RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 ZNF804BA4D1E1 1349 aa11.61□□□□□ -0.55
UBFD1-202ENST00000563366 XDHP47989 1333 aa11.61□□□□□ -0.55
UBFD1-202ENST00000563366 PDS5AQ29RF7 1337 aaKnown RBP11.61□□□□□ -0.55
UBFD1-202ENST00000563366 KIAA1551Q9HCM1 1747 aa11.61□□□□□ -0.55
UBFD1-202ENST00000563366 C3orf80F5H4A9 247 aa11.61□□□□□ -0.55
UBFD1-202ENST00000563366 K7ELQ4 463 aaPredicted RBP11.61□□□□□ -0.55
UBFD1-202ENST00000563366 TAF5LO75529 589 aa11.61□□□□□ -0.55
UBFD1-202ENST00000563366 BBOX1O75936 387 aa11.61□□□□□ -0.55
UBFD1-202ENST00000563366 PBX2P40425 430 aa11.61□□□□□ -0.55
UBFD1-202ENST00000563366 ZAP70P43403 619 aa11.61□□□□□ -0.55
UBFD1-202ENST00000563366 PHKA1P46020 1223 aa11.61□□□□□ -0.55
UBFD1-202ENST00000563366 DDR1Q08345 913 aa11.61□□□□□ -0.55
UBFD1-202ENST00000563366 EZH2Q15910 746 aaKnown RBP11.61□□□□□ -0.55
UBFD1-202ENST00000563366 ZMYM1Q5SVZ6 1142 aa11.61□□□□□ -0.55
UBFD1-202ENST00000563366 VPS37DQ86XT2 251 aa11.61□□□□□ -0.55
UBFD1-202ENST00000563366 SPATA5Q8NB90 893 aa11.61□□□□□ -0.55
UBFD1-202ENST00000563366 MAP4K1Q92918 833 aa11.61□□□□□ -0.55
UBFD1-202ENST00000563366 EDC3Q96F86 508 aaKnown RBP11.61□□□□□ -0.55
UBFD1-202ENST00000563366 CRAMP1Q96RY5 1269 aa11.61□□□□□ -0.55
UBFD1-202ENST00000563366 BEGAINQ9BUH8 593 aa11.61□□□□□ -0.55
UBFD1-202ENST00000563366 LEMD3Q9Y2U8 911 aa11.61□□□□□ -0.55
UBFD1-202ENST00000563366 MYO5AQ9Y4I1 1855 aaKnown RBP11.61□□□□□ -0.55
UBFD1-202ENST00000563366 MAP3K12Q12852 859 aa11.6□□□□□ -0.55
UBFD1-202ENST00000563366 KRT32Q14532 448 aa11.6□□□□□ -0.55
UBFD1-202ENST00000563366 APPBP2Q92624 585 aa11.6□□□□□ -0.55
UBFD1-202ENST00000563366 DSCC1Q9BVC3 393 aa11.6□□□□□ -0.55
UBFD1-202ENST00000563366 IL25Q9H293 177 aa11.6□□□□□ -0.55
UBFD1-202ENST00000563366 KIAA1468Q9P260 1216 aa11.6□□□□□ -0.55
UBFD1-202ENST00000563366 DENND2AQ9ULE3 1009 aa11.6□□□□□ -0.55
UBFD1-202ENST00000563366 COL11A2P13942 1736 aaPredicted RBP11.6□□□□□ -0.55
UBFD1-202ENST00000563366 LAMA4Q16363 1823 aa11.59□□□□□ -0.55
UBFD1-202ENST00000563366 SMAPO00193 183 aa11.59□□□□□ -0.55
UBFD1-202ENST00000563366 HSP90AA1P07900 732 aaKnown RBP11.59□□□□□ -0.55
UBFD1-202ENST00000563366 MMP10P09238 476 aa11.59□□□□□ -0.55
UBFD1-202ENST00000563366 NPR1P16066 1061 aa11.59□□□□□ -0.55
UBFD1-202ENST00000563366 PSMA5P28066 241 aa11.59□□□□□ -0.55
UBFD1-202ENST00000563366 ALDH1B1P30837 517 aa11.59□□□□□ -0.55
UBFD1-202ENST00000563366 RASGRF1Q13972 1273 aa11.59□□□□□ -0.55
UBFD1-202ENST00000563366 SCARF1Q14162 830 aa11.59□□□□□ -0.55
UBFD1-202ENST00000563366 UBE3CQ15386 1083 aa11.59□□□□□ -0.55
UBFD1-202ENST00000563366 WASHC4Q2M389 1173 aa11.59□□□□□ -0.55
UBFD1-202ENST00000563366 TM6SF1Q9BZW5 370 aa11.59□□□□□ -0.55
UBFD1-202ENST00000563366 TMX4Q9H1E5 349 aaPredicted RBP11.59□□□□□ -0.55
UBFD1-202ENST00000563366 GOPCQ9HD26 462 aa11.59□□□□□ -0.55
UBFD1-202ENST00000563366 ANKIB1Q9P2G1 1089 aa11.59□□□□□ -0.55
UBFD1-202ENST00000563366 RBM8AQ9Y5S9 174 aaKnown RBP11.59□□□□□ -0.55
UBFD1-202ENST00000563366 NDUFB9Q9Y6M9 179 aa11.59□□□□□ -0.55
UBFD1-202ENST00000563366 LTBP1Q14766 1721 aa11.59□□□□□ -0.55
UBFD1-202ENST00000563366 CACNA1SQ13698 1873 aa11.59□□□□□ -0.55
UBFD1-202ENST00000563366 DLEC1Q9Y238 1755 aa11.59□□□□□ -0.55
UBFD1-202ENST00000563366 CYP2E1P05181 493 aaPredicted RBP11.58□□□□□ -0.56
UBFD1-202ENST00000563366 ADD2P35612 726 aa11.58□□□□□ -0.56
UBFD1-202ENST00000563366 NECTIN1Q15223 517 aa11.58□□□□□ -0.56
UBFD1-202ENST00000563366 POTEEQ6S8J3 1075 aa11.58□□□□□ -0.56
UBFD1-202ENST00000563366 C15orf52Q6ZUT6 534 aaKnown RBP11.58□□□□□ -0.56
UBFD1-202ENST00000563366 ZNF687Q8N1G0 1237 aa11.58□□□□□ -0.56
UBFD1-202ENST00000563366 CCDC24Q8N4L8 307 aa11.58□□□□□ -0.56
UBFD1-202ENST00000563366 SLC16A10Q8TF71 515 aa11.58□□□□□ -0.56
UBFD1-202ENST00000563366 KCNB2Q92953 911 aa11.58□□□□□ -0.56
UBFD1-202ENST00000563366 ANTXR1Q9H6X2 564 aa11.58□□□□□ -0.56
UBFD1-202ENST00000563366 CTNNA3Q9UI47 895 aa11.58□□□□□ -0.56
UBFD1-202ENST00000563366 MAST3O60307 1309 aa11.58□□□□□ -0.56
UBFD1-202ENST00000563366 IDH1O75874 414 aaKnown RBP11.57□□□□□ -0.56
UBFD1-202ENST00000563366 ATP2B4P23634 1241 aa11.57□□□□□ -0.56
UBFD1-202ENST00000563366 BCAMP50895 628 aa11.57□□□□□ -0.56
UBFD1-202ENST00000563366 NEK4P51957 841 aa11.57□□□□□ -0.56
UBFD1-202ENST00000563366 TSGA10IPQ3SY00 556 aa11.57□□□□□ -0.56
UBFD1-202ENST00000563366 SLC9C2Q5TAH2 1124 aa11.57□□□□□ -0.56
UBFD1-202ENST00000563366 DMRTA1Q5VZB9 504 aa11.57□□□□□ -0.56
UBFD1-202ENST00000563366 ZNF804AQ7Z570 1209 aa11.57□□□□□ -0.56
UBFD1-202ENST00000563366 ZNF589Q86UQ0 364 aaPredicted RBP11.57□□□□□ -0.56
UBFD1-202ENST00000563366 SULF1Q8IWU6 871 aa11.57□□□□□ -0.56
UBFD1-202ENST00000563366 ZGPATQ8N5A5 531 aaKnown RBP11.57□□□□□ -0.56
UBFD1-202ENST00000563366 SLC4A5Q9BY07 1137 aa11.57□□□□□ -0.56
UBFD1-202ENST00000563366 PODXL2Q9NZ53 605 aa11.57□□□□□ -0.56
UBFD1-202ENST00000563366 SNX14Q9Y5W7 946 aa11.57□□□□□ -0.56
UBFD1-202ENST00000563366 PPEF1O14829 653 aaPredicted RBP11.56□□□□□ -0.56
UBFD1-202ENST00000563366 FRAT2O75474 233 aaPredicted RBP11.56□□□□□ -0.56
UBFD1-202ENST00000563366 HIBADHP31937 336 aaKnown RBP11.56□□□□□ -0.56
UBFD1-202ENST00000563366 PTH1RQ03431 593 aa11.56□□□□□ -0.56
UBFD1-202ENST00000563366 SH3D19Q5HYK7 790 aa11.56□□□□□ -0.56
UBFD1-202ENST00000563366 CREB3L3Q68CJ9 461 aa11.56□□□□□ -0.56
UBFD1-202ENST00000563366 PRPF40BQ6NWY9 871 aaKnown RBP11.56□□□□□ -0.56
UBFD1-202ENST00000563366 PI16Q6UXB8 463 aa11.56□□□□□ -0.56
UBFD1-202ENST00000563366 FBXO33Q7Z6M2 555 aa11.56□□□□□ -0.56
UBFD1-202ENST00000563366 MASTLQ96GX5 879 aa11.56□□□□□ -0.56
UBFD1-202ENST00000563366 FAM84BQ96KN1 310 aaPredicted RBP11.56□□□□□ -0.56
UBFD1-202ENST00000563366 PCMTD1Q96MG8 357 aaPredicted RBP11.56□□□□□ -0.56
UBFD1-202ENST00000563366 TMEM134Q9H6X4 195 aa11.56□□□□□ -0.56
UBFD1-202ENST00000563366 LRP2BPQ9P2M1 347 aa11.56□□□□□ -0.56
UBFD1-202ENST00000563366 RABGEF1Q9UJ41 708 aa11.56□□□□□ -0.56
UBFD1-202ENST00000563366 PALD1Q9ULE6 856 aa11.56□□□□□ -0.56
UBFD1-202ENST00000563366 CYP46A1Q9Y6A2 500 aa11.56□□□□□ -0.56
UBFD1-202ENST00000563366 CHD4Q14839 1912 aa11.56□□□□□ -0.56
UBFD1-202ENST00000563366 RPAP1Q9BWH6 1393 aaPredicted RBP11.55□□□□□ -0.56
UBFD1-202ENST00000563366 SLC27A2O14975 620 aa11.55□□□□□ -0.56
UBFD1-202ENST00000563366 HMGB1P09429 215 aaKnown RBP11.55□□□□□ -0.56
UBFD1-202ENST00000563366 SRGNP10124 158 aa11.55□□□□□ -0.56
UBFD1-202ENST00000563366 PDE6AP16499 860 aa11.55□□□□□ -0.56
UBFD1-202ENST00000563366 GNAT2P19087 354 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms