RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 RAD17O75943 681 aa14.22□□□□□ -0.13
CDRT1-206ENST00000571263 USP17L8P0C7I0 530 aa14.22□□□□□ -0.13
CDRT1-206ENST00000571263 PSMA5P28066 241 aa14.22□□□□□ -0.13
CDRT1-206ENST00000571263 NT5C2P49902 561 aa14.22□□□□□ -0.13
CDRT1-206ENST00000571263 RASSF7Q02833 373 aa14.22□□□□□ -0.13
CDRT1-206ENST00000571263 SLFNL1Q499Z3 407 aa14.22□□□□□ -0.13
CDRT1-206ENST00000571263 ADGRA1Q86SQ6 560 aa14.22□□□□□ -0.13
CDRT1-206ENST00000571263 KIAA0825Q8IV33 1275 aa14.22□□□□□ -0.13
CDRT1-206ENST00000571263 AMOTL1Q8IY63 956 aa14.22□□□□□ -0.13
CDRT1-206ENST00000571263 IFNL3Q8IZI9 196 aa14.22□□□□□ -0.13
CDRT1-206ENST00000571263 LCORLQ8N3X6 602 aa14.22□□□□□ -0.13
CDRT1-206ENST00000571263 GMLQ99445 158 aa14.22□□□□□ -0.13
CDRT1-206ENST00000571263 NAPBQ9H115 298 aa14.22□□□□□ -0.13
CDRT1-206ENST00000571263 AATFQ9NY61 560 aaKnown RBP eCLIP14.22□□□□□ -0.13
CDRT1-206ENST00000571263 RBM19Q9Y4C8 960 aaKnown RBP14.22□□□□□ -0.13
CDRT1-206ENST00000571263 MYO5AQ9Y4I1 1855 aaKnown RBP14.21□□□□□ -0.13
CDRT1-206ENST00000571263 F8W031 263 aaPredicted RBP14.21□□□□□ -0.13
CDRT1-206ENST00000571263 ZNF213O14771 459 aa14.21□□□□□ -0.13
CDRT1-206ENST00000571263 FGAP02671 866 aa14.21□□□□□ -0.13
CDRT1-206ENST00000571263 YBX3P16989 372 aaKnown RBP eCLIP14.21□□□□□ -0.13
CDRT1-206ENST00000571263 ANP32AP39687 249 aaKnown RBP14.21□□□□□ -0.13
CDRT1-206ENST00000571263 BTDP43251 543 aa14.21□□□□□ -0.13
CDRT1-206ENST00000571263 CRKP46108 304 aa14.21□□□□□ -0.13
CDRT1-206ENST00000571263 DIXDC1Q155Q3 683 aa14.21□□□□□ -0.13
CDRT1-206ENST00000571263 GRIK5Q16478 980 aa14.21□□□□□ -0.13
CDRT1-206ENST00000571263 MTMR14Q8NCE2 650 aa14.21□□□□□ -0.13
CDRT1-206ENST00000571263 TAOK2Q9UL54 1235 aa14.21□□□□□ -0.13
CDRT1-206ENST00000571263 DAGLAQ9Y4D2 1042 aa14.21□□□□□ -0.13
CDRT1-206ENST00000571263 GSG1L2A8MUP6 293 aa14.2□□□□□ -0.14
CDRT1-206ENST00000571263 NPM3O75607 178 aaKnown RBP14.2□□□□□ -0.14
CDRT1-206ENST00000571263 HMGB1P09429 215 aaKnown RBP14.2□□□□□ -0.14
CDRT1-206ENST00000571263 TDO2P48775 406 aa14.2□□□□□ -0.14
CDRT1-206ENST00000571263 RBM5P52756 815 aaKnown RBP eCLIP14.2□□□□□ -0.14
CDRT1-206ENST00000571263 RABEP1Q15276 862 aa14.2□□□□□ -0.14
CDRT1-206ENST00000571263 CREB3L3Q68CJ9 461 aa14.2□□□□□ -0.14
CDRT1-206ENST00000571263 GPC2Q8N158 579 aa14.2□□□□□ -0.14
CDRT1-206ENST00000571263 TM6SF1Q9BZW5 370 aa14.2□□□□□ -0.14
CDRT1-206ENST00000571263 SLC27A2O14975 620 aa14.19□□□□□ -0.14
CDRT1-206ENST00000571263 SLC3A2P08195 630 aaKnown RBP14.19□□□□□ -0.14
CDRT1-206ENST00000571263 PCP11498 1178 aaKnown RBP14.19□□□□□ -0.14
CDRT1-206ENST00000571263 USP5P45974 858 aa14.19□□□□□ -0.14
CDRT1-206ENST00000571263 DYNLL1P63167 89 aaKnown RBP14.19□□□□□ -0.14
CDRT1-206ENST00000571263 DLGAP5Q15398 846 aa14.19□□□□□ -0.14
CDRT1-206ENST00000571263 SBK1Q52WX2 424 aa14.19□□□□□ -0.14
CDRT1-206ENST00000571263 VPS53Q5VIR6 699 aa14.19□□□□□ -0.14
CDRT1-206ENST00000571263 DPY19L2Q6NUT2 758 aa14.19□□□□□ -0.14
CDRT1-206ENST00000571263 MXD3Q9BW11 206 aa14.19□□□□□ -0.14
CDRT1-206ENST00000571263 ARPP21Q9UBL0 812 aaPredicted RBP14.19□□□□□ -0.14
CDRT1-206ENST00000571263 SCN9AQ15858 1988 aa14.18□□□□□ -0.14
CDRT1-206ENST00000571263 COL4A5P29400 1685 aa14.18□□□□□ -0.14
CDRT1-206ENST00000571263 DICER1Q9UPY3 1922 aaKnown RBP14.18□□□□□ -0.14
CDRT1-206ENST00000571263 MYO1BO43795 1136 aa14.18□□□□□ -0.14
CDRT1-206ENST00000571263 SCNN1DP51172 638 aa14.18□□□□□ -0.14
CDRT1-206ENST00000571263 APOBEC3HQ6NTF7 200 aaKnown RBP14.18□□□□□ -0.14
CDRT1-206ENST00000571263 TEX11Q8IYF3 940 aa14.18□□□□□ -0.14
CDRT1-206ENST00000571263 RNF41Q9H4P4 317 aaPredicted RBP14.18□□□□□ -0.14
CDRT1-206ENST00000571263 USP40Q9NVE5 1235 aa14.18□□□□□ -0.14
CDRT1-206ENST00000571263 TMOD2Q9NZR1 351 aa14.18□□□□□ -0.14
CDRT1-206ENST00000571263 RNF181Q9P0P0 153 aa14.18□□□□□ -0.14
CDRT1-206ENST00000571263 SNX14Q9Y5W7 946 aa14.18□□□□□ -0.14
CDRT1-206ENST00000571263 MYH2Q9UKX2 1941 aa14.17□□□□□ -0.14
CDRT1-206ENST00000571263 H7C1D1 291 aa14.17□□□□□ -0.14
CDRT1-206ENST00000571263 CYP21A2P08686 494 aa14.17□□□□□ -0.14
CDRT1-206ENST00000571263 PRELPP51888 382 aa14.17□□□□□ -0.14
CDRT1-206ENST00000571263 RHBDL3P58872 404 aa14.17□□□□□ -0.14
CDRT1-206ENST00000571263 ZNF280AP59817 542 aaPredicted RBP14.17□□□□□ -0.14
CDRT1-206ENST00000571263 TRDNQ13061 729 aa14.17□□□□□ -0.14
CDRT1-206ENST00000571263 CFAP100Q494V2 611 aa14.17□□□□□ -0.14
CDRT1-206ENST00000571263 C9orf131Q5VYM1 1079 aa14.17□□□□□ -0.14
CDRT1-206ENST00000571263 SH3RF3Q8TEJ3 882 aaPredicted RBP14.17□□□□□ -0.14
CDRT1-206ENST00000571263 ZNF287Q9HBT7 754 aa14.17□□□□□ -0.14
CDRT1-206ENST00000571263 DCP1AQ9NPI6 582 aaPredicted RBP14.17□□□□□ -0.14
CDRT1-206ENST00000571263 ANAPC4Q9UJX5 808 aa14.17□□□□□ -0.14
CDRT1-206ENST00000571263 ZNF646O15015 1829 aaPredicted RBP14.17□□□□□ -0.14
CDRT1-206ENST00000571263 FOXP2O15409 715 aa14.16□□□□□ -0.14
CDRT1-206ENST00000571263 PRKAB2O43741 272 aa14.16□□□□□ -0.14
CDRT1-206ENST00000571263 ST18O60284 1047 aa14.16□□□□□ -0.14
CDRT1-206ENST00000571263 MCM2P49736 904 aa14.16□□□□□ -0.14
CDRT1-206ENST00000571263 FKBP1CQ5VVH2 108 aa14.16□□□□□ -0.14
CDRT1-206ENST00000571263 CDC42EP5Q6NZY7 148 aa14.16□□□□□ -0.14
CDRT1-206ENST00000571263 TTC6Q86TZ1 520 aa14.16□□□□□ -0.14
CDRT1-206ENST00000571263 SDR42E1Q8WUS8 393 aa14.16□□□□□ -0.14
CDRT1-206ENST00000571263 IDI2Q9BXS1 227 aa14.16□□□□□ -0.14
CDRT1-206ENST00000571263 CNNM2Q9H8M5 875 aa14.16□□□□□ -0.14
CDRT1-206ENST00000571263 ZBTB12Q9Y330 459 aaPredicted RBP14.16□□□□□ -0.14
CDRT1-206ENST00000571263 GJA3Q9Y6H8 435 aa14.16□□□□□ -0.14
CDRT1-206ENST00000571263 SBF1O95248 1867 aa14.15□□□□□ -0.14
CDRT1-206ENST00000571263 ENTPD3O75355 529 aa14.15□□□□□ -0.14
CDRT1-206ENST00000571263 BECN1Q14457 450 aa14.15□□□□□ -0.14
CDRT1-206ENST00000571263 TGFBRAP1Q8WUH2 860 aa14.15□□□□□ -0.14
CDRT1-206ENST00000571263 NEK1Q96PY6 1258 aa14.15□□□□□ -0.14
CDRT1-206ENST00000571263 KRT23Q9C075 422 aa14.15□□□□□ -0.14
CDRT1-206ENST00000571263 DHX36Q9H2U1 1008 aaKnown RBP14.15□□□□□ -0.14
CDRT1-206ENST00000571263 ZSWIM6Q9HCJ5 1215 aa14.15□□□□□ -0.14
CDRT1-206ENST00000571263 MYOZ2Q9NPC6 264 aa14.15□□□□□ -0.14
CDRT1-206ENST00000571263 MCM9Q9NXL9 1143 aa14.15□□□□□ -0.14
CDRT1-206ENST00000571263 MKRN1Q9UHC7 482 aaKnown RBP14.15□□□□□ -0.14
CDRT1-206ENST00000571263 CNOT7Q9UIV1 285 aaKnown RBP14.15□□□□□ -0.14
CDRT1-206ENST00000571263 CYP46A1Q9Y6A2 500 aa14.15□□□□□ -0.14
CDRT1-206ENST00000571263 SPDYE2BA6NHP3 402 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms