RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 FGD1P98174 961 aa5.61□□□□□ -1.51
SHCBP1-202ENST00000563219 ALG1LQ6GMV1 187 aa5.61□□□□□ -1.51
SHCBP1-202ENST00000563219 NPM2Q86SE8 214 aaKnown RBP5.61□□□□□ -1.51
SHCBP1-202ENST00000563219 CCDC74AQ96AQ1 378 aa5.61□□□□□ -1.51
SHCBP1-202ENST00000563219 KRTAP4-12Q9BQ66 201 aa5.61□□□□□ -1.51
SHCBP1-202ENST00000563219 CORO1BQ9BR76 489 aa5.61□□□□□ -1.51
SHCBP1-202ENST00000563219 RAD18Q9NS91 495 aa5.61□□□□□ -1.51
SHCBP1-202ENST00000563219 PRKAG2Q9UGJ0 569 aa5.61□□□□□ -1.51
SHCBP1-202ENST00000563219 ACTL7BQ9Y614 415 aa5.61□□□□□ -1.51
SHCBP1-202ENST00000563219 RBM47A0AV96 593 aaKnown RBP5.6□□□□□ -1.51
SHCBP1-202ENST00000563219 ECEL1O95672 775 aa5.6□□□□□ -1.51
SHCBP1-202ENST00000563219 TAL1P17542 331 aaPredicted RBP5.6□□□□□ -1.51
SHCBP1-202ENST00000563219 ADMP35318 185 aa5.6□□□□□ -1.51
SHCBP1-202ENST00000563219 RPS26P11Q5JNZ5 115 aaPredicted RBP5.6□□□□□ -1.51
SHCBP1-202ENST00000563219 ZAR1Q86SH2 424 aa5.6□□□□□ -1.51
SHCBP1-202ENST00000563219 TBC1D32Q96NH3 1257 aa5.6□□□□□ -1.51
SHCBP1-202ENST00000563219 METTL22Q9BUU2 404 aaPredicted RBP5.6□□□□□ -1.51
SHCBP1-202ENST00000563219 BCL2L13Q9BXK5 485 aa5.6□□□□□ -1.51
SHCBP1-202ENST00000563219 SYNGAP1Q96PV0 1343 aa5.59□□□□□ -1.51
SHCBP1-202ENST00000563219 TMEM238LA0A1B0GVL6 79 aa5.59□□□□□ -1.51
SHCBP1-202ENST00000563219 PAX4O43316 350 aa5.59□□□□□ -1.51
SHCBP1-202ENST00000563219 PRPF40AO75400 957 aaKnown RBP5.59□□□□□ -1.51
SHCBP1-202ENST00000563219 LDHBP07195 334 aaKnown RBP5.59□□□□□ -1.51
SHCBP1-202ENST00000563219 NFICP08651 508 aa5.59□□□□□ -1.51
SHCBP1-202ENST00000563219 ATP2B2Q01814 1243 aa5.59□□□□□ -1.51
SHCBP1-202ENST00000563219 MAP7Q14244 749 aa5.59□□□□□ -1.51
SHCBP1-202ENST00000563219 MSMPQ1L6U9 139 aa5.59□□□□□ -1.51
SHCBP1-202ENST00000563219 AKAP4Q5JQC9 854 aa5.59□□□□□ -1.51
SHCBP1-202ENST00000563219 PRPF40BQ6NWY9 871 aaKnown RBP5.59□□□□□ -1.51
SHCBP1-202ENST00000563219 DYMQ7RTS9 669 aa5.59□□□□□ -1.51
SHCBP1-202ENST00000563219 GATA6Q92908 595 aa5.59□□□□□ -1.51
SHCBP1-202ENST00000563219 SEMA6CQ9H3T2 930 aa5.59□□□□□ -1.51
SHCBP1-202ENST00000563219 GSX1Q9H4S2 264 aaPredicted RBP5.59□□□□□ -1.51
SHCBP1-202ENST00000563219 ACSS3Q9H6R3 686 aa5.59□□□□□ -1.51
SHCBP1-202ENST00000563219 ABCB6Q9NP58 842 aa5.59□□□□□ -1.51
SHCBP1-202ENST00000563219 FAM105AQ9NUU6 356 aa5.59□□□□□ -1.51
SHCBP1-202ENST00000563219 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.58□□□□□ -1.52
SHCBP1-202ENST00000563219 CYP26A1O43174 497 aa5.58□□□□□ -1.52
SHCBP1-202ENST00000563219 AOC2O75106 756 aa5.58□□□□□ -1.52
SHCBP1-202ENST00000563219 AP3B2Q13367 1082 aa5.58□□□□□ -1.52
SHCBP1-202ENST00000563219 SETDB2Q96T68 719 aa5.58□□□□□ -1.52
SHCBP1-202ENST00000563219 WWC3Q9ULE0 1092 aa5.58□□□□□ -1.52
SHCBP1-202ENST00000563219 TRAK1Q9UPV9 953 aa5.58□□□□□ -1.52
SHCBP1-202ENST00000563219 FAM170BA6NMN3 283 aa5.57□□□□□ -1.52
SHCBP1-202ENST00000563219 GADD45BO75293 160 aaPredicted RBP5.57□□□□□ -1.52
SHCBP1-202ENST00000563219 PRNPP04156 253 aa5.57□□□□□ -1.52
SHCBP1-202ENST00000563219 ZNF16P17020 682 aaPredicted RBP5.57□□□□□ -1.52
SHCBP1-202ENST00000563219 ASPAP45381 313 aa5.57□□□□□ -1.52
SHCBP1-202ENST00000563219 FAAP100Q0VG06 881 aa5.57□□□□□ -1.52
SHCBP1-202ENST00000563219 GRM2Q14416 872 aa5.57□□□□□ -1.52
SHCBP1-202ENST00000563219 ZNF326Q5BKZ1 582 aaKnown RBP5.57□□□□□ -1.52
SHCBP1-202ENST00000563219 DUSP27Q5VZP5 1158 aa5.57□□□□□ -1.52
SHCBP1-202ENST00000563219 SEZ6L2Q6UXD5 910 aa5.57□□□□□ -1.52
SHCBP1-202ENST00000563219 GLIS3Q8NEA6 775 aa5.57□□□□□ -1.52
SHCBP1-202ENST00000563219 EPS8L3Q8TE67 593 aaKnown RBP5.57□□□□□ -1.52
SHCBP1-202ENST00000563219 GIPC2Q8TF65 315 aa5.57□□□□□ -1.52
SHCBP1-202ENST00000563219 FRMD6Q96NE9 622 aa5.57□□□□□ -1.52
SHCBP1-202ENST00000563219 FMNL2Q96PY5 1086 aa5.57□□□□□ -1.52
SHCBP1-202ENST00000563219 WDR18Q9BV38 432 aa5.57□□□□□ -1.52
SHCBP1-202ENST00000563219 CCDC39Q9UFE4 941 aa5.57□□□□□ -1.52
SHCBP1-202ENST00000563219 RAB6AP20340 208 aa5.56□□□□□ -1.52
SHCBP1-202ENST00000563219 TAGLNQ01995 201 aaKnown RBP5.56□□□□□ -1.52
SHCBP1-202ENST00000563219 CYP27A1Q02318 531 aa5.56□□□□□ -1.52
SHCBP1-202ENST00000563219 PDE3AQ14432 1141 aa5.56□□□□□ -1.52
SHCBP1-202ENST00000563219 DUSP9Q99956 384 aaKnown RBP5.56□□□□□ -1.52
SHCBP1-202ENST00000563219 GOLGA2P5Q9HBQ8 144 aa5.56□□□□□ -1.52
SHCBP1-202ENST00000563219 C1GALT1Q9NS00 363 aa5.56□□□□□ -1.52
SHCBP1-202ENST00000563219 BSDC1Q9NW68 430 aaPredicted RBP5.56□□□□□ -1.52
SHCBP1-202ENST00000563219 PPP4R2Q9NY27 417 aa5.56□□□□□ -1.52
SHCBP1-202ENST00000563219 ADGRE2Q9UHX3 823 aa5.56□□□□□ -1.52
SHCBP1-202ENST00000563219 PPP1R9AQ9ULJ8 1098 aa5.56□□□□□ -1.52
SHCBP1-202ENST00000563219 ANGEL1Q9UNK9 670 aaKnown RBP5.56□□□□□ -1.52
SHCBP1-202ENST00000563219 AP4E1Q9UPM8 1137 aa5.56□□□□□ -1.52
SHCBP1-202ENST00000563219 GIPC1O14908 333 aa5.55□□□□□ -1.52
SHCBP1-202ENST00000563219 GNA15P30679 374 aa5.55□□□□□ -1.52
SHCBP1-202ENST00000563219 TXKP42681 527 aa5.55□□□□□ -1.52
SHCBP1-202ENST00000563219 DAB2P98082 770 aa5.55□□□□□ -1.52
SHCBP1-202ENST00000563219 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.55□□□□□ -1.52
SHCBP1-202ENST00000563219 KRTAP1-3Q8IUG1 177 aa5.55□□□□□ -1.52
SHCBP1-202ENST00000563219 WDR89Q96FK6 387 aaPredicted RBP5.55□□□□□ -1.52
SHCBP1-202ENST00000563219 NLRP2Q9NX02 1062 aa5.55□□□□□ -1.52
SHCBP1-202ENST00000563219 DYNC1LI2O43237 492 aaPredicted RBP5.54□□□□□ -1.52
SHCBP1-202ENST00000563219 SLFN14P0C7P3 912 aa5.54□□□□□ -1.52
SHCBP1-202ENST00000563219 LIG1P18858 919 aa5.54□□□□□ -1.52
SHCBP1-202ENST00000563219 ZNF157P51786 506 aaPredicted RBP5.54□□□□□ -1.52
SHCBP1-202ENST00000563219 LCE3BQ5TA77 95 aa5.54□□□□□ -1.52
SHCBP1-202ENST00000563219 OGFOD3Q6PK18 319 aa5.54□□□□□ -1.52
SHCBP1-202ENST00000563219 PI16Q6UXB8 463 aa5.54□□□□□ -1.52
SHCBP1-202ENST00000563219 DTHD1Q6ZMT9 781 aa5.54□□□□□ -1.52
SHCBP1-202ENST00000563219 NFXL1Q6ZNB6 911 aa5.54□□□□□ -1.52
SHCBP1-202ENST00000563219 ZNF765Q7L2R6 523 aa5.54□□□□□ -1.52
SHCBP1-202ENST00000563219 TMC4Q7Z404 712 aa5.54□□□□□ -1.52
SHCBP1-202ENST00000563219 KRTAP19-1Q8IUB9 90 aa5.54□□□□□ -1.52
SHCBP1-202ENST00000563219 ABI1Q8IZP0 508 aa5.54□□□□□ -1.52
SHCBP1-202ENST00000563219 FBXL18Q96ME1 805 aa5.54□□□□□ -1.52
SHCBP1-202ENST00000563219 SRCIN1Q9C0H9 1055 aa5.54□□□□□ -1.52
SHCBP1-202ENST00000563219 CCDC86Q9H6F5 360 aaKnown RBP5.54□□□□□ -1.52
SHCBP1-202ENST00000563219 CRIM1Q9NZV1 1036 aa5.54□□□□□ -1.52
SHCBP1-202ENST00000563219 PARP2Q9UGN5 583 aa5.54□□□□□ -1.52
SHCBP1-202ENST00000563219 SPG7Q9UQ90 795 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms