RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 APOBEC3HQ6NTF7 200 aaKnown RBP15.81■□□□□ 0.12
CNOT1-217ENST00000569263 TMED8Q6PL24 325 aaPredicted RBP15.81■□□□□ 0.12
CNOT1-217ENST00000569263 KRT26Q7Z3Y9 468 aa15.81■□□□□ 0.12
CNOT1-217ENST00000569263 CNTROBQ8N137 903 aa15.81■□□□□ 0.12
CNOT1-217ENST00000569263 KBTBD3Q8NAB2 608 aa15.81■□□□□ 0.12
CNOT1-217ENST00000569263 ZNF384Q8TF68 577 aa15.81■□□□□ 0.12
CNOT1-217ENST00000569263 FSD1Q9BTV5 496 aa15.81■□□□□ 0.12
CNOT1-217ENST00000569263 ZNF70Q9UC06 446 aaPredicted RBP15.81■□□□□ 0.12
CNOT1-217ENST00000569263 TRPM7Q96QT4 1865 aa15.8■□□□□ 0.12
CNOT1-217ENST00000569263 TRIM6-TRIM34B2RNG4 842 aa15.8■□□□□ 0.12
CNOT1-217ENST00000569263 BAG3O95817 575 aa15.8■□□□□ 0.12
CNOT1-217ENST00000569263 PDE6AP16499 860 aa15.8■□□□□ 0.12
CNOT1-217ENST00000569263 TNFAIP1Q13829 316 aa15.8■□□□□ 0.12
CNOT1-217ENST00000569263 LRRFIP1Q32MZ4 808 aaKnown RBP15.8■□□□□ 0.12
CNOT1-217ENST00000569263 CDC37L1Q7L3B6 337 aa15.8■□□□□ 0.12
CNOT1-217ENST00000569263 FAM163AQ96GL9 167 aaPredicted RBP15.8■□□□□ 0.12
CNOT1-217ENST00000569263 GLIS2Q9BZE0 524 aaPredicted RBP15.8■□□□□ 0.12
CNOT1-217ENST00000569263 CDK5RAP2Q96SN8 1893 aa15.8■□□□□ 0.12
CNOT1-217ENST00000569263 ZNF532Q9HCE3 1301 aa15.79■□□□□ 0.12
CNOT1-217ENST00000569263 GPR75-ASB3A0A0A6YYF3 556 aa15.79■□□□□ 0.12
CNOT1-217ENST00000569263 ADM5C9JUS6 153 aa15.79■□□□□ 0.12
CNOT1-217ENST00000569263 TNNI2P48788 182 aa15.79■□□□□ 0.12
CNOT1-217ENST00000569263 CDC42EP5Q6NZY7 148 aa15.79■□□□□ 0.12
CNOT1-217ENST00000569263 USP48Q86UV5 1035 aa15.79■□□□□ 0.12
CNOT1-217ENST00000569263 EVI5LQ96CN4 794 aa15.79■□□□□ 0.12
CNOT1-217ENST00000569263 USP40Q9NVE5 1235 aa15.79■□□□□ 0.12
CNOT1-217ENST00000569263 AATFQ9NY61 560 aaKnown RBP eCLIP15.79■□□□□ 0.12
CNOT1-217ENST00000569263 FOCADQ5VW36 1801 aa15.78■□□□□ 0.12
CNOT1-217ENST00000569263 TCP10L2B9ZVM9 353 aa15.78■□□□□ 0.12
CNOT1-217ENST00000569263 PLCG2P16885 1265 aa15.78■□□□□ 0.12
CNOT1-217ENST00000569263 ADD2P35612 726 aa15.78■□□□□ 0.12
CNOT1-217ENST00000569263 CACNB3P54284 484 aa15.78■□□□□ 0.12
CNOT1-217ENST00000569263 ADGRA1Q86SQ6 560 aa15.78■□□□□ 0.12
CNOT1-217ENST00000569263 MIGA1Q8NAN2 632 aa15.78■□□□□ 0.12
CNOT1-217ENST00000569263 RILPL2Q969X0 211 aa15.78■□□□□ 0.12
CNOT1-217ENST00000569263 SCAF8Q9UPN6 1271 aaKnown RBP15.78■□□□□ 0.12
CNOT1-217ENST00000569263 ZFYP08048 801 aaPredicted RBP15.77■□□□□ 0.12
CNOT1-217ENST00000569263 TTC22Q5TAA0 569 aa15.77■□□□□ 0.12
CNOT1-217ENST00000569263 CERS3Q8IU89 383 aa15.77■□□□□ 0.12
CNOT1-217ENST00000569263 NAV1Q8NEY1 1877 aa15.76■□□□□ 0.11
CNOT1-217ENST00000569263 TCRBV5S4A2TA0A5A2 114 aa15.76■□□□□ 0.11
CNOT1-217ENST00000569263 TRAF5O00463 557 aa15.76■□□□□ 0.11
CNOT1-217ENST00000569263 ITGBL1O95965 494 aaPredicted RBP15.76■□□□□ 0.11
CNOT1-217ENST00000569263 RGS3P49796 1198 aa15.76■□□□□ 0.11
CNOT1-217ENST00000569263 UBE3CQ15386 1083 aa15.76■□□□□ 0.11
CNOT1-217ENST00000569263 TEX11Q8IYF3 940 aa15.76■□□□□ 0.11
CNOT1-217ENST00000569263 PPP2R3BQ9Y5P8 575 aa15.76■□□□□ 0.11
CNOT1-217ENST00000569263 MAGEB6P1A0A0J9YX57 407 aa15.75■□□□□ 0.11
CNOT1-217ENST00000569263 RNF113AO15541 343 aaKnown RBP15.75■□□□□ 0.11
CNOT1-217ENST00000569263 RHBDL3P58872 404 aa15.75■□□□□ 0.11
CNOT1-217ENST00000569263 PPP4CP60510 307 aa15.75■□□□□ 0.11
CNOT1-217ENST00000569263 DYNLL1P63167 89 aaKnown RBP15.75■□□□□ 0.11
CNOT1-217ENST00000569263 PICALMQ13492 652 aa15.75■□□□□ 0.11
CNOT1-217ENST00000569263 FKBP1CQ5VVH2 108 aa15.75■□□□□ 0.11
CNOT1-217ENST00000569263 SH3RF3Q8TEJ3 882 aaPredicted RBP15.75■□□□□ 0.11
CNOT1-217ENST00000569263 CDCA5Q96FF9 252 aa15.75■□□□□ 0.11
CNOT1-217ENST00000569263 DEFB129Q9H1M3 183 aa15.75■□□□□ 0.11
CNOT1-217ENST00000569263 ZNF408Q9H9D4 720 aa15.75■□□□□ 0.11
CNOT1-217ENST00000569263 RFX7Q2KHR2 1363 aa15.75■□□□□ 0.11
CNOT1-217ENST00000569263 NF2P35240 595 aa15.74■□□□□ 0.11
CNOT1-217ENST00000569263 TCP10Q12799 353 aa15.74■□□□□ 0.11
CNOT1-217ENST00000569263 RASA3Q14644 834 aa15.74■□□□□ 0.11
CNOT1-217ENST00000569263 SLFNL1Q499Z3 407 aa15.74■□□□□ 0.11
CNOT1-217ENST00000569263 FAM83AQ86UY5 434 aa15.74■□□□□ 0.11
CNOT1-217ENST00000569263 SKAP1Q86WV1 359 aa15.74■□□□□ 0.11
CNOT1-217ENST00000569263 APPBP2Q92624 585 aa15.74■□□□□ 0.11
CNOT1-217ENST00000569263 AIDAQ96BJ3 306 aa15.74■□□□□ 0.11
CNOT1-217ENST00000569263 CNTNAP1P78357 1384 aa15.74■□□□□ 0.11
CNOT1-217ENST00000569263 PASKQ96RG2 1323 aa15.73■□□□□ 0.11
CNOT1-217ENST00000569263 MYH1P12882 1939 aa15.73■□□□□ 0.11
CNOT1-217ENST00000569263 WDHD1O75717 1129 aaPredicted RBP15.73■□□□□ 0.11
CNOT1-217ENST00000569263 MBD4O95243 580 aa15.73■□□□□ 0.11
CNOT1-217ENST00000569263 CHGBP05060 677 aa15.73■□□□□ 0.11
CNOT1-217ENST00000569263 GSPT1P15170 499 aaKnown RBP15.73■□□□□ 0.11
CNOT1-217ENST00000569263 C1QTNF8P60827 252 aa15.73■□□□□ 0.11
CNOT1-217ENST00000569263 NFIAQ12857 509 aa15.73■□□□□ 0.11
CNOT1-217ENST00000569263 PRAMEF18Q5VWM3 479 aa15.73■□□□□ 0.11
CNOT1-217ENST00000569263 DLK2Q6UY11 383 aa15.73■□□□□ 0.11
CNOT1-217ENST00000569263 RIOK1Q9BRS2 568 aaKnown RBP15.73■□□□□ 0.11
CNOT1-217ENST00000569263 IDI2Q9BXS1 227 aa15.73■□□□□ 0.11
CNOT1-217ENST00000569263 CRNKL1Q9BZJ0 848 aaKnown RBP15.73■□□□□ 0.11
CNOT1-217ENST00000569263 TMEM39BQ9GZU3 492 aa15.73■□□□□ 0.11
CNOT1-217ENST00000569263 RPAP1Q9BWH6 1393 aaPredicted RBP15.73■□□□□ 0.11
CNOT1-217ENST00000569263 ENTPD3O75355 529 aa15.72■□□□□ 0.11
CNOT1-217ENST00000569263 CELF2O95319 508 aaKnown RBP15.72■□□□□ 0.11
CNOT1-217ENST00000569263 USP5P45974 858 aa15.72■□□□□ 0.11
CNOT1-217ENST00000569263 FMR1Q06787 632 aaKnown RBP eCLIP15.72■□□□□ 0.11
CNOT1-217ENST00000569263 TICAM2Q86XR7 235 aa15.72■□□□□ 0.11
CNOT1-217ENST00000569263 LCORLQ8N3X6 602 aa15.72■□□□□ 0.11
CNOT1-217ENST00000569263 TGFBRAP1Q8WUH2 860 aa15.72■□□□□ 0.11
CNOT1-217ENST00000569263 FAM151AQ8WW52 585 aa15.72■□□□□ 0.11
CNOT1-217ENST00000569263 ARMT1Q9H993 441 aa15.72■□□□□ 0.11
CNOT1-217ENST00000569263 FAM198AQ9UFP1 575 aa15.72■□□□□ 0.11
CNOT1-217ENST00000569263 HIP1O00291 1037 aa15.71■□□□□ 0.11
CNOT1-217ENST00000569263 SDSP20132 328 aa15.71■□□□□ 0.11
CNOT1-217ENST00000569263 MAPKAPK5Q8IW41 473 aa15.71■□□□□ 0.11
CNOT1-217ENST00000569263 ZSCAN29Q8IWY8 852 aaPredicted RBP15.71■□□□□ 0.11
CNOT1-217ENST00000569263 PUS7LQ9H0K6 701 aaKnown RBP15.71■□□□□ 0.11
CNOT1-217ENST00000569263 DDX4Q9NQI0 724 aaKnown RBP15.71■□□□□ 0.11
CNOT1-217ENST00000569263 DIAPH3Q9NSV4 1193 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms