RNA–Protein interactions for RNA: ENST00000567264.1

UBFD1-208, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBFD1, Length 642 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-208ENST00000567264 HIRAP54198 1017 aaPredicted RBP27.38■■□□□ 1.97
UBFD1-208ENST00000567264 ADGRA1Q86SQ6 560 aa27.38■■□□□ 1.97
UBFD1-208ENST00000567264 APPBP2Q92624 585 aa27.38■■□□□ 1.97
UBFD1-208ENST00000567264 MIGA1Q8NAN2 632 aa27.37■■□□□ 1.97
UBFD1-208ENST00000567264 AATFQ9NY61 560 aaKnown RBP eCLIP27.37■■□□□ 1.97
UBFD1-208ENST00000567264 CHGBP05060 677 aa27.36■■□□□ 1.97
UBFD1-208ENST00000567264 SLFNL1Q499Z3 407 aa27.36■■□□□ 1.97
UBFD1-208ENST00000567264 CERS3Q8IU89 383 aa27.36■■□□□ 1.97
UBFD1-208ENST00000567264 ZNF784Q8NCA9 323 aaPredicted RBP27.36■■□□□ 1.97
UBFD1-208ENST00000567264 TDRD3Q9H7E2 651 aaKnown RBP27.36■■□□□ 1.97
UBFD1-208ENST00000567264 DIAPH3Q9NSV4 1193 aa27.36■■□□□ 1.97
UBFD1-208ENST00000567264 TMOD2Q9NZR1 351 aa27.36■■□□□ 1.97
UBFD1-208ENST00000567264 CLEC11AQ9Y240 323 aa27.36■■□□□ 1.97
UBFD1-208ENST00000567264 MAGEB6P1A0A0J9YX57 407 aa27.35■■□□□ 1.97
UBFD1-208ENST00000567264 PLCG2P16885 1265 aa27.35■■□□□ 1.97
UBFD1-208ENST00000567264 PPP4CP60510 307 aa27.35■■□□□ 1.97
UBFD1-208ENST00000567264 USP40Q9NVE5 1235 aa27.35■■□□□ 1.97
UBFD1-208ENST00000567264 CLRN2A0PK11 232 aa27.34■■□□□ 1.97
UBFD1-208ENST00000567264 SPDYE2Q495Y8 402 aa27.34■■□□□ 1.97
UBFD1-208ENST00000567264 ZMYM1Q5SVZ6 1142 aa27.34■■□□□ 1.97
UBFD1-208ENST00000567264 CDC42EP5Q6NZY7 148 aa27.34■■□□□ 1.97
UBFD1-208ENST00000567264 ZC3H15Q8WU90 426 aaKnown RBP27.34■■□□□ 1.97
UBFD1-208ENST00000567264 DYNLL1P63167 89 aaKnown RBP27.33■■□□□ 1.97
UBFD1-208ENST00000567264 ANGEL2Q5VTE6 544 aaKnown RBP27.33■■□□□ 1.97
UBFD1-208ENST00000567264 AIDAQ96BJ3 306 aa27.33■■□□□ 1.97
UBFD1-208ENST00000567264 VEZTQ9HBM0 779 aa27.33■■□□□ 1.97
UBFD1-208ENST00000567264 GGA3Q9NZ52 723 aa27.33■■□□□ 1.97
UBFD1-208ENST00000567264 ZNF70Q9UC06 446 aaPredicted RBP27.33■■□□□ 1.97
UBFD1-208ENST00000567264 NMIQ13287 307 aaPredicted RBP27.32■■□□□ 1.96
UBFD1-208ENST00000567264 LDHDQ86WU2 507 aa27.32■■□□□ 1.96
UBFD1-208ENST00000567264 OSBP2Q969R2 916 aa27.32■■□□□ 1.96
UBFD1-208ENST00000567264 PUS7LQ9H0K6 701 aaKnown RBP27.32■■□□□ 1.96
UBFD1-208ENST00000567264 HELLSQ9NRZ9 838 aa27.32■■□□□ 1.96
UBFD1-208ENST00000567264 ASTN2O75129 1339 aaPredicted RBP27.32■■□□□ 1.96
UBFD1-208ENST00000567264 ECM29Q5VYK3 1845 aa27.32■■□□□ 1.96
UBFD1-208ENST00000567264 MBD4O95243 580 aa27.31■■□□□ 1.96
UBFD1-208ENST00000567264 RHBDL3P58872 404 aa27.31■■□□□ 1.96
UBFD1-208ENST00000567264 APOBEC3FQ8IUX4 373 aaKnown RBP27.31■■□□□ 1.96
UBFD1-208ENST00000567264 TEX11Q8IYF3 940 aa27.31■■□□□ 1.96
UBFD1-208ENST00000567264 SH3RF3Q8TEJ3 882 aaPredicted RBP27.31■■□□□ 1.96
UBFD1-208ENST00000567264 DCPSQ96C86 337 aaKnown RBP27.31■■□□□ 1.96
UBFD1-208ENST00000567264 RIOK1Q9BRS2 568 aaKnown RBP27.31■■□□□ 1.96
UBFD1-208ENST00000567264 KIF3CO14782 793 aa27.3■■□□□ 1.96
UBFD1-208ENST00000567264 POTEIP0CG38 1075 aa27.3■■□□□ 1.96
UBFD1-208ENST00000567264 POTEJP0CG39 1038 aa27.3■■□□□ 1.96
UBFD1-208ENST00000567264 FAM227BQ96M60 508 aa27.3■■□□□ 1.96
UBFD1-208ENST00000567264 ARMT1Q9H993 441 aa27.3■■□□□ 1.96
UBFD1-208ENST00000567264 PITPNM2Q9BZ72 1349 aa27.3■■□□□ 1.96
UBFD1-208ENST00000567264 M0R2C6 588 aa27.29■■□□□ 1.96
UBFD1-208ENST00000567264 CHMLP26374 656 aa27.29■■□□□ 1.96
UBFD1-208ENST00000567264 CWC27Q6UX04 472 aaKnown RBP27.29■■□□□ 1.96
UBFD1-208ENST00000567264 LCORLQ8N3X6 602 aa27.29■■□□□ 1.96
UBFD1-208ENST00000567264 SEC62Q99442 399 aaKnown RBP27.29■■□□□ 1.96
UBFD1-208ENST00000567264 CRNKL1Q9BZJ0 848 aaKnown RBP27.29■■□□□ 1.96
UBFD1-208ENST00000567264 PGAP2Q9UHJ9 254 aa27.29■■□□□ 1.96
UBFD1-208ENST00000567264 A0A0D9SFI3 127 aa27.28■■□□□ 1.96
UBFD1-208ENST00000567264 CDC45O75419 566 aa27.28■■□□□ 1.96
UBFD1-208ENST00000567264 CACNB3P54284 484 aa27.28■■□□□ 1.96
UBFD1-208ENST00000567264 TNFAIP1Q13829 316 aa27.28■■□□□ 1.96
UBFD1-208ENST00000567264 MCMDC2Q4G0Z9 681 aa27.28■■□□□ 1.96
UBFD1-208ENST00000567264 TCP10L2B9ZVM9 353 aa27.27■■□□□ 1.96
UBFD1-208ENST00000567264 GPAA1O43292 621 aa27.27■■□□□ 1.96
UBFD1-208ENST00000567264 TNNI2P48788 182 aa27.27■■□□□ 1.96
UBFD1-208ENST00000567264 FKBP1CQ5VVH2 108 aa27.27■■□□□ 1.96
UBFD1-208ENST00000567264 CASC1Q6TDU7 716 aa27.27■■□□□ 1.96
UBFD1-208ENST00000567264 SULF1Q8IWU6 871 aa27.27■■□□□ 1.96
UBFD1-208ENST00000567264 RUFY2Q8WXA3 655 aa27.27■■□□□ 1.96
UBFD1-208ENST00000567264 IDI2Q9BXS1 227 aa27.26■■□□□ 1.95
UBFD1-208ENST00000567264 WDHD1O75717 1129 aaPredicted RBP27.25■■□□□ 1.95
UBFD1-208ENST00000567264 USP5P45974 858 aa27.25■■□□□ 1.95
UBFD1-208ENST00000567264 NFIAQ12857 509 aa27.25■■□□□ 1.95
UBFD1-208ENST00000567264 PICALMQ13492 652 aa27.25■■□□□ 1.95
UBFD1-208ENST00000567264 CHADLQ6NUI6 762 aa27.25■■□□□ 1.95
UBFD1-208ENST00000567264 STRBPQ96SI9 672 aaKnown RBP27.25■■□□□ 1.95
UBFD1-208ENST00000567264 GNAT2P19087 354 aa27.24■■□□□ 1.95
UBFD1-208ENST00000567264 MFAP1P55081 439 aaKnown RBP27.24■■□□□ 1.95
UBFD1-208ENST00000567264 MAP1SQ66K74 1059 aaPredicted RBP27.24■■□□□ 1.95
UBFD1-208ENST00000567264 CCDC129Q6ZRS4 1044 aa27.24■■□□□ 1.95
UBFD1-208ENST00000567264 KRT26Q7Z3Y9 468 aa27.24■■□□□ 1.95
UBFD1-208ENST00000567264 TGFBRAP1Q8WUH2 860 aa27.24■■□□□ 1.95
UBFD1-208ENST00000567264 SLC4A4Q9Y6R1 1079 aa27.24■■□□□ 1.95
UBFD1-208ENST00000567264 RAD50Q92878 1312 aa27.23■■□□□ 1.95
UBFD1-208ENST00000567264 ENTPD3O75355 529 aa27.23■■□□□ 1.95
UBFD1-208ENST00000567264 CDC37L1Q7L3B6 337 aa27.23■■□□□ 1.95
UBFD1-208ENST00000567264 FAM83AQ86UY5 434 aa27.23■■□□□ 1.95
UBFD1-208ENST00000567264 SCAF8Q9UPN6 1271 aaKnown RBP27.23■■□□□ 1.95
UBFD1-208ENST00000567264 CCDC171Q6TFL3 1326 aa27.22■■□□□ 1.95
UBFD1-208ENST00000567264 NPM3O75607 178 aaKnown RBP27.22■■□□□ 1.95
UBFD1-208ENST00000567264 TOMM70O94826 608 aa27.22■■□□□ 1.95
UBFD1-208ENST00000567264 TCP10Q12799 353 aa27.22■■□□□ 1.95
UBFD1-208ENST00000567264 RASA3Q14644 834 aa27.22■■□□□ 1.95
UBFD1-208ENST00000567264 MAPKAPK5Q8IW41 473 aa27.22■■□□□ 1.95
UBFD1-208ENST00000567264 DEFB129Q9H1M3 183 aa27.22■■□□□ 1.95
UBFD1-208ENST00000567264 FAM198AQ9UFP1 575 aa27.22■■□□□ 1.95
UBFD1-208ENST00000567264 PPP2R3BQ9Y5P8 575 aa27.22■■□□□ 1.95
UBFD1-208ENST00000567264 FLT1P17948 1338 aa27.21■■□□□ 1.95
UBFD1-208ENST00000567264 ADM5C9JUS6 153 aa27.21■■□□□ 1.95
UBFD1-208ENST00000567264 PRKAB2O43741 272 aa27.21■■□□□ 1.95
UBFD1-208ENST00000567264 USP48Q86UV5 1035 aa27.21■■□□□ 1.95
UBFD1-208ENST00000567264 SDR42E1Q8WUS8 393 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms