RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 KIF3AQ9Y496 699 aa18.29■□□□□ 0.52
SNX20-204ENST00000568993 ANKRD31Q8N7Z5 1873 aa18.29■□□□□ 0.52
SNX20-204ENST00000568993 NEDD4P46934 1319 aa18.29■□□□□ 0.52
SNX20-204ENST00000568993 CCT2P78371 535 aaKnown RBP18.28■□□□□ 0.52
SNX20-204ENST00000568993 L1TD1Q5T7N2 865 aaKnown RBP18.28■□□□□ 0.52
SNX20-204ENST00000568993 WDR66Q8TBY9 1149 aa18.28■□□□□ 0.52
SNX20-204ENST00000568993 MTA3Q9BTC8 594 aa18.28■□□□□ 0.52
SNX20-204ENST00000568993 KRT23Q9C075 422 aa18.28■□□□□ 0.52
SNX20-204ENST00000568993 HPS5Q9UPZ3 1129 aa18.28■□□□□ 0.52
SNX20-204ENST00000568993 LRRC37AA6NMS7 1700 aa18.28■□□□□ 0.52
SNX20-204ENST00000568993 KLF18A0A0U1RQI7 1052 aa18.28■□□□□ 0.52
SNX20-204ENST00000568993 GOLGA6L3A6NEY3 463 aa18.28■□□□□ 0.52
SNX20-204ENST00000568993 B4E1Z4 1266 aa18.28■□□□□ 0.52
SNX20-204ENST00000568993 SH2B2O14492 632 aaPredicted RBP18.28■□□□□ 0.52
SNX20-204ENST00000568993 DHX16O60231 1041 aaKnown RBP18.28■□□□□ 0.52
SNX20-204ENST00000568993 ZNF804AQ7Z570 1209 aa18.28■□□□□ 0.52
SNX20-204ENST00000568993 NKX2-3Q8TAU0 364 aa18.28■□□□□ 0.52
SNX20-204ENST00000568993 PTPDC1A2A3K4 754 aa18.27■□□□□ 0.52
SNX20-204ENST00000568993 CTDSPL2Q05D32 466 aa18.27■□□□□ 0.52
SNX20-204ENST00000568993 MFSD6Q6ZSS7 791 aa18.27■□□□□ 0.52
SNX20-204ENST00000568993 IGDCC4Q8TDY8 1250 aa18.27■□□□□ 0.52
SNX20-204ENST00000568993 NCOA5Q9HCD5 579 aaKnown RBP18.27■□□□□ 0.52
SNX20-204ENST00000568993 RGS17Q9UGC6 210 aaPredicted RBP18.27■□□□□ 0.52
SNX20-204ENST00000568993 CNPY2Q9Y2B0 182 aa18.27■□□□□ 0.52
SNX20-204ENST00000568993 TACC3Q9Y6A5 838 aa18.27■□□□□ 0.52
SNX20-204ENST00000568993 LTBP1Q14766 1721 aa18.27■□□□□ 0.51
SNX20-204ENST00000568993 LIFRP42702 1097 aa18.27■□□□□ 0.51
SNX20-204ENST00000568993 CHAF1AQ13111 956 aaPredicted RBP18.27■□□□□ 0.51
SNX20-204ENST00000568993 CSPP1Q1MSJ5 1256 aa18.27■□□□□ 0.51
SNX20-204ENST00000568993 FOXD4L6Q3SYB3 417 aaPredicted RBP18.27■□□□□ 0.51
SNX20-204ENST00000568993 FOXD4L3Q6VB84 417 aaPredicted RBP18.27■□□□□ 0.51
SNX20-204ENST00000568993 SLC51AQ86UW1 340 aa18.27■□□□□ 0.51
SNX20-204ENST00000568993 SGMS1Q86VZ5 419 aa18.27■□□□□ 0.51
SNX20-204ENST00000568993 FAM184AQ8NB25 1140 aa18.27■□□□□ 0.51
SNX20-204ENST00000568993 RNF41Q9H4P4 317 aaPredicted RBP18.27■□□□□ 0.51
SNX20-204ENST00000568993 GGA1Q9UJY5 639 aa18.27■□□□□ 0.51
SNX20-204ENST00000568993 PRDX5P30044 214 aa18.26■□□□□ 0.51
SNX20-204ENST00000568993 CAVIN1Q6NZI2 390 aaKnown RBP18.26■□□□□ 0.51
SNX20-204ENST00000568993 DDX11Q96FC9 970 aa18.26■□□□□ 0.51
SNX20-204ENST00000568993 ZSWIM5Q9P217 1185 aa18.26■□□□□ 0.51
SNX20-204ENST00000568993 NSFL1CQ9UNZ2 370 aaKnown RBP18.26■□□□□ 0.51
SNX20-204ENST00000568993 NCLP19338 710 aaKnown RBP18.25■□□□□ 0.51
SNX20-204ENST00000568993 ZNF445P59923 1031 aa18.25■□□□□ 0.51
SNX20-204ENST00000568993 DYNLL1P63167 89 aaKnown RBP18.25■□□□□ 0.51
SNX20-204ENST00000568993 DNM1Q05193 864 aaKnown RBP18.25■□□□□ 0.51
SNX20-204ENST00000568993 PPARAQ07869 468 aa18.25■□□□□ 0.51
SNX20-204ENST00000568993 SP8Q8IXZ3 490 aa18.25■□□□□ 0.51
SNX20-204ENST00000568993 SDR42E1Q8WUS8 393 aa18.25■□□□□ 0.51
SNX20-204ENST00000568993 GDPD2Q9HCC8 539 aa18.25■□□□□ 0.51
SNX20-204ENST00000568993 NAP1L2Q9ULW6 460 aaPredicted RBP18.25■□□□□ 0.51
SNX20-204ENST00000568993 DUOX1Q9NRD9 1551 aa18.25■□□□□ 0.51
SNX20-204ENST00000568993 GOLGA8BA8MQT2 603 aa18.25■□□□□ 0.51
SNX20-204ENST00000568993 UFL1O94874 794 aa18.25■□□□□ 0.51
SNX20-204ENST00000568993 IL1R1P14778 569 aa18.25■□□□□ 0.51
SNX20-204ENST00000568993 RGS22Q8NE09 1264 aa18.25■□□□□ 0.51
SNX20-204ENST00000568993 ZSCAN16Q9H4T2 348 aaPredicted RBP18.25■□□□□ 0.51
SNX20-204ENST00000568993 SRGNP10124 158 aa18.24■□□□□ 0.51
SNX20-204ENST00000568993 LY9Q9HBG7 655 aa18.24■□□□□ 0.51
SNX20-204ENST00000568993 INCENPQ9NQS7 918 aa18.24■□□□□ 0.51
SNX20-204ENST00000568993 KDM4AO75164 1064 aa18.23■□□□□ 0.51
SNX20-204ENST00000568993 GADD45BO75293 160 aaPredicted RBP18.23■□□□□ 0.51
SNX20-204ENST00000568993 FGRP09769 529 aa18.23■□□□□ 0.51
SNX20-204ENST00000568993 PCP11498 1178 aaKnown RBP18.23■□□□□ 0.51
SNX20-204ENST00000568993 FDPSP14324 419 aaKnown RBP18.23■□□□□ 0.51
SNX20-204ENST00000568993 NPR1P16066 1061 aa18.23■□□□□ 0.51
SNX20-204ENST00000568993 ZSCAN23Q3MJ62 389 aa18.23■□□□□ 0.51
SNX20-204ENST00000568993 TBC1D16Q8TBP0 767 aa18.23■□□□□ 0.51
SNX20-204ENST00000568993 CD209Q9NNX6 404 aa18.23■□□□□ 0.51
SNX20-204ENST00000568993 H3BQV1 296 aa18.23■□□□□ 0.51
SNX20-204ENST00000568993 UBE2HP62256 183 aa18.23■□□□□ 0.51
SNX20-204ENST00000568993 KRT85P78386 507 aa18.23■□□□□ 0.51
SNX20-204ENST00000568993 RESTQ13127 1097 aa18.23■□□□□ 0.51
SNX20-204ENST00000568993 IFFO2Q5TF58 517 aa18.23■□□□□ 0.51
SNX20-204ENST00000568993 APOA5Q6Q788 366 aa18.23■□□□□ 0.51
SNX20-204ENST00000568993 FERMT3Q86UX7 667 aa18.23■□□□□ 0.51
SNX20-204ENST00000568993 CRNKL1Q9BZJ0 848 aaKnown RBP18.23■□□□□ 0.51
SNX20-204ENST00000568993 ATP8A2Q9NTI2 1148 aa18.23■□□□□ 0.51
SNX20-204ENST00000568993 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.23■□□□□ 0.51
SNX20-204ENST00000568993 ATP6V0A2Q9Y487 856 aa18.23■□□□□ 0.51
SNX20-204ENST00000568993 LDHBP07195 334 aaKnown RBP18.22■□□□□ 0.51
SNX20-204ENST00000568993 PDE6BP35913 854 aa18.22■□□□□ 0.51
SNX20-204ENST00000568993 TMEM67Q5HYA8 995 aa18.22■□□□□ 0.51
SNX20-204ENST00000568993 POTEAQ6S8J7 498 aa18.22■□□□□ 0.51
SNX20-204ENST00000568993 TMEM63CQ9P1W3 806 aa18.22■□□□□ 0.51
SNX20-204ENST00000568993 POLLQ9UGP5 575 aa18.22■□□□□ 0.51
SNX20-204ENST00000568993 PARP3Q9Y6F1 533 aa18.22■□□□□ 0.51
SNX20-204ENST00000568993 BAZ2AQ9UIF9 1905 aaKnown RBP18.22■□□□□ 0.51
SNX20-204ENST00000568993 ELP1O95163 1332 aa18.22■□□□□ 0.51
SNX20-204ENST00000568993 NID2Q14112 1375 aa18.22■□□□□ 0.51
SNX20-204ENST00000568993 PPEF1O14829 653 aaPredicted RBP18.22■□□□□ 0.51
SNX20-204ENST00000568993 MMP10P09238 476 aa18.22■□□□□ 0.51
SNX20-204ENST00000568993 MRE11P49959 708 aa18.22■□□□□ 0.51
SNX20-204ENST00000568993 GAS2L3Q86XJ1 694 aa18.22■□□□□ 0.51
SNX20-204ENST00000568993 DZIP1Q86YF9 867 aaKnown RBP18.22■□□□□ 0.51
SNX20-204ENST00000568993 IFIT3O14879 490 aaKnown RBP18.21■□□□□ 0.51
SNX20-204ENST00000568993 ALDH1B1P30837 517 aa18.21■□□□□ 0.51
SNX20-204ENST00000568993 GSTO1P78417 241 aa18.21■□□□□ 0.51
SNX20-204ENST00000568993 SBK1Q52WX2 424 aa18.21■□□□□ 0.51
SNX20-204ENST00000568993 CTR9Q6PD62 1173 aa18.21■□□□□ 0.51
SNX20-204ENST00000568993 TMTC2Q8N394 836 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms