RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 BPIFA3Q9BQP9 254 aa17.73■□□□□ 0.43
HERC2-207ENST00000564734 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.72■□□□□ 0.43
HERC2-207ENST00000564734 RBM6P78332 1123 aaKnown RBP17.72■□□□□ 0.43
HERC2-207ENST00000564734 SF3A1Q15459 793 aaKnown RBP17.72■□□□□ 0.43
HERC2-207ENST00000564734 APOA5Q6Q788 366 aa17.72■□□□□ 0.43
HERC2-207ENST00000564734 AK7Q96M32 723 aa17.72■□□□□ 0.43
HERC2-207ENST00000564734 BECN2A8MW95 431 aa17.72■□□□□ 0.43
HERC2-207ENST00000564734 CMA1P23946 247 aa17.72■□□□□ 0.43
HERC2-207ENST00000564734 METAP2P50579 478 aaKnown RBP eCLIP17.72■□□□□ 0.43
HERC2-207ENST00000564734 AOPEPQ8N6M6 819 aa17.72■□□□□ 0.43
HERC2-207ENST00000564734 TMEM87BQ96K49 555 aa17.72■□□□□ 0.43
HERC2-207ENST00000564734 AIFM3Q96NN9 605 aa17.72■□□□□ 0.43
HERC2-207ENST00000564734 SDF4Q9BRK5 362 aa17.72■□□□□ 0.43
HERC2-207ENST00000564734 TBC1D2BQ9UPU7 963 aa17.72■□□□□ 0.43
HERC2-207ENST00000564734 SLC39A14Q15043 492 aa17.72■□□□□ 0.43
HERC2-207ENST00000564734 NTRK3Q16288 839 aa17.72■□□□□ 0.43
HERC2-207ENST00000564734 SYTL4Q96C24 671 aaPredicted RBP17.72■□□□□ 0.43
HERC2-207ENST00000564734 FAM217BQ9NTX9 383 aaPredicted RBP17.72■□□□□ 0.43
HERC2-207ENST00000564734 TACC3Q9Y6A5 838 aa17.72■□□□□ 0.43
HERC2-207ENST00000564734 PLCH1Q4KWH8 1693 aa17.71■□□□□ 0.43
HERC2-207ENST00000564734 B4E1Z4 1266 aa17.71■□□□□ 0.43
HERC2-207ENST00000564734 CTIFO43310 598 aaKnown RBP17.71■□□□□ 0.43
HERC2-207ENST00000564734 WDHD1O75717 1129 aaPredicted RBP17.71■□□□□ 0.43
HERC2-207ENST00000564734 SYNE3Q6ZMZ3 975 aa17.71■□□□□ 0.43
HERC2-207ENST00000564734 SGMS1Q86VZ5 419 aa17.71■□□□□ 0.43
HERC2-207ENST00000564734 ALG1Q9BT22 464 aa17.71■□□□□ 0.43
HERC2-207ENST00000564734 NAT10Q9H0A0 1025 aaKnown RBP17.71■□□□□ 0.43
HERC2-207ENST00000564734 LY9Q9HBG7 655 aa17.71■□□□□ 0.43
HERC2-207ENST00000564734 EPB41L4AQ9HCS5 686 aaPredicted RBP17.71■□□□□ 0.43
HERC2-207ENST00000564734 NEMFO60524 1076 aa17.71■□□□□ 0.43
HERC2-207ENST00000564734 ZNF202O95125 648 aa17.71■□□□□ 0.43
HERC2-207ENST00000564734 ARID5BQ14865 1188 aa17.71■□□□□ 0.43
HERC2-207ENST00000564734 FAM182BQ5T319 152 aa17.71■□□□□ 0.43
HERC2-207ENST00000564734 PATL2C9JE40 543 aaKnown RBP17.7■□□□□ 0.42
HERC2-207ENST00000564734 APPP05067 770 aa17.7■□□□□ 0.42
HERC2-207ENST00000564734 CHAF1AQ13111 956 aaPredicted RBP17.7■□□□□ 0.42
HERC2-207ENST00000564734 SPATA5Q8NB90 893 aa17.7■□□□□ 0.42
HERC2-207ENST00000564734 HELBQ8NG08 1087 aaPredicted RBP17.7■□□□□ 0.42
HERC2-207ENST00000564734 BCL2L12Q9HB09 334 aa17.7■□□□□ 0.42
HERC2-207ENST00000564734 COL14A1Q05707 1796 aaKnown RBP17.7■□□□□ 0.42
HERC2-207ENST00000564734 CDKL5O76039 1030 aa17.7■□□□□ 0.42
HERC2-207ENST00000564734 DPCR1Q3MIW9 517 aa17.7■□□□□ 0.42
HERC2-207ENST00000564734 KRT40Q6A162 431 aa17.7■□□□□ 0.42
HERC2-207ENST00000564734 DOCK2Q92608 1830 aa17.7■□□□□ 0.42
HERC2-207ENST00000564734 PFKFB1P16118 471 aa17.7■□□□□ 0.42
HERC2-207ENST00000564734 PTPAQ15257 358 aa17.7■□□□□ 0.42
HERC2-207ENST00000564734 RANBP6O60518 1105 aaKnown RBP17.69■□□□□ 0.42
HERC2-207ENST00000564734 SUSD4Q5VX71 490 aa17.69■□□□□ 0.42
HERC2-207ENST00000564734 NBPF11Q86T75 865 aa17.69■□□□□ 0.42
HERC2-207ENST00000564734 IFNL3Q8IZI9 196 aa17.69■□□□□ 0.42
HERC2-207ENST00000564734 AIDAQ96BJ3 306 aa17.69■□□□□ 0.42
HERC2-207ENST00000564734 MAP3K14Q99558 947 aa17.69■□□□□ 0.42
HERC2-207ENST00000564734 QTRT2Q9H974 415 aaKnown RBP17.69■□□□□ 0.42
HERC2-207ENST00000564734 INCENPQ9NQS7 918 aa17.69■□□□□ 0.42
HERC2-207ENST00000564734 HPSEQ9Y251 543 aa17.69■□□□□ 0.42
HERC2-207ENST00000564734 MROH7-TTC4A0A0A0MT08 1334 aa17.69■□□□□ 0.42
HERC2-207ENST00000564734 FAM237AA0A1B0GTK4 181 aa17.69■□□□□ 0.42
HERC2-207ENST00000564734 RXRAP19793 462 aa17.69■□□□□ 0.42
HERC2-207ENST00000564734 EIF5P55010 431 aaKnown RBP17.69■□□□□ 0.42
HERC2-207ENST00000564734 RASGRF1Q13972 1273 aa17.69■□□□□ 0.42
HERC2-207ENST00000564734 VPS37DQ86XT2 251 aa17.69■□□□□ 0.42
HERC2-207ENST00000564734 TIGD1Q96MW7 591 aa17.69■□□□□ 0.42
HERC2-207ENST00000564734 TIAM2Q8IVF5 1701 aa17.68■□□□□ 0.42
HERC2-207ENST00000564734 PPP6R2O75170 966 aa17.68■□□□□ 0.42
HERC2-207ENST00000564734 U2AF2P26368 475 aaKnown RBP eCLIP17.68■□□□□ 0.42
HERC2-207ENST00000564734 LIFRP42702 1097 aa17.68■□□□□ 0.42
HERC2-207ENST00000564734 NLRP12P59046 1061 aa17.68■□□□□ 0.42
HERC2-207ENST00000564734 NID2Q14112 1375 aa17.68■□□□□ 0.42
HERC2-207ENST00000564734 FAM177BA6PVY3 158 aa17.68■□□□□ 0.42
HERC2-207ENST00000564734 EXOC5O00471 708 aa17.68■□□□□ 0.42
HERC2-207ENST00000564734 SLC3A2P08195 630 aaKnown RBP17.68■□□□□ 0.42
HERC2-207ENST00000564734 SLC5A1P13866 664 aa17.68■□□□□ 0.42
HERC2-207ENST00000564734 CCZ1BP86790 482 aa17.68■□□□□ 0.42
HERC2-207ENST00000564734 CCZ1P86791 482 aaPredicted RBP17.68■□□□□ 0.42
HERC2-207ENST00000564734 INTS5Q6P9B9 1019 aaKnown RBP17.68■□□□□ 0.42
HERC2-207ENST00000564734 PHKBQ93100 1093 aa17.68■□□□□ 0.42
HERC2-207ENST00000564734 ECM29Q5VYK3 1845 aa17.68■□□□□ 0.42
HERC2-207ENST00000564734 ZBTB43O43298 467 aa17.67■□□□□ 0.42
HERC2-207ENST00000564734 ZSWIM5Q9P217 1185 aa17.67■□□□□ 0.42
HERC2-207ENST00000564734 COL22A1Q8NFW1 1626 aaPredicted RBP17.67■□□□□ 0.42
HERC2-207ENST00000564734 NCAPHQ15003 741 aa17.67■□□□□ 0.42
HERC2-207ENST00000564734 MAGEB6Q8N7X4 407 aa17.67■□□□□ 0.42
HERC2-207ENST00000564734 C16orf45Q96MC5 204 aaPredicted RBP17.67■□□□□ 0.42
HERC2-207ENST00000564734 KCND1Q9NSA2 647 aa17.67■□□□□ 0.42
HERC2-207ENST00000564734 STK36Q9NRP7 1315 aa17.67■□□□□ 0.42
HERC2-207ENST00000564734 GSG1L2A8MUP6 293 aa17.67■□□□□ 0.42
HERC2-207ENST00000564734 MBD4O95243 580 aa17.67■□□□□ 0.42
HERC2-207ENST00000564734 TNNT1P13805 278 aa17.67■□□□□ 0.42
HERC2-207ENST00000564734 ANKRD7Q92527 254 aa17.67■□□□□ 0.42
HERC2-207ENST00000564734 OSBPL5Q9H0X9 879 aaPredicted RBP17.67■□□□□ 0.42
HERC2-207ENST00000564734 SNAP23O00161 211 aa17.66■□□□□ 0.42
HERC2-207ENST00000564734 CTDSPL2Q05D32 466 aa17.66■□□□□ 0.42
HERC2-207ENST00000564734 DDB1Q16531 1140 aa17.66■□□□□ 0.42
HERC2-207ENST00000564734 TMEM67Q5HYA8 995 aa17.66■□□□□ 0.42
HERC2-207ENST00000564734 SHC4Q6S5L8 630 aa17.66■□□□□ 0.42
HERC2-207ENST00000564734 MICU3Q86XE3 530 aa17.66■□□□□ 0.42
HERC2-207ENST00000564734 FBXW7Q969H0 707 aa17.66■□□□□ 0.42
HERC2-207ENST00000564734 CCDC69A6NI79 296 aa17.66■□□□□ 0.42
HERC2-207ENST00000564734 SMTNL1A8MU46 457 aa17.66■□□□□ 0.42
HERC2-207ENST00000564734 MARCKSP29966 332 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms