RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 USP17L20D6RJB6 530 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 PSMD14O00487 310 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 ZBTB7BO15156 539 aaPredicted RBP6.91□□□□□ -1.3
TRIM25-208ENST00000574234 ZNF16P17020 682 aaPredicted RBP6.91□□□□□ -1.3
TRIM25-208ENST00000574234 BMP8BP34820 402 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 USP17L24Q0WX57 530 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 CRTC2Q53ET0 693 aaPredicted RBP6.91□□□□□ -1.3
TRIM25-208ENST00000574234 LYPD8Q6UX82 237 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 UBE2Q1Q7Z7E8 422 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 SP8Q8IXZ3 490 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 FAM174AQ8TBP5 190 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 CD99L2Q8TCZ2 262 aa6.91□□□□□ -1.3
TRIM25-208ENST00000574234 CLP1Q92989 425 aaKnown RBP6.91□□□□□ -1.3
TRIM25-208ENST00000574234 LAMA2P24043 3122 aaKnown RBP6.91□□□□□ -1.3
TRIM25-208ENST00000574234 WTIPA6NIX2 430 aaPredicted RBP6.9□□□□□ -1.3
TRIM25-208ENST00000574234 UBE2Q2LH0YL09 131 aa6.9□□□□□ -1.3
TRIM25-208ENST00000574234 TCERG1O14776 1098 aaKnown RBP6.9□□□□□ -1.3
TRIM25-208ENST00000574234 BBOX1O75936 387 aa6.9□□□□□ -1.3
TRIM25-208ENST00000574234 ZBTB48P10074 688 aaPredicted RBP6.9□□□□□ -1.3
TRIM25-208ENST00000574234 SP3Q02447 781 aa6.9□□□□□ -1.3
TRIM25-208ENST00000574234 PTK7Q13308 1070 aa6.9□□□□□ -1.3
TRIM25-208ENST00000574234 TCIRG1Q13488 830 aa6.9□□□□□ -1.3
TRIM25-208ENST00000574234 ARHGEF6Q15052 776 aa6.9□□□□□ -1.3
TRIM25-208ENST00000574234 LRIT3Q3SXY7 679 aa6.9□□□□□ -1.3
TRIM25-208ENST00000574234 ANGEL2Q5VTE6 544 aaKnown RBP6.9□□□□□ -1.3
TRIM25-208ENST00000574234 SPRYD7Q5W111 196 aa6.9□□□□□ -1.3
TRIM25-208ENST00000574234 MOB2Q70IA6 237 aa6.9□□□□□ -1.3
TRIM25-208ENST00000574234 NKX2-3Q8TAU0 364 aa6.9□□□□□ -1.3
TRIM25-208ENST00000574234 SHISA4Q96DD7 197 aa6.9□□□□□ -1.3
TRIM25-208ENST00000574234 FAM122AQ96E09 287 aa6.9□□□□□ -1.3
TRIM25-208ENST00000574234 SIN3AQ96ST3 1273 aa6.9□□□□□ -1.3
TRIM25-208ENST00000574234 ZBED2Q9BTP6 218 aa6.9□□□□□ -1.3
TRIM25-208ENST00000574234 CDH23Q9H251 3354 aa6.9□□□□□ -1.31
TRIM25-208ENST00000574234 ERVV-1B6SEH8 477 aa6.89□□□□□ -1.31
TRIM25-208ENST00000574234 CFHP08603 1231 aa6.89□□□□□ -1.31
TRIM25-208ENST00000574234 IL13P35225 146 aa6.89□□□□□ -1.31
TRIM25-208ENST00000574234 ZNF280AP59817 542 aaPredicted RBP6.89□□□□□ -1.31
TRIM25-208ENST00000574234 TEFQ10587 303 aa6.89□□□□□ -1.31
TRIM25-208ENST00000574234 HLFQ16534 295 aa6.89□□□□□ -1.31
TRIM25-208ENST00000574234 Q7L0L9 218 aa6.89□□□□□ -1.31
TRIM25-208ENST00000574234 DEPDC4Q8N2C3 294 aa6.89□□□□□ -1.31
TRIM25-208ENST00000574234 FAM200AQ8TCP9 573 aa6.89□□□□□ -1.31
TRIM25-208ENST00000574234 KCNK17Q96T54 332 aa6.89□□□□□ -1.31
TRIM25-208ENST00000574234 FKBPLQ9UIM3 349 aa6.89□□□□□ -1.31
TRIM25-208ENST00000574234 USP16Q9Y5T5 823 aa6.89□□□□□ -1.31
TRIM25-208ENST00000574234 PTCH2Q9Y6C5 1203 aa6.89□□□□□ -1.31
TRIM25-208ENST00000574234 ABCC4O15439 1325 aa6.89□□□□□ -1.31
TRIM25-208ENST00000574234 ASTN2O75129 1339 aaPredicted RBP6.89□□□□□ -1.31
TRIM25-208ENST00000574234 RPTORQ8N122 1335 aa6.89□□□□□ -1.31
TRIM25-208ENST00000574234 RTL9Q8NET4 1388 aa6.89□□□□□ -1.31
TRIM25-208ENST00000574234 COL4A1P02462 1669 aa6.88□□□□□ -1.31
TRIM25-208ENST00000574234 CEMIPQ8WUJ3 1361 aa6.88□□□□□ -1.31
TRIM25-208ENST00000574234 IGF2BP3O00425 579 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRIM25-208ENST00000574234 NF2P35240 595 aa6.88□□□□□ -1.31
TRIM25-208ENST00000574234 SERPINB4P48594 390 aa6.88□□□□□ -1.31
TRIM25-208ENST00000574234 MARSP56192 900 aaKnown RBP6.88□□□□□ -1.31
TRIM25-208ENST00000574234 CAP1Q01518 475 aa6.88□□□□□ -1.31
TRIM25-208ENST00000574234 CRHR2Q13324 411 aa6.88□□□□□ -1.31
TRIM25-208ENST00000574234 SCARF1Q14162 830 aa6.88□□□□□ -1.31
TRIM25-208ENST00000574234 MTHFSDQ2M296 383 aaKnown RBP6.88□□□□□ -1.31
TRIM25-208ENST00000574234 LDLRAD1Q5T700 205 aa6.88□□□□□ -1.31
TRIM25-208ENST00000574234 OTUD7BQ6GQQ9 843 aa6.88□□□□□ -1.31
TRIM25-208ENST00000574234 TMC4Q7Z404 712 aa6.88□□□□□ -1.31
TRIM25-208ENST00000574234 NLRP3Q96P20 1036 aa6.88□□□□□ -1.31
TRIM25-208ENST00000574234 COL1A1P02452 1464 aaPredicted RBP6.87□□□□□ -1.31
TRIM25-208ENST00000574234 UBN2Q6ZU65 1347 aa6.87□□□□□ -1.31
TRIM25-208ENST00000574234 SYNGAP1Q96PV0 1343 aa6.87□□□□□ -1.31
TRIM25-208ENST00000574234 VIL1P09327 827 aaKnown RBP6.87□□□□□ -1.31
TRIM25-208ENST00000574234 CAPN2P17655 700 aa6.87□□□□□ -1.31
TRIM25-208ENST00000574234 RASA1P20936 1047 aa6.87□□□□□ -1.31
TRIM25-208ENST00000574234 ATP2B4P23634 1241 aa6.87□□□□□ -1.31
TRIM25-208ENST00000574234 GJA8P48165 433 aa6.87□□□□□ -1.31
TRIM25-208ENST00000574234 PIP4K2AP48426 406 aaPredicted RBP6.87□□□□□ -1.31
TRIM25-208ENST00000574234 SLC4A3P48751 1232 aa6.87□□□□□ -1.31
TRIM25-208ENST00000574234 SLC10A5Q5PT55 438 aa6.87□□□□□ -1.31
TRIM25-208ENST00000574234 MORN1Q5T089 497 aa6.87□□□□□ -1.31
TRIM25-208ENST00000574234 NBPF10Q6P3W6 841 aaKnown RBP6.87□□□□□ -1.31
TRIM25-208ENST00000574234 POTEHQ6S545 545 aa6.87□□□□□ -1.31
TRIM25-208ENST00000574234 ARMC9Q7Z3E5 817 aa6.87□□□□□ -1.31
TRIM25-208ENST00000574234 ANKMY2Q8IV38 441 aa6.87□□□□□ -1.31
TRIM25-208ENST00000574234 RABGEF1Q9UJ41 708 aa6.87□□□□□ -1.31
TRIM25-208ENST00000574234 COL2A1P02458 1487 aaPredicted RBP6.86□□□□□ -1.31
TRIM25-208ENST00000574234 TTC28Q96AY4 2481 aa6.86□□□□□ -1.31
TRIM25-208ENST00000574234 ATP5J2-PTCD1G3V325 749 aa6.86□□□□□ -1.31
TRIM25-208ENST00000574234 LZTS3O60299 673 aaPredicted RBP6.86□□□□□ -1.31
TRIM25-208ENST00000574234 NTSR2O95665 410 aa6.86□□□□□ -1.31
TRIM25-208ENST00000574234 GNRH1P01148 92 aa6.86□□□□□ -1.31
TRIM25-208ENST00000574234 SNRPA1P09661 255 aaKnown RBP6.86□□□□□ -1.31
TRIM25-208ENST00000574234 PRMT2P55345 433 aa6.86□□□□□ -1.31
TRIM25-208ENST00000574234 PTPN12Q05209 780 aaKnown RBP6.86□□□□□ -1.31
TRIM25-208ENST00000574234 NEUROD1Q13562 356 aa6.86□□□□□ -1.31
TRIM25-208ENST00000574234 NCOA4Q13772 614 aa6.86□□□□□ -1.31
TRIM25-208ENST00000574234 Q3C1V9 767 aa6.86□□□□□ -1.31
TRIM25-208ENST00000574234 FAM109BQ6ICB4 259 aaPredicted RBP6.86□□□□□ -1.31
TRIM25-208ENST00000574234 PHTF2Q8N3S3 785 aa6.86□□□□□ -1.31
TRIM25-208ENST00000574234 AGBL3Q8NEM8 1001 aa6.86□□□□□ -1.31
TRIM25-208ENST00000574234 IL17REQ8NFR9 667 aa6.86□□□□□ -1.31
TRIM25-208ENST00000574234 GDF15Q99988 308 aa6.86□□□□□ -1.31
TRIM25-208ENST00000574234 DBNDD1Q9H9R9 158 aa6.86□□□□□ -1.31
TRIM25-208ENST00000574234 MYOZ2Q9NPC6 264 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms