RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 SLFNL1Q499Z3 407 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 TJAP1Q5JTD0 557 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 CCDC158Q5M9N0 1113 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 CCDC102BQ68D86 513 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 MSL1Q68DK7 614 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 PADI6Q6TGC4 694 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 PI16Q6UXB8 463 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 TPTE2Q6XPS3 522 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 NBPF5PQ86XG9 351 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-210ENST00000561817 CELF1Q92879 486 aaKnown RBP7.86□□□□□ -1.15
CAPN3-210ENST00000561817 TTC14Q96N46 770 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 SEC62Q99442 399 aaKnown RBP7.86□□□□□ -1.15
CAPN3-210ENST00000561817 GZF1Q9H116 711 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-210ENST00000561817 HELLSQ9NRZ9 838 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 BSDC1Q9NW68 430 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-210ENST00000561817 RBM8AQ9Y5S9 174 aaKnown RBP7.86□□□□□ -1.15
CAPN3-210ENST00000561817 DOCK2Q92608 1830 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 NRXN2Q9P2S2 1712 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 MYH7P12883 1935 aa7.86□□□□□ -1.15
CAPN3-210ENST00000561817 RPAP1Q9BWH6 1393 aaPredicted RBP7.85□□□□□ -1.15
CAPN3-210ENST00000561817 MYO5AQ9Y4I1 1855 aaKnown RBP7.85□□□□□ -1.15
CAPN3-210ENST00000561817 ZNF804BA4D1E1 1349 aa7.85□□□□□ -1.15
CAPN3-210ENST00000561817 PNPLA7Q6ZV29 1317 aa7.85□□□□□ -1.15
CAPN3-210ENST00000561817 WTIPA6NIX2 430 aaPredicted RBP7.85□□□□□ -1.15
CAPN3-210ENST00000561817 FOXP2O15409 715 aa7.85□□□□□ -1.15
CAPN3-210ENST00000561817 RNF113AO15541 343 aaKnown RBP7.85□□□□□ -1.15
CAPN3-210ENST00000561817 CYP2E1P05181 493 aaPredicted RBP7.85□□□□□ -1.15
CAPN3-210ENST00000561817 IGHMBP2P38935 993 aaKnown RBP7.85□□□□□ -1.15
CAPN3-210ENST00000561817 DDR1Q08345 913 aa7.85□□□□□ -1.15
CAPN3-210ENST00000561817 COL9A3Q14050 684 aaPredicted RBP7.85□□□□□ -1.15
CAPN3-210ENST00000561817 MCMDC2Q4G0Z9 681 aa7.85□□□□□ -1.15
CAPN3-210ENST00000561817 TTC39AQ5SRH9 613 aa7.85□□□□□ -1.15
CAPN3-210ENST00000561817 CREB3L3Q68CJ9 461 aa7.85□□□□□ -1.15
CAPN3-210ENST00000561817 PRR5LQ6MZQ0 368 aa7.85□□□□□ -1.15
CAPN3-210ENST00000561817 CCDC129Q6ZRS4 1044 aa7.85□□□□□ -1.15
CAPN3-210ENST00000561817 CDC5LQ99459 802 aaKnown RBP7.85□□□□□ -1.15
CAPN3-210ENST00000561817 MPHOSPH8Q99549 860 aa7.85□□□□□ -1.15
CAPN3-210ENST00000561817 TM6SF1Q9BZW5 370 aa7.85□□□□□ -1.15
CAPN3-210ENST00000561817 PDGFDQ9GZP0 370 aaPredicted RBP7.85□□□□□ -1.15
CAPN3-210ENST00000561817 IL21Q9HBE4 155 aa7.85□□□□□ -1.15
CAPN3-210ENST00000561817 GPBP1L1Q9HC44 474 aaPredicted RBP7.85□□□□□ -1.15
CAPN3-210ENST00000561817 PIH1D3Q9NQM4 214 aaKnown RBP7.85□□□□□ -1.15
CAPN3-210ENST00000561817 MINPP1Q9UNW1 487 aa7.85□□□□□ -1.15
CAPN3-210ENST00000561817 TAF6LQ9Y6J9 622 aa7.85□□□□□ -1.15
CAPN3-210ENST00000561817 MAST3O60307 1309 aa7.84□□□□□ -1.15
CAPN3-210ENST00000561817 COL1A1P02452 1464 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-210ENST00000561817 TCRBV5S4A2TA0A5A2 114 aa7.84□□□□□ -1.15
CAPN3-210ENST00000561817 KLRG2A4D1S0 409 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-210ENST00000561817 M0R2C6 588 aa7.84□□□□□ -1.15
CAPN3-210ENST00000561817 POLRMTO00411 1230 aaKnown RBP7.84□□□□□ -1.15
CAPN3-210ENST00000561817 SLC27A2O14975 620 aa7.84□□□□□ -1.15
CAPN3-210ENST00000561817 UQCRFS1P1P0C7P4 283 aa7.84□□□□□ -1.15
CAPN3-210ENST00000561817 SLC5A1P13866 664 aa7.84□□□□□ -1.15
CAPN3-210ENST00000561817 NEK4P51957 841 aa7.84□□□□□ -1.15
CAPN3-210ENST00000561817 RPS8P62241 208 aaKnown RBP7.84□□□□□ -1.15
CAPN3-210ENST00000561817 CUL4AQ13619 759 aa7.84□□□□□ -1.15
CAPN3-210ENST00000561817 ADCK5Q3MIX3 580 aa7.84□□□□□ -1.15
CAPN3-210ENST00000561817 CRY2Q49AN0 593 aa7.84□□□□□ -1.15
CAPN3-210ENST00000561817 PRPF40BQ6NWY9 871 aaKnown RBP7.84□□□□□ -1.15
CAPN3-210ENST00000561817 KIAA1211Q6ZU35 1233 aa7.84□□□□□ -1.15
CAPN3-210ENST00000561817 ANKRD18AQ8IVF6 992 aa7.84□□□□□ -1.15
CAPN3-210ENST00000561817 SLF2Q8IX21 1173 aa7.84□□□□□ -1.15
CAPN3-210ENST00000561817 CCDC24Q8N4L8 307 aa7.84□□□□□ -1.15
CAPN3-210ENST00000561817 OSBP2Q969R2 916 aa7.84□□□□□ -1.15
CAPN3-210ENST00000561817 NLRP3Q96P20 1036 aa7.84□□□□□ -1.15
CAPN3-210ENST00000561817 MTRQ99707 1265 aa7.84□□□□□ -1.15
CAPN3-210ENST00000561817 SLKQ9H2G2 1235 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-210ENST00000561817 HMG20BQ9P0W2 317 aa7.84□□□□□ -1.15
CAPN3-210ENST00000561817 ANKRD31Q8N7Z5 1873 aa7.83□□□□□ -1.16
CAPN3-210ENST00000561817 ZFYP08048 801 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-210ENST00000561817 HMGB2P26583 209 aaKnown RBP7.83□□□□□ -1.16
CAPN3-210ENST00000561817 ADD2P35612 726 aa7.83□□□□□ -1.16
CAPN3-210ENST00000561817 MLLT3P42568 568 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-210ENST00000561817 MCM2P49736 904 aa7.83□□□□□ -1.16
CAPN3-210ENST00000561817 FKBP4Q02790 459 aaKnown RBP eCLIP7.83□□□□□ -1.16
CAPN3-210ENST00000561817 RASGRF1Q13972 1273 aa7.83□□□□□ -1.16
CAPN3-210ENST00000561817 UBE4AQ14139 1066 aa7.83□□□□□ -1.16
CAPN3-210ENST00000561817 GORABQ5T7V8 394 aa7.83□□□□□ -1.16
CAPN3-210ENST00000561817 VPS53Q5VIR6 699 aa7.83□□□□□ -1.16
CAPN3-210ENST00000561817 FBXO33Q7Z6M2 555 aa7.83□□□□□ -1.16
CAPN3-210ENST00000561817 SLC51AQ86UW1 340 aa7.83□□□□□ -1.16
CAPN3-210ENST00000561817 COL23A1Q86Y22 540 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-210ENST00000561817 FAM177A1Q8N128 213 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-210ENST00000561817 DSCC1Q9BVC3 393 aa7.83□□□□□ -1.16
CAPN3-210ENST00000561817 UPF3BQ9BZI7 483 aaKnown RBP7.83□□□□□ -1.16
CAPN3-210ENST00000561817 CHMP5Q9NZZ3 219 aa7.83□□□□□ -1.16
CAPN3-210ENST00000561817 PPP1R1BQ9UD71 204 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-210ENST00000561817 LRRC37AA6NMS7 1700 aa7.82□□□□□ -1.16
CAPN3-210ENST00000561817 SERPINB2P05120 415 aa7.82□□□□□ -1.16
CAPN3-210ENST00000561817 GTF2E1P29083 439 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-210ENST00000561817 HOXA10P31260 410 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-210ENST00000561817 APLP1P51693 650 aa7.82□□□□□ -1.16
CAPN3-210ENST00000561817 UBE3CQ15386 1083 aa7.82□□□□□ -1.16
CAPN3-210ENST00000561817 NFKBIBQ15653 356 aa7.82□□□□□ -1.16
CAPN3-210ENST00000561817 SWT1Q5T5J6 900 aaKnown RBP7.82□□□□□ -1.16
CAPN3-210ENST00000561817 CNBD1Q8NA66 436 aa7.82□□□□□ -1.16
CAPN3-210ENST00000561817 SPATA5Q8NB90 893 aa7.82□□□□□ -1.16
CAPN3-210ENST00000561817 APPBP2Q92624 585 aa7.82□□□□□ -1.16
CAPN3-210ENST00000561817 TMX3Q96JJ7 454 aa7.82□□□□□ -1.16
CAPN3-210ENST00000561817 FAM84BQ96KN1 310 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms