RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ADD2P35612 726 aa22.03■■□□□ 1.12
SCARF1-206ENST00000573852 CLIC6Q96NY7 704 aa22.03■■□□□ 1.12
SCARF1-206ENST00000573852 RIC1Q4ADV7 1423 aa22.03■■□□□ 1.12
SCARF1-206ENST00000573852 AKAP11Q9UKA4 1901 aa22.03■■□□□ 1.12
SCARF1-206ENST00000573852 GABPB1Q06547 395 aaPredicted RBP22.03■■□□□ 1.12
SCARF1-206ENST00000573852 MAP3K14Q99558 947 aa22.03■■□□□ 1.12
SCARF1-206ENST00000573852 FAM53CQ9NYF3 392 aa22.03■■□□□ 1.12
SCARF1-206ENST00000573852 PPP6R2O75170 966 aa22.02■■□□□ 1.12
SCARF1-206ENST00000573852 PCCAP05165 728 aaPredicted RBP22.02■■□□□ 1.12
SCARF1-206ENST00000573852 ERCC6LQ2NKX8 1250 aa22.02■■□□□ 1.12
SCARF1-206ENST00000573852 SLC9C2Q5TAH2 1124 aa22.02■■□□□ 1.12
SCARF1-206ENST00000573852 APOA5Q6Q788 366 aa22.02■■□□□ 1.12
SCARF1-206ENST00000573852 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.02■■□□□ 1.123e-6■■■■■ 34.1
SCARF1-206ENST00000573852 KRT222Q8N1A0 295 aa22.02■■□□□ 1.11
SCARF1-206ENST00000573852 RIPOR2Q9Y4F9 1068 aa22.02■■□□□ 1.11
SCARF1-206ENST00000573852 SPATA31A3Q5VYP0 1347 aa22.02■■□□□ 1.11
SCARF1-206ENST00000573852 PAPPAQ13219 1627 aa22.01■■□□□ 1.11
SCARF1-206ENST00000573852 TRHP20396 242 aaPredicted RBP22.01■■□□□ 1.11
SCARF1-206ENST00000573852 UBASH3AP57075 661 aa22.01■■□□□ 1.11
SCARF1-206ENST00000573852 TRIM28Q13263 835 aaKnown RBP22.01■■□□□ 1.11
SCARF1-206ENST00000573852 METTL24Q5JXM2 366 aa22.01■■□□□ 1.11
SCARF1-206ENST00000573852 TOM1L2Q6ZVM7 507 aa22.01■■□□□ 1.11
SCARF1-206ENST00000573852 RGS22Q8NE09 1264 aa22.01■■□□□ 1.11
SCARF1-206ENST00000573852 PLA2G12BQ9BX93 195 aa22.01■■□□□ 1.11
SCARF1-206ENST00000573852 ZNF446Q9NWS9 450 aa22.01■■□□□ 1.11
SCARF1-206ENST00000573852 B4E1Z4 1266 aa22.01■■□□□ 1.11
SCARF1-206ENST00000573852 DHX8Q14562 1220 aaKnown RBP22.01■■□□□ 1.11
SCARF1-206ENST00000573852 NRDCO43847 1150 aa22■■□□□ 1.11
SCARF1-206ENST00000573852 APPP05067 770 aa22■■□□□ 1.11
SCARF1-206ENST00000573852 SLFN14P0C7P3 912 aa22■■□□□ 1.11
SCARF1-206ENST00000573852 MYL5Q02045 173 aa22■■□□□ 1.11
SCARF1-206ENST00000573852 GNL2Q13823 731 aaKnown RBP22■■□□□ 1.11
SCARF1-206ENST00000573852 NKX1-1Q15270 411 aaPredicted RBP22■■□□□ 1.11
SCARF1-206ENST00000573852 RESP18Q5W5W9 173 aa22■■□□□ 1.11
SCARF1-206ENST00000573852 MICU3Q86XE3 530 aa22■■□□□ 1.11
SCARF1-206ENST00000573852 PIH1D3Q9NQM4 214 aaKnown RBP22■■□□□ 1.11
SCARF1-206ENST00000573852 MYO5AQ9Y4I1 1855 aaKnown RBP22■■□□□ 1.11
SCARF1-206ENST00000573852 FAM237AA0A1B0GTK4 181 aa22■■□□□ 1.11
SCARF1-206ENST00000573852 UBE2Q2LH0YL09 131 aa22■■□□□ 1.11
SCARF1-206ENST00000573852 PTPN21Q16825 1174 aa22■■□□□ 1.11
SCARF1-206ENST00000573852 METTL16Q86W50 562 aaKnown RBP22■■□□□ 1.11
SCARF1-206ENST00000573852 FOXP4Q8IVH2 680 aaPredicted RBP22■■□□□ 1.11
SCARF1-206ENST00000573852 JMYQ8N9B5 988 aa22■■□□□ 1.11
SCARF1-206ENST00000573852 TNS2Q63HR2 1409 aa21.99■■□□□ 1.11
SCARF1-206ENST00000573852 WDR17Q8IZU2 1322 aa21.99■■□□□ 1.11
SCARF1-206ENST00000573852 A0A0U1RQG5 324 aaPredicted RBP21.99■■□□□ 1.11
SCARF1-206ENST00000573852 CDKL5O76039 1030 aa21.99■■□□□ 1.11
SCARF1-206ENST00000573852 SERPINC1P01008 464 aa21.99■■□□□ 1.11
SCARF1-206ENST00000573852 NTRK3Q16288 839 aa21.99■■□□□ 1.11
SCARF1-206ENST00000573852 LONRF3Q496Y0 759 aa21.99■■□□□ 1.11
SCARF1-206ENST00000573852 ZNF771Q7L3S4 317 aaPredicted RBP21.99■■□□□ 1.11
SCARF1-206ENST00000573852 HOMER1Q86YM7 354 aa21.99■■□□□ 1.11
SCARF1-206ENST00000573852 ZBTB38Q8NAP3 1195 aaPredicted RBP21.99■■□□□ 1.11
SCARF1-206ENST00000573852 RANBP6O60518 1105 aaKnown RBP21.99■■□□□ 1.11
SCARF1-206ENST00000573852 GOLGA8FQ08AF8 430 aa21.99■■□□□ 1.11
SCARF1-206ENST00000573852 GOLGA8DPQ0D2H9 430 aa21.99■■□□□ 1.11
SCARF1-206ENST00000573852 LDHAL6AQ6ZMR3 332 aa21.99■■□□□ 1.11
SCARF1-206ENST00000573852 INCENPQ9NQS7 918 aa21.99■■□□□ 1.11
SCARF1-206ENST00000573852 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.99■■□□□ 1.11
SCARF1-206ENST00000573852 ETF1P62495 437 aaKnown RBP21.98■■□□□ 1.11
SCARF1-206ENST00000573852 IGDCC4Q8TDY8 1250 aa21.98■■□□□ 1.11
SCARF1-206ENST00000573852 MYL10Q9BUA6 226 aa21.98■■□□□ 1.11
SCARF1-206ENST00000573852 TMX1Q9H3N1 280 aa21.98■■□□□ 1.11
SCARF1-206ENST00000573852 FAM217BQ9NTX9 383 aaPredicted RBP21.98■■□□□ 1.11
SCARF1-206ENST00000573852 ECM29Q5VYK3 1845 aa21.98■■□□□ 1.11
SCARF1-206ENST00000573852 TMEM232C9JQI7 657 aa21.98■■□□□ 1.11
SCARF1-206ENST00000573852 IDH1O75874 414 aaKnown RBP21.98■■□□□ 1.11
SCARF1-206ENST00000573852 H2AFXP16104 143 aaPredicted RBP21.98■■□□□ 1.11
SCARF1-206ENST00000573852 CFAP100Q494V2 611 aa21.98■■□□□ 1.11
SCARF1-206ENST00000573852 GREM2Q9H772 168 aa21.98■■□□□ 1.11
SCARF1-206ENST00000573852 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.97■■□□□ 1.11
SCARF1-206ENST00000573852 FANCLQ9NW38 375 aa21.97■■□□□ 1.11
SCARF1-206ENST00000573852 DNAI1Q9UI46 699 aa21.97■■□□□ 1.11
SCARF1-206ENST00000573852 ZNF532Q9HCE3 1301 aa21.97■■□□□ 1.11
SCARF1-206ENST00000573852 ZBTB43O43298 467 aa21.97■■□□□ 1.11
SCARF1-206ENST00000573852 ITGA6P23229 1130 aa21.97■■□□□ 1.11
SCARF1-206ENST00000573852 IARSP41252 1262 aaKnown RBP21.97■■□□□ 1.11
SCARF1-206ENST00000573852 TRIM65Q6PJ69 517 aa21.97■■□□□ 1.11
SCARF1-206ENST00000573852 CPLX2Q6PUV4 134 aaKnown RBP21.97■■□□□ 1.11
SCARF1-206ENST00000573852 VSTM4Q8IW00 320 aa21.97■■□□□ 1.11
SCARF1-206ENST00000573852 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.97■■□□□ 1.11
SCARF1-206ENST00000573852 ATRNO75882 1429 aa21.97■■□□□ 1.11
SCARF1-206ENST00000573852 UBN2Q6ZU65 1347 aa21.96■■□□□ 1.11
SCARF1-206ENST00000573852 CBFA2T2O43439 604 aa21.96■■□□□ 1.11
SCARF1-206ENST00000573852 TUBB4AP04350 444 aa21.96■■□□□ 1.11
SCARF1-206ENST00000573852 KRBA2Q6ZNG9 492 aa21.96■■□□□ 1.11
SCARF1-206ENST00000573852 LY9Q9HBG7 655 aa21.96■■□□□ 1.11
SCARF1-206ENST00000573852 PCDHA5Q9Y5H7 936 aa21.96■■□□□ 1.11
SCARF1-206ENST00000573852 FANCGO15287 622 aa21.96■■□□□ 1.11
SCARF1-206ENST00000573852 CUTAO60888 179 aa21.96■■□□□ 1.11
SCARF1-206ENST00000573852 BMP6P22004 513 aa21.96■■□□□ 1.11
SCARF1-206ENST00000573852 PDE4BQ07343 736 aa21.96■■□□□ 1.11
SCARF1-206ENST00000573852 TTLL11Q8NHH1 800 aa21.96■■□□□ 1.11
SCARF1-206ENST00000573852 UTP14AQ9BVJ6 771 aaKnown RBP21.96■■□□□ 1.11
SCARF1-206ENST00000573852 KCNH3Q9ULD8 1083 aa21.96■■□□□ 1.11
SCARF1-206ENST00000573852 FOXN1O15353 648 aa21.95■■□□□ 1.1
SCARF1-206ENST00000573852 UBE3CQ15386 1083 aa21.95■■□□□ 1.1
SCARF1-206ENST00000573852 TERF2Q15554 542 aa21.95■■□□□ 1.1
SCARF1-206ENST00000573852 KIF6Q6ZMV9 814 aa21.95■■□□□ 1.1
SCARF1-206ENST00000573852 NFXL1Q6ZNB6 911 aa21.95■■□□□ 1.1
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