RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 RFX7Q2KHR2 1363 aa15.24■□□□□ 0.03
SF3B3-206ENST00000565990 CHGBP05060 677 aa15.23■□□□□ 0.03
SF3B3-206ENST00000565990 KIF4BQ2VIQ3 1234 aa15.23■□□□□ 0.03
SF3B3-206ENST00000565990 NBPF9Q3BBW0 867 aa15.23■□□□□ 0.03
SF3B3-206ENST00000565990 TBC1D10BQ4KMP7 808 aaPredicted RBP15.23■□□□□ 0.03
SF3B3-206ENST00000565990 RBM5P52756 815 aaKnown RBP eCLIP15.22■□□□□ 0.03
SF3B3-206ENST00000565990 SLFNL1Q499Z3 407 aa15.22■□□□□ 0.03
SF3B3-206ENST00000565990 ZMYM1Q5SVZ6 1142 aa15.22■□□□□ 0.03
SF3B3-206ENST00000565990 RBM26Q5T8P6 1007 aaKnown RBP15.22■□□□□ 0.03
SF3B3-206ENST00000565990 TRPM4Q8TD43 1214 aa15.22■□□□□ 0.03
SF3B3-206ENST00000565990 GPBP1L1Q9HC44 474 aaPredicted RBP15.22■□□□□ 0.03
SF3B3-206ENST00000565990 CDK5RAP2Q96SN8 1893 aa15.22■□□□□ 0.03
SF3B3-206ENST00000565990 BAG3O95817 575 aa15.21■□□□□ 0.03
SF3B3-206ENST00000565990 RHBDL3P58872 404 aa15.21■□□□□ 0.03
SF3B3-206ENST00000565990 CDC42EP5Q6NZY7 148 aa15.21■□□□□ 0.03
SF3B3-206ENST00000565990 CERS3Q8IU89 383 aa15.21■□□□□ 0.03
SF3B3-206ENST00000565990 ZNF784Q8NCA9 323 aaPredicted RBP15.21■□□□□ 0.03
SF3B3-206ENST00000565990 ZNF526Q8TF50 670 aaPredicted RBP15.21■□□□□ 0.03
SF3B3-206ENST00000565990 APPBP2Q92624 585 aa15.21■□□□□ 0.03
SF3B3-206ENST00000565990 OSBP2Q969R2 916 aa15.21■□□□□ 0.03
SF3B3-206ENST00000565990 RIOK1Q9BRS2 568 aaKnown RBP15.21■□□□□ 0.03
SF3B3-206ENST00000565990 PUS7LQ9H0K6 701 aaKnown RBP15.21■□□□□ 0.03
SF3B3-206ENST00000565990 USP40Q9NVE5 1235 aa15.21■□□□□ 0.03
SF3B3-206ENST00000565990 FOCADQ5VW36 1801 aa15.2■□□□□ 0.02
SF3B3-206ENST00000565990 HIP1O00291 1037 aa15.2■□□□□ 0.02
SF3B3-206ENST00000565990 KIF3CO14782 793 aa15.2■□□□□ 0.02
SF3B3-206ENST00000565990 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
SF3B3-206ENST00000565990 BTDP43251 543 aa15.2■□□□□ 0.02
SF3B3-206ENST00000565990 SPDYE2Q495Y8 402 aa15.2■□□□□ 0.02
SF3B3-206ENST00000565990 FKBP1CQ5VVH2 108 aa15.2■□□□□ 0.02
SF3B3-206ENST00000565990 TDRD3Q9H7E2 651 aaKnown RBP15.2■□□□□ 0.02
SF3B3-206ENST00000565990 HELLSQ9NRZ9 838 aa15.2■□□□□ 0.02
SF3B3-206ENST00000565990 ZNF70Q9UC06 446 aaPredicted RBP15.2■□□□□ 0.02
SF3B3-206ENST00000565990 PITPNM2Q9BZ72 1349 aa15.19■□□□□ 0.02
SF3B3-206ENST00000565990 MAGEB6P1A0A0J9YX57 407 aa15.19■□□□□ 0.02
SF3B3-206ENST00000565990 MYO1BO43795 1136 aa15.19■□□□□ 0.02
SF3B3-206ENST00000565990 PLCG2P16885 1265 aa15.19■□□□□ 0.02
SF3B3-206ENST00000565990 CHMLP26374 656 aa15.19■□□□□ 0.02
SF3B3-206ENST00000565990 MCMDC2Q4G0Z9 681 aa15.19■□□□□ 0.02
SF3B3-206ENST00000565990 STRBPQ96SI9 672 aaKnown RBP15.19■□□□□ 0.02
SF3B3-206ENST00000565990 IDI2Q9BXS1 227 aa15.19■□□□□ 0.02
SF3B3-206ENST00000565990 AATFQ9NY61 560 aaKnown RBP eCLIP15.19■□□□□ 0.02
SF3B3-206ENST00000565990 WDHD1O75717 1129 aaPredicted RBP15.18■□□□□ 0.02
SF3B3-206ENST00000565990 SH3RF3Q8TEJ3 882 aaPredicted RBP15.18■□□□□ 0.02
SF3B3-206ENST00000565990 FAM227BQ96M60 508 aa15.18■□□□□ 0.02
SF3B3-206ENST00000565990 SEC62Q99442 399 aaKnown RBP15.18■□□□□ 0.02
SF3B3-206ENST00000565990 ASTN2O75129 1339 aaPredicted RBP15.17■□□□□ 0.02
SF3B3-206ENST00000565990 DYNLL1P63167 89 aaKnown RBP15.17■□□□□ 0.02
SF3B3-206ENST00000565990 NMIQ13287 307 aaPredicted RBP15.17■□□□□ 0.02
SF3B3-206ENST00000565990 ANGEL2Q5VTE6 544 aaKnown RBP15.17■□□□□ 0.02
SF3B3-206ENST00000565990 LDHDQ86WU2 507 aa15.17■□□□□ 0.02
SF3B3-206ENST00000565990 MIGA1Q8NAN2 632 aa15.17■□□□□ 0.02
SF3B3-206ENST00000565990 NOL10Q9BSC4 688 aaKnown RBP15.17■□□□□ 0.02
SF3B3-206ENST00000565990 MKRN1Q9UHC7 482 aaKnown RBP15.17■□□□□ 0.02
SF3B3-206ENST00000565990 M0R2C6 588 aa15.16■□□□□ 0.02
SF3B3-206ENST00000565990 POTEIP0CG38 1075 aa15.16■□□□□ 0.02
SF3B3-206ENST00000565990 POTEJP0CG39 1038 aa15.16■□□□□ 0.02
SF3B3-206ENST00000565990 FAM83AQ86UY5 434 aa15.16■□□□□ 0.02
SF3B3-206ENST00000565990 LCORLQ8N3X6 602 aa15.16■□□□□ 0.02
SF3B3-206ENST00000565990 FAM198AQ9UFP1 575 aa15.16■□□□□ 0.02
SF3B3-206ENST00000565990 A0A0D9SFI3 127 aa15.15■□□□□ 0.02
SF3B3-206ENST00000565990 CLRN2A0PK11 232 aa15.15■□□□□ 0.02
SF3B3-206ENST00000565990 PATL2C9JE40 543 aaKnown RBP15.15■□□□□ 0.02
SF3B3-206ENST00000565990 ENTPD3O75355 529 aa15.15■□□□□ 0.02
SF3B3-206ENST00000565990 MBD4O95243 580 aa15.15■□□□□ 0.02
SF3B3-206ENST00000565990 NFIAQ12857 509 aa15.15■□□□□ 0.02
SF3B3-206ENST00000565990 EAPPQ56P03 285 aaPredicted RBP15.15■□□□□ 0.02
SF3B3-206ENST00000565990 CWC27Q6UX04 472 aaKnown RBP15.15■□□□□ 0.02
SF3B3-206ENST00000565990 CDC37L1Q7L3B6 337 aa15.15■□□□□ 0.02
SF3B3-206ENST00000565990 FAM151AQ8WW52 585 aa15.15■□□□□ 0.02
SF3B3-206ENST00000565990 AIDAQ96BJ3 306 aa15.15■□□□□ 0.02
SF3B3-206ENST00000565990 DCPSQ96C86 337 aaKnown RBP15.15■□□□□ 0.02
SF3B3-206ENST00000565990 ARMT1Q9H993 441 aa15.15■□□□□ 0.02
SF3B3-206ENST00000565990 DIAPH3Q9NSV4 1193 aa15.15■□□□□ 0.02
SF3B3-206ENST00000565990 CNTNAP1P78357 1384 aa15.14■□□□□ 0.01
SF3B3-206ENST00000565990 RPAP1Q9BWH6 1393 aaPredicted RBP15.14■□□□□ 0.01
SF3B3-206ENST00000565990 MYH1P12882 1939 aa15.14■□□□□ 0.01
SF3B3-206ENST00000565990 GPAA1O43292 621 aa15.14■□□□□ 0.01
SF3B3-206ENST00000565990 TOMM70O94826 608 aa15.14■□□□□ 0.01
SF3B3-206ENST00000565990 ITGBL1O95965 494 aaPredicted RBP15.14■□□□□ 0.01
SF3B3-206ENST00000565990 GNAT2P19087 354 aa15.14■□□□□ 0.01
SF3B3-206ENST00000565990 CHADLQ6NUI6 762 aa15.14■□□□□ 0.01
SF3B3-206ENST00000565990 GIMAP6Q6P9H5 292 aa15.14■□□□□ 0.01
SF3B3-206ENST00000565990 APOBEC3FQ8IUX4 373 aaKnown RBP15.14■□□□□ 0.01
SF3B3-206ENST00000565990 TEX11Q8IYF3 940 aa15.14■□□□□ 0.01
SF3B3-206ENST00000565990 TGFBRAP1Q8WUH2 860 aa15.14■□□□□ 0.01
SF3B3-206ENST00000565990 RUFY2Q8WXA3 655 aa15.14■□□□□ 0.01
SF3B3-206ENST00000565990 TEPSINQ96N21 525 aa15.14■□□□□ 0.01
SF3B3-206ENST00000565990 DEFB129Q9H1M3 183 aa15.14■□□□□ 0.01
SF3B3-206ENST00000565990 IL25Q9H293 177 aa15.14■□□□□ 0.01
SF3B3-206ENST00000565990 DDX4Q9NQI0 724 aaKnown RBP15.14■□□□□ 0.01
SF3B3-206ENST00000565990 ATP8A2Q9NTI2 1148 aa15.14■□□□□ 0.01
SF3B3-206ENST00000565990 GGA3Q9NZ52 723 aa15.14■□□□□ 0.01
SF3B3-206ENST00000565990 GSG1L2A8MUP6 293 aa15.13■□□□□ 0.01
SF3B3-206ENST00000565990 PRKAB2O43741 272 aa15.13■□□□□ 0.01
SF3B3-206ENST00000565990 CDC45O75419 566 aa15.13■□□□□ 0.01
SF3B3-206ENST00000565990 CACNB3P54284 484 aa15.13■□□□□ 0.01
SF3B3-206ENST00000565990 TNFAIP1Q13829 316 aa15.13■□□□□ 0.01
SF3B3-206ENST00000565990 RASA3Q14644 834 aa15.13■□□□□ 0.01
SF3B3-206ENST00000565990 MAP1SQ66K74 1059 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms