RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 CCDC69A6NI79 296 aa10.23□□□□□ -0.77
LINC01541-201ENST00000566582 SH2B2O14492 632 aaPredicted RBP10.23□□□□□ -0.77
LINC01541-201ENST00000566582 OTUD7BQ6GQQ9 843 aa10.23□□□□□ -0.77
LINC01541-201ENST00000566582 FAM196AQ6ZSG2 479 aa10.23□□□□□ -0.77
LINC01541-201ENST00000566582 SEPT12Q8IYM1 358 aa10.23□□□□□ -0.77
LINC01541-201ENST00000566582 FAM84BQ96KN1 310 aaPredicted RBP10.23□□□□□ -0.77
LINC01541-201ENST00000566582 ZSWIM5Q9P217 1185 aa10.23□□□□□ -0.77
LINC01541-201ENST00000566582 ZMYM6O95789 1325 aa10.23□□□□□ -0.77
LINC01541-201ENST00000566582 PNPLA7Q6ZV29 1317 aa10.23□□□□□ -0.77
LINC01541-201ENST00000566582 ERICH2A1L162 156 aa10.23□□□□□ -0.77
LINC01541-201ENST00000566582 MINDY4BA8MYZ0 360 aa10.23□□□□□ -0.77
LINC01541-201ENST00000566582 ZBTB43O43298 467 aa10.23□□□□□ -0.77
LINC01541-201ENST00000566582 ADD1P35611 737 aaKnown RBP10.23□□□□□ -0.77
LINC01541-201ENST00000566582 SART3Q15020 963 aaKnown RBP10.23□□□□□ -0.77
LINC01541-201ENST00000566582 MAP3K11Q16584 847 aa10.23□□□□□ -0.77
LINC01541-201ENST00000566582 APOA5Q6Q788 366 aa10.23□□□□□ -0.77
LINC01541-201ENST00000566582 SYNE3Q6ZMZ3 975 aa10.23□□□□□ -0.77
LINC01541-201ENST00000566582 SDR42E1Q8WUS8 393 aa10.23□□□□□ -0.77
LINC01541-201ENST00000566582 FTOQ9C0B1 505 aaKnown RBP eCLIP10.23□□□□□ -0.77
LINC01541-201ENST00000566582 ANKRD2Q9GZV1 360 aa10.23□□□□□ -0.77
LINC01541-201ENST00000566582 DOCK2Q92608 1830 aa10.23□□□□□ -0.77
LINC01541-201ENST00000566582 NHSQ6T4R5 1651 aa10.23□□□□□ -0.77
LINC01541-201ENST00000566582 THSD7AQ9UPZ6 1657 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 CDKL5O76039 1030 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 POLR3DP05423 398 aaPredicted RBP10.22□□□□□ -0.77
LINC01541-201ENST00000566582 CCDC192P0DO97 292 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 HSPA1LP34931 641 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 ADGRA1Q86SQ6 560 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 NKX2-3Q8TAU0 364 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 PGBD1Q96JS3 809 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 ZKSCAN3Q9BRR0 538 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 MYL10Q9BUA6 226 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 TFCP2L1Q9NZI6 479 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 TRPC5Q9UL62 973 aaPredicted RBP10.22□□□□□ -0.77
LINC01541-201ENST00000566582 SLC12A7Q9Y666 1083 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 GOLGA8AA7E2F4 631 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 KLRK1P26718 216 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 HIBADHP31937 336 aaKnown RBP10.22□□□□□ -0.77
LINC01541-201ENST00000566582 ME1P48163 572 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 CHAF1AQ13111 956 aaPredicted RBP10.22□□□□□ -0.77
LINC01541-201ENST00000566582 GNL2Q13823 731 aaKnown RBP10.22□□□□□ -0.77
LINC01541-201ENST00000566582 ATL3Q6DD88 541 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 CKAP2LQ8IYA6 745 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 IGDCC4Q8TDY8 1250 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 USP28Q96RU2 1077 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 RNF41Q9H4P4 317 aaPredicted RBP10.22□□□□□ -0.77
LINC01541-201ENST00000566582 SENP2Q9HC62 589 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 DDX19AQ9NUU7 478 aaKnown RBP10.22□□□□□ -0.77
LINC01541-201ENST00000566582 ANKIB1Q9P2G1 1089 aa10.22□□□□□ -0.77
LINC01541-201ENST00000566582 NR1I2O75469 434 aa10.21□□□□□ -0.77
LINC01541-201ENST00000566582 PTMAP06454 111 aaKnown RBP10.21□□□□□ -0.77
LINC01541-201ENST00000566582 MSNP26038 577 aaKnown RBP10.21□□□□□ -0.77
LINC01541-201ENST00000566582 PPARAQ07869 468 aa10.21□□□□□ -0.77
LINC01541-201ENST00000566582 CNBD1Q8NA66 436 aa10.21□□□□□ -0.77
LINC01541-201ENST00000566582 FBXO18Q8NFZ0 1043 aa10.21□□□□□ -0.77
LINC01541-201ENST00000566582 CERKQ8TCT0 537 aa10.21□□□□□ -0.77
LINC01541-201ENST00000566582 LY9Q9HBG7 655 aa10.21□□□□□ -0.77
LINC01541-201ENST00000566582 SF3A1Q15459 793 aaKnown RBP10.21□□□□□ -0.78
LINC01541-201ENST00000566582 STAG1Q8WVM7 1258 aa10.21□□□□□ -0.78
LINC01541-201ENST00000566582 PHKBQ93100 1093 aa10.21□□□□□ -0.78
LINC01541-201ENST00000566582 PDLIM2Q96JY6 352 aa10.21□□□□□ -0.78
LINC01541-201ENST00000566582 ALG1Q9BT22 464 aa10.21□□□□□ -0.78
LINC01541-201ENST00000566582 GJB4Q9NTQ9 266 aa10.21□□□□□ -0.78
LINC01541-201ENST00000566582 SEMA3EO15041 775 aa10.2□□□□□ -0.78
LINC01541-201ENST00000566582 CDC27P30260 824 aa10.2□□□□□ -0.78
LINC01541-201ENST00000566582 IARSP41252 1262 aaKnown RBP10.2□□□□□ -0.78
LINC01541-201ENST00000566582 LIFRP42702 1097 aa10.2□□□□□ -0.78
LINC01541-201ENST00000566582 DYNLL1P63167 89 aaKnown RBP10.2□□□□□ -0.78
LINC01541-201ENST00000566582 TRIM29Q14134 588 aa10.2□□□□□ -0.78
LINC01541-201ENST00000566582 NFIXQ14938 502 aa10.2□□□□□ -0.78
LINC01541-201ENST00000566582 WTAPQ15007 396 aa10.2□□□□□ -0.78
LINC01541-201ENST00000566582 UVSSAQ2YD98 709 aa10.2□□□□□ -0.78
LINC01541-201ENST00000566582 FBXO33Q7Z6M2 555 aa10.2□□□□□ -0.78
LINC01541-201ENST00000566582 UBAC1Q9BSL1 405 aa10.2□□□□□ -0.78
LINC01541-201ENST00000566582 BCL11BQ9C0K0 894 aaPredicted RBP10.2□□□□□ -0.78
LINC01541-201ENST00000566582 USP25Q9UHP3 1055 aa10.2□□□□□ -0.78
LINC01541-201ENST00000566582 RCOR1Q9UKL0 485 aa10.2□□□□□ -0.78
LINC01541-201ENST00000566582 COL1A1P02452 1464 aaPredicted RBP10.2□□□□□ -0.78
LINC01541-201ENST00000566582 CASZ1Q86V15 1759 aa10.2□□□□□ -0.78
LINC01541-201ENST00000566582 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.19□□□□□ -0.78
LINC01541-201ENST00000566582 CCDC73Q6ZRK6 1079 aa10.19□□□□□ -0.78
LINC01541-201ENST00000566582 SGMS1Q86VZ5 419 aa10.19□□□□□ -0.78
LINC01541-201ENST00000566582 CCAR1Q8IX12 1150 aaKnown RBP10.19□□□□□ -0.78
LINC01541-201ENST00000566582 QTRT2Q9H974 415 aaKnown RBP10.19□□□□□ -0.78
LINC01541-201ENST00000566582 LRRC4BQ9NT99 713 aa10.19□□□□□ -0.78
LINC01541-201ENST00000566582 JAG2Q9Y219 1238 aa10.19□□□□□ -0.78
LINC01541-201ENST00000566582 STK38Q15208 465 aa10.19□□□□□ -0.78
LINC01541-201ENST00000566582 SASS6Q6UVJ0 657 aa10.19□□□□□ -0.78
LINC01541-201ENST00000566582 BRAPQ7Z569 592 aa10.19□□□□□ -0.78
LINC01541-201ENST00000566582 ILDR1Q86SU0 546 aaPredicted RBP10.19□□□□□ -0.78
LINC01541-201ENST00000566582 ZSCAN30Q86W11 494 aa10.19□□□□□ -0.78
LINC01541-201ENST00000566582 KLHL34Q8N239 644 aa10.19□□□□□ -0.78
LINC01541-201ENST00000566582 ESR2Q92731 530 aa10.19□□□□□ -0.78
LINC01541-201ENST00000566582 AIFM3Q96NN9 605 aa10.19□□□□□ -0.78
LINC01541-201ENST00000566582 FUCA2Q9BTY2 467 aa10.19□□□□□ -0.78
LINC01541-201ENST00000566582 CLSTN2Q9H4D0 955 aa10.19□□□□□ -0.78
LINC01541-201ENST00000566582 TACC3Q9Y6A5 838 aa10.19□□□□□ -0.78
LINC01541-201ENST00000566582 C4BP0C0L5 1744 aa10.19□□□□□ -0.78
LINC01541-201ENST00000566582 ONECUT3O60422 494 aaPredicted RBP10.18□□□□□ -0.78
LINC01541-201ENST00000566582 TM4SF1P30408 202 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms