RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 EMILIN2Q9BXX0 1053 aa7.1□□□□□ -1.27
NUP88-202ENST00000570937 GSX1Q9H4S2 264 aaPredicted RBP7.1□□□□□ -1.27
NUP88-202ENST00000570937 CCDC86Q9H6F5 360 aaKnown RBP7.1□□□□□ -1.27
NUP88-202ENST00000570937 STOML1Q9UBI4 398 aa7.1□□□□□ -1.27
NUP88-202ENST00000570937 PARP2Q9UGN5 583 aa7.1□□□□□ -1.27
NUP88-202ENST00000570937 GSC2O15499 205 aa7.09□□□□□ -1.27
NUP88-202ENST00000570937 FSTP19883 344 aa7.09□□□□□ -1.27
NUP88-202ENST00000570937 HNRNPUQ00839 825 aaKnown RBP eCLIP7.09□□□□□ -1.27
NUP88-202ENST00000570937 ZNF252P-AS1Q0IIN9 211 aa7.09□□□□□ -1.27
NUP88-202ENST00000570937 PDE3AQ14432 1141 aa7.09□□□□□ -1.27
NUP88-202ENST00000570937 TPTE2Q6XPS3 522 aa7.09□□□□□ -1.27
NUP88-202ENST00000570937 TMC4Q7Z404 712 aa7.09□□□□□ -1.27
NUP88-202ENST00000570937 STK35Q8TDR2 534 aa7.09□□□□□ -1.27
NUP88-202ENST00000570937 CACNA2D2Q9NY47 1150 aa7.09□□□□□ -1.27
NUP88-202ENST00000570937 ZNF862O60290 1169 aa7.08□□□□□ -1.28
NUP88-202ENST00000570937 BMP6P22004 513 aa7.08□□□□□ -1.28
NUP88-202ENST00000570937 KIF4BQ2VIQ3 1234 aa7.08□□□□□ -1.28
NUP88-202ENST00000570937 SGO2Q562F6 1265 aa7.08□□□□□ -1.28
NUP88-202ENST00000570937 TMCO4Q5TGY1 634 aa7.08□□□□□ -1.28
NUP88-202ENST00000570937 BEND4Q6ZU67 534 aa7.08□□□□□ -1.28
NUP88-202ENST00000570937 EZH1Q92800 747 aaPredicted RBP7.08□□□□□ -1.28
NUP88-202ENST00000570937 C7orf69Q9H7B7 122 aa7.08□□□□□ -1.28
NUP88-202ENST00000570937 RAD18Q9NS91 495 aa7.08□□□□□ -1.28
NUP88-202ENST00000570937 SAMM50Q9Y512 469 aa7.08□□□□□ -1.28
NUP88-202ENST00000570937 PAGE1O75459 146 aa7.07□□□□□ -1.28
NUP88-202ENST00000570937 LIG1P18858 919 aa7.07□□□□□ -1.28
NUP88-202ENST00000570937 MAP4P27816 1152 aaKnown RBP7.07□□□□□ -1.28
NUP88-202ENST00000570937 AKAP4Q5JQC9 854 aa7.07□□□□□ -1.28
NUP88-202ENST00000570937 SCARA3Q6AZY7 606 aa7.07□□□□□ -1.28
NUP88-202ENST00000570937 SV2BQ7L1I2 683 aa7.07□□□□□ -1.28
NUP88-202ENST00000570937 TRIM42Q8IWZ5 723 aa7.07□□□□□ -1.28
NUP88-202ENST00000570937 WDR89Q96FK6 387 aaPredicted RBP7.07□□□□□ -1.28
NUP88-202ENST00000570937 PCDHGC5Q9Y5F6 944 aa7.07□□□□□ -1.28
NUP88-202ENST00000570937 ACTL7BQ9Y614 415 aa7.07□□□□□ -1.28
NUP88-202ENST00000570937 HMX2A2RU54 273 aa7.06□□□□□ -1.28
NUP88-202ENST00000570937 TMPRSS2O15393 492 aa7.06□□□□□ -1.28
NUP88-202ENST00000570937 FBXO24O75426 580 aa7.06□□□□□ -1.28
NUP88-202ENST00000570937 IGLV1-40P01703 118 aa7.06□□□□□ -1.28
NUP88-202ENST00000570937 SLFN14P0C7P3 912 aa7.06□□□□□ -1.28
NUP88-202ENST00000570937 XPCQ01831 940 aaPredicted RBP7.06□□□□□ -1.28
NUP88-202ENST00000570937 NFIAQ12857 509 aa7.06□□□□□ -1.28
NUP88-202ENST00000570937 PSMD2Q13200 908 aa7.06□□□□□ -1.28
NUP88-202ENST00000570937 ZMYM1Q5SVZ6 1142 aa7.06□□□□□ -1.28
NUP88-202ENST00000570937 RNF43Q68DV7 783 aa7.06□□□□□ -1.28
NUP88-202ENST00000570937 CDPF1Q6NVV7 123 aa7.06□□□□□ -1.28
NUP88-202ENST00000570937 Q8N3U1 123 aa7.06□□□□□ -1.28
NUP88-202ENST00000570937 YIPF2Q9BWQ6 316 aa7.06□□□□□ -1.28
NUP88-202ENST00000570937 ZC3H12CQ9C0D7 883 aaKnown RBP7.06□□□□□ -1.28
NUP88-202ENST00000570937 KCNF1Q9H3M0 494 aa7.06□□□□□ -1.28
NUP88-202ENST00000570937 TTF2Q9UNY4 1162 aaKnown RBP7.06□□□□□ -1.28
NUP88-202ENST00000570937 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.05□□□□□ -1.28
NUP88-202ENST00000570937 CELA3AP09093 270 aa7.05□□□□□ -1.28
NUP88-202ENST00000570937 USP11P51784 963 aa7.05□□□□□ -1.28
NUP88-202ENST00000570937 TAGLNQ01995 201 aaKnown RBP7.05□□□□□ -1.28
NUP88-202ENST00000570937 KRTAP1-3Q8IUG1 177 aa7.05□□□□□ -1.28
NUP88-202ENST00000570937 KCNB2Q92953 911 aa7.05□□□□□ -1.28
NUP88-202ENST00000570937 DBNDD2Q9BQY9 259 aa7.05□□□□□ -1.28
NUP88-202ENST00000570937 ACSS3Q9H6R3 686 aa7.05□□□□□ -1.28
NUP88-202ENST00000570937 CRIM1Q9NZV1 1036 aa7.05□□□□□ -1.28
NUP88-202ENST00000570937 PPP1R9AQ9ULJ8 1098 aa7.05□□□□□ -1.28
NUP88-202ENST00000570937 AP4E1Q9UPM8 1137 aa7.05□□□□□ -1.28
NUP88-202ENST00000570937 TRIM37O94972 964 aa7.04□□□□□ -1.28
NUP88-202ENST00000570937 ID3Q02535 119 aa7.04□□□□□ -1.28
NUP88-202ENST00000570937 LRRC14Q15048 493 aa7.04□□□□□ -1.28
NUP88-202ENST00000570937 MAP1SQ66K74 1059 aaPredicted RBP7.04□□□□□ -1.28
NUP88-202ENST00000570937 DYMQ7RTS9 669 aa7.04□□□□□ -1.28
NUP88-202ENST00000570937 FBLIM1Q8WUP2 373 aa7.04□□□□□ -1.28
NUP88-202ENST00000570937 FAM105AQ9NUU6 356 aa7.04□□□□□ -1.28
NUP88-202ENST00000570937 RNF112Q9ULX5 631 aa7.04□□□□□ -1.28
NUP88-202ENST00000570937 CYP8B1Q9UNU6 501 aa7.04□□□□□ -1.28
NUP88-202ENST00000570937 FAM95CA0A1B0GW59 222 aa7.03□□□□□ -1.28
NUP88-202ENST00000570937 CTSHP09668 335 aa7.03□□□□□ -1.28
NUP88-202ENST00000570937 RXRBP28702 533 aa7.03□□□□□ -1.28
NUP88-202ENST00000570937 ITGAEP38570 1179 aa7.03□□□□□ -1.28
NUP88-202ENST00000570937 ASPAP45381 313 aa7.03□□□□□ -1.28
NUP88-202ENST00000570937 ST13P50502 369 aaKnown RBP7.03□□□□□ -1.28
NUP88-202ENST00000570937 RASIP1Q5U651 963 aa7.03□□□□□ -1.28
NUP88-202ENST00000570937 PCNX4Q63HM2 1172 aa7.03□□□□□ -1.28
NUP88-202ENST00000570937 LLGL2Q6P1M3 1020 aa7.03□□□□□ -1.28
NUP88-202ENST00000570937 GRIN3AQ8TCU5 1115 aa7.03□□□□□ -1.28
NUP88-202ENST00000570937 GPBAR1Q8TDU6 330 aa7.03□□□□□ -1.28
NUP88-202ENST00000570937 FAM161BQ96MY7 647 aa7.03□□□□□ -1.28
NUP88-202ENST00000570937 BCL2L13Q9BXK5 485 aa7.03□□□□□ -1.28
NUP88-202ENST00000570937 ATXN3LQ9H3M9 355 aa7.03□□□□□ -1.28
NUP88-202ENST00000570937 SEMA6CQ9H3T2 930 aa7.03□□□□□ -1.28
NUP88-202ENST00000570937 CBX8Q9HC52 389 aa7.03□□□□□ -1.28
NUP88-202ENST00000570937 SORBS3O60504 671 aa7.02□□□□□ -1.29
NUP88-202ENST00000570937 RPS26P62854 115 aaKnown RBP7.02□□□□□ -1.29
NUP88-202ENST00000570937 CCDC85BQ15834 202 aaPredicted RBP7.02□□□□□ -1.29
NUP88-202ENST00000570937 ZC3H12AQ5D1E8 599 aaKnown RBP7.02□□□□□ -1.29
NUP88-202ENST00000570937 PAOXQ6QHF9 649 aa7.02□□□□□ -1.29
NUP88-202ENST00000570937 ZDHHC13Q8IUH4 622 aa7.02□□□□□ -1.29
NUP88-202ENST00000570937 CRELD1Q96HD1 420 aa7.02□□□□□ -1.29
NUP88-202ENST00000570937 FANCD2OSQ96PS1 177 aa7.02□□□□□ -1.29
NUP88-202ENST00000570937 DISC1Q9NRI5 854 aa7.02□□□□□ -1.29
NUP88-202ENST00000570937 USP31Q70CQ4 1352 aa7.02□□□□□ -1.29
NUP88-202ENST00000570937 MFAP1P55081 439 aaKnown RBP7.01□□□□□ -1.29
NUP88-202ENST00000570937 ERVK-24P63145 666 aa7.01□□□□□ -1.29
NUP88-202ENST00000570937 MAP7Q14244 749 aa7.01□□□□□ -1.29
NUP88-202ENST00000570937 TAF1CQ15572 869 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms