOD2Q9NZR1 351 aa19.66■□□□□ 0.74
ERCC4-208ENST00000576348 GSG1L2A8MUP6 293 aa19.65■□□□□ 0.74
ERCC4-208ENST00000576348 H7C1D1 291 aa19.65■□□□□ 0.74
ERCC4-208ENST00000576348 LMOD1P29536 600 aaPredicted RBP19.65■□□□□ 0.74
ERCC4-208ENST00000576348 RBM25P49756 843 aaKnown RBP19.65■□□□□ 0.74
ERCC4-208ENST00000576348 ALX1Q15699 326 aa19.65■□□□□ 0.74
ERCC4-208ENST00000576348 CREB3L3Q68CJ9 461 aa19.65■□□□□ 0.74
ERCC4-208ENST00000576348 DPY19L2Q6NUT2 758 aa19.65■□□□□ 0.74
ERCC4-208ENST00000576348 DPF2Q92785 391 aa19.65■□□□□ 0.74
ERCC4-208ENST00000576348 ATP8A2Q9NTI2 1148 aa19.65■□□□□ 0.74
ERCC4-208ENST00000576348 CHD4Q14839 1912 aa19.64■□□□□ 0.74
ERCC4-208ENST00000576348 SCN9AQ15858 1988 aa19.64■□□□□ 0.74
ERCC4-208ENST00000576348 MYO1BO43795 1136 aa19.64■□□□□ 0.73
ERCC4-208ENST00000576348 FGAP02671 866 aa19.64■□□□□ 0.73
ERCC4-208ENST00000576348 APOBEC3HQ6NTF7 200 aaKnown RBP19.64■□□□□ 0.73
ERCC4-208ENST00000576348 GIMAP6Q6P9H5 292 aa19.64■□□□□ 0.73
ERCC4-208ENST00000576348 MICALL2Q8IY33 904 aa19.64■□□□□ 0.73
ERCC4-208ENST00000576348 TGFBRAP1Q8WUH2 860 aa19.64■□□□□ 0.73
ERCC4-208ENST00000576348 CNOT7Q9UIV1 285 aaKnown RBP19.64■□□□□ 0.73
ERCC4-208ENST00000576348 MYH7P12883 1935 aa19.63■□□□□ 0.73
ERCC4-208ENST00000576348 ZC3H4Q9UPT8 1303 aaKnown RBP19.63■□□□□ 0.73
ERCC4-208ENST00000576348 ZNF213O14771 459 aa19.63■□□□□ 0.73
ERCC4-208ENST00000576348 SLC27A2O14975 620 aa19.63■□□□□ 0.73
ERCC4-208ENST00000576348 ANAPC15P60006 121 aa19.63■□□□□ 0.73
ERCC4-208ENST00000576348 RBM26Q5T8P6 1007 aaKnown RBP19.63■□□□□ 0.73
ERCC4-208ENST00000576348 CDC42EP5Q6NZY7 148 aa19.63■□□□□ 0.73
ERCC4-208ENST00000576348 MAPKAPK5Q8IW41 473 aa19.63■□□□□ 0.73
ERCC4-208ENST00000576348 EPB41L4AQ9HCS5 686 aaPredicted RBP19.63■□□□□ 0.73
ERCC4-208ENST00000576348 MYOZ2Q9NPC6 264 aa19.63■□□□□ 0.73
ERCC4-208ENST00000576348 ZMYM6O95789 1325 aa19.62■□□□□ 0.73
ERCC4-208ENST00000576348 SPDYE2BA6NHP3 402 aa19.62■□□□□ 0.73
ERCC4-208ENST00000576348 SPDYE6P0CI01 402 aa19.62■□□□□ 0.73
ERCC4-208ENST00000576348 ZNF280AP59817 542 aaPredicted RBP19.62■□□□□ 0.73
ERCC4-208ENST00000576348 PICALMQ13492 652 aa19.62■□□□□ 0.73
ERCC4-208ENST00000576348 KRT32Q14532 448 aa19.62■□□□□ 0.73
ERCC4-208ENST00000576348 NECTIN1Q15223 517 aa19.62■□□□□ 0.73
ERCC4-208ENST00000576348 MCM9Q9NXL9 1143 aa19.62■□□□□ 0.73
ERCC4-208ENST00000576348 MINDY4BA8MYZ0 360 aa19.61■□□□□ 0.73
ERCC4-208ENST00000576348 FOXP2O15409 715 aa19.61■□□□□ 0.73
ERCC4-208ENST00000576348 DDNO94850 711 aaPredicted RBP19.61■□□□□ 0.73
ERCC4-208ENST00000576348 POLR3DP05423 398 aaPredicted RBP19.61■□□□□ 0.73
ERCC4-208ENST00000576348 RHBDL3P58872 404 aa19.61■□□□□ 0.73
ERCC4-208ENST00000576348 HAND2P61296 217 aa19.61■□□□□ 0.73
ERCC4-208ENST00000576348 TDRD3Q9H7E2 651 aaKnown RBP19.61■□□□□ 0.73
ERCC4-208ENST00000576348 DCP1AQ9NPI6 582 aaPredicted RBP19.61■□□□□ 0.73
ERCC4-208ENST00000576348 PCDHAC2Q9Y5I4 1007 aa19.61■□□□□ 0.73
ERCC4-208ENST00000576348 CCDC88AQ3V6T2 1871 aa19.6■□□□□ 0.73
ERCC4-208ENST00000576348 MYO5AQ9Y4I1 1855 aaKnown RBP19.6■□□□□ 0.73
ERCC4-208ENST00000576348 SLC3A2P08195 630 aaKnown RBP19.6■□□□□ 0.73
ERCC4-208ENST00000576348 MTMR14Q8NCE2 650 aa19.6■□□□□ 0.73
ERCC4-208ENST00000576348 PRMT6Q96LA8 375 aaPredicted RBP19.6■□□□□ 0.73
ERCC4-208ENST00000576348 GPRC5DQ9NZD1 345 aa19.6■□□□□ 0.73
ERCC4-208ENST00000576348 ARPP21Q9UBL0 812 aaPredicted RBP19.6■□□□□ 0.73
ERCC4-208ENST00000576348 SAP30BPQ9UHR5 308 aaKnown RBP19.6■□□□□ 0.73
ERCC4-208ENST00000576348 PALD1Q9ULE6 856 aa19.6■□□□□ 0.73
ERCC4-208ENST00000576348 SNX14Q9Y5W7 946 aa19.6■□□□□ 0.73
ERCC4-208ENST00000576348 FLT1P17948 1338 aa19.59■□□□□ 0.73
ERCC4-208ENST00000576348 SHTN1A0MZ66 631 aa19.59■□□□□ 0.73
ERCC4-208ENST00000576348 PSMA5P28066 241 aa19.59■□□□□ 0.73
ERCC4-208ENST00000576348 ANP32AP39687 249 aaKnown RBP19.59■□□□□ 0.73
ERCC4-208ENST00000576348 KIF4BQ2VIQ3 1234 aa19.59■□□□□ 0.73
ERCC4-208ENST00000576348 TBC1D10BQ4KMP7 808 aaPredicted RBP19.59■□□□□ 0.73
ERCC4-208ENST00000576348 VEZTQ9HBM0 779 aa19.59■□□□□ 0.73
ERCC4-208ENST00000576348 CLRN2A0PK11 232 aa19.58■□□□□ 0.72
ERCC4-208ENST00000576348 USP17L12C9JPN9 530 aa19.58■□□□□ 0.72
ERCC4-208ENST00000576348 USP17L21D6R901 530 aa19.58■□□□□ 0.72
ERCC4-208ENST00000576348 CYP21A2P08686 494 aa19.58■□□□□ 0.72
ERCC4-208ENST00000576348 CACNB3P54284 484 aa19.58■□□□□ 0.72
ERCC4-208ENST00000576348 TRDNQ13061 729 aa19.58■□□□□ 0.72
ERCC4-208ENST00000576348 RABEP1Q15276 862 aa19.58■□□□□ 0.72
ERCC4-208ENST00000576348 RASEFQ8IZ41 740 aa19.58■□□□□ 0.72
ERCC4-208ENST00000576348 JAKMIP1Q96N16 626 aaKnown RBP19.58■□□□□ 0.72
ERCC4-208ENST00000576348 ZNF70Q9UC06 446 aaPredicted RBP19.58■□□□□ 0.72
ERCC4-208ENST00000576348 WDHD1O75717 1129 aaPredicted RBP19.57■□□□□ 0.72
ERCC4-208ENST00000576348 PPARAQ07869 468 aa19.57■□□□□ 0.72
ERCC4-208ENST00000576348 CTR9Q6PD62 1173 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms