RNA–Protein interactions for RNA: ENST00000561225.1

MARK3-225, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-225ENST00000561225 BSDC1Q9NW68 430 aaPredicted RBP10.1□□□□□ -0.79
MARK3-225ENST00000561225 ZNF804BA4D1E1 1349 aa10.09□□□□□ -0.79
MARK3-225ENST00000561225 KLRK1P26718 216 aa10.09□□□□□ -0.79
MARK3-225ENST00000561225 TMPOP42166 694 aaKnown RBP10.09□□□□□ -0.79
MARK3-225ENST00000561225 LMOD3Q0VAK6 560 aa10.09□□□□□ -0.79
MARK3-225ENST00000561225 LAPTM4AQ15012 233 aa10.09□□□□□ -0.79
MARK3-225ENST00000561225 DLGAP5Q15398 846 aa10.09□□□□□ -0.79
MARK3-225ENST00000561225 SUPT20HL1Q3ZLR7 823 aa10.09□□□□□ -0.79
MARK3-225ENST00000561225 NBPF12Q5TAG4 269 aaPredicted RBP10.09□□□□□ -0.79
MARK3-225ENST00000561225 RIC3Q7Z5B4 369 aa10.09□□□□□ -0.79
MARK3-225ENST00000561225 ANKRD13AQ8IZ07 590 aa10.09□□□□□ -0.79
MARK3-225ENST00000561225 MTMR14Q8NCE2 650 aa10.09□□□□□ -0.79
MARK3-225ENST00000561225 CCDC191Q8NCU4 936 aa10.09□□□□□ -0.79
MARK3-225ENST00000561225 BRI3BPQ8WY22 251 aa10.09□□□□□ -0.79
MARK3-225ENST00000561225 OPTNQ96CV9 577 aa10.09□□□□□ -0.79
MARK3-225ENST00000561225 CDC5LQ99459 802 aaKnown RBP10.09□□□□□ -0.79
MARK3-225ENST00000561225 MYD88Q99836 296 aa10.09□□□□□ -0.79
MARK3-225ENST00000561225 RABGEF1Q9UJ41 708 aa10.09□□□□□ -0.79
MARK3-225ENST00000561225 PCDHAC2Q9Y5I4 1007 aa10.09□□□□□ -0.79
MARK3-225ENST00000561225 CLRN2A0PK11 232 aa10.08□□□□□ -0.8
MARK3-225ENST00000561225 CTSWP56202 376 aa10.08□□□□□ -0.8
MARK3-225ENST00000561225 GTF2IP78347 998 aa10.08□□□□□ -0.8
MARK3-225ENST00000561225 TAF1CQ15572 869 aaPredicted RBP10.08□□□□□ -0.8
MARK3-225ENST00000561225 ARHGAP39Q9C0H5 1083 aa10.08□□□□□ -0.8
MARK3-225ENST00000561225 PHAXQ9H814 394 aaKnown RBP10.08□□□□□ -0.8
MARK3-225ENST00000561225 ELP3Q9H9T3 547 aa10.08□□□□□ -0.8
MARK3-225ENST00000561225 ZFYVE28Q9HCC9 887 aa10.08□□□□□ -0.8
MARK3-225ENST00000561225 CWC25Q9NXE8 425 aaPredicted RBP10.08□□□□□ -0.8
MARK3-225ENST00000561225 AOX1Q06278 1338 aa10.07□□□□□ -0.8
MARK3-225ENST00000561225 SOX1O00570 391 aaPredicted RBP10.07□□□□□ -0.8
MARK3-225ENST00000561225 COL9A1P20849 921 aa10.07□□□□□ -0.8
MARK3-225ENST00000561225 MTFR1Q15390 333 aa10.07□□□□□ -0.8
MARK3-225ENST00000561225 UBE2Q1Q7Z7E8 422 aa10.07□□□□□ -0.8
MARK3-225ENST00000561225 PACS2Q86VP3 889 aa10.07□□□□□ -0.8
MARK3-225ENST00000561225 FAM43AQ8N2R8 423 aa10.07□□□□□ -0.8
MARK3-225ENST00000561225 CERS5Q8N5B7 392 aa10.07□□□□□ -0.8
MARK3-225ENST00000561225 ANKK1Q8NFD2 765 aa10.07□□□□□ -0.8
MARK3-225ENST00000561225 TTLL11Q8NHH1 800 aa10.07□□□□□ -0.8
MARK3-225ENST00000561225 CCER1Q8TC90 406 aaPredicted RBP10.07□□□□□ -0.8
MARK3-225ENST00000561225 GREM2Q9H772 168 aa10.07□□□□□ -0.8
MARK3-225ENST00000561225 LEMD3Q9Y2U8 911 aa10.07□□□□□ -0.8
MARK3-225ENST00000561225 LAS1LQ9Y4W2 734 aaKnown RBP10.07□□□□□ -0.8
MARK3-225ENST00000561225 CCL15-CCL14A0A0B4J2E2 113 aa10.06□□□□□ -0.8
MARK3-225ENST00000561225 MYO1BO43795 1136 aa10.06□□□□□ -0.8
MARK3-225ENST00000561225 LACTBP83111 547 aaPredicted RBP10.06□□□□□ -0.8
MARK3-225ENST00000561225 RASA3Q14644 834 aa10.06□□□□□ -0.8
MARK3-225ENST00000561225 CCL15Q16663 113 aa10.06□□□□□ -0.8
MARK3-225ENST00000561225 PROX2Q3B8N5 592 aa10.06□□□□□ -0.8
MARK3-225ENST00000561225 CFAP100Q494V2 611 aa10.06□□□□□ -0.8
MARK3-225ENST00000561225 DUSP27Q5VZP5 1158 aa10.06□□□□□ -0.8
MARK3-225ENST00000561225 LRCH3Q96II8 777 aa10.06□□□□□ -0.8
MARK3-225ENST00000561225 PRMT6Q96LA8 375 aaPredicted RBP10.06□□□□□ -0.8
MARK3-225ENST00000561225 VEZTQ9HBM0 779 aa10.06□□□□□ -0.8
MARK3-225ENST00000561225 A0A1W2PPC1 479 aa10.05□□□□□ -0.8
MARK3-225ENST00000561225 TLR2O60603 784 aa10.05□□□□□ -0.8
MARK3-225ENST00000561225 GTF2A2P52657 109 aa10.05□□□□□ -0.8
MARK3-225ENST00000561225 NEUROD2Q15784 382 aa10.05□□□□□ -0.8
MARK3-225ENST00000561225 TRAF7Q6Q0C0 670 aa10.05□□□□□ -0.8
MARK3-225ENST00000561225 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.05□□□□□ -0.8
MARK3-225ENST00000561225 HTATIP2Q9BUP3 242 aa10.05□□□□□ -0.8
MARK3-225ENST00000561225 METTL22Q9BUU2 404 aaPredicted RBP10.05□□□□□ -0.8
MARK3-225ENST00000561225 CD209Q9NNX6 404 aa10.05□□□□□ -0.8
MARK3-225ENST00000561225 KIAA1468Q9P260 1216 aa10.05□□□□□ -0.8
MARK3-225ENST00000561225 OTOFQ9HC10 1997 aa10.05□□□□□ -0.8
MARK3-225ENST00000561225 SPTBN5Q9NRC6 3674 aaKnown RBP10.04□□□□□ -0.8
MARK3-225ENST00000561225 F8W031 263 aaPredicted RBP10.04□□□□□ -0.8
MARK3-225ENST00000561225 ZBTB7BO15156 539 aaPredicted RBP10.04□□□□□ -0.8
MARK3-225ENST00000561225 GNRH1P01148 92 aa10.04□□□□□ -0.8
MARK3-225ENST00000561225 GJA8P48165 433 aa10.04□□□□□ -0.8
MARK3-225ENST00000561225 PRMT2P55345 433 aa10.04□□□□□ -0.8
MARK3-225ENST00000561225 VGLL4Q14135 290 aa10.04□□□□□ -0.8
MARK3-225ENST00000561225 KIF22Q14807 665 aa10.04□□□□□ -0.8
MARK3-225ENST00000561225 LAPTM4BQ86VI4 370 aa10.04□□□□□ -0.8
MARK3-225ENST00000561225 NKX2-3Q8TAU0 364 aa10.04□□□□□ -0.8
MARK3-225ENST00000561225 NR2E3Q9Y5X4 410 aa10.04□□□□□ -0.8
MARK3-225ENST00000561225 ZSWIM8A7E2V4 1837 aa10.04□□□□□ -0.8
MARK3-225ENST00000561225 IRS2Q9Y4H2 1338 aa10.04□□□□□ -0.8
MARK3-225ENST00000561225 IGKV5-2P06315 115 aa10.03□□□□□ -0.8
MARK3-225ENST00000561225 GJB1P08034 283 aa10.03□□□□□ -0.8
MARK3-225ENST00000561225 CTGFP29279 349 aa10.03□□□□□ -0.8
MARK3-225ENST00000561225 IGHMBP2P38935 993 aaKnown RBP10.03□□□□□ -0.8
MARK3-225ENST00000561225 KCNC4Q03721 635 aa10.03□□□□□ -0.8
MARK3-225ENST00000561225 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.03□□□□□ -0.8
MARK3-225ENST00000561225 TEPSINQ96N21 525 aa10.03□□□□□ -0.8
MARK3-225ENST00000561225 ANKRD2Q9GZV1 360 aa10.03□□□□□ -0.8
MARK3-225ENST00000561225 ECM29Q5VYK3 1845 aa10.03□□□□□ -0.8
MARK3-225ENST00000561225 SPEF2Q9C093 1822 aa10.03□□□□□ -0.8
MARK3-225ENST00000561225 EYSQ5T1H1 3165 aa10.02□□□□□ -0.8
MARK3-225ENST00000561225 TRIM6-TRIM34B2RNG4 842 aa10.02□□□□□ -0.81
MARK3-225ENST00000561225 BTBD19C9JJ37 291 aa10.02□□□□□ -0.81
MARK3-225ENST00000561225 SNAP23O00161 211 aa10.02□□□□□ -0.81
MARK3-225ENST00000561225 LCE2BO14633 110 aa10.02□□□□□ -0.81
MARK3-225ENST00000561225 WDHD1O75717 1129 aaPredicted RBP10.02□□□□□ -0.81
MARK3-225ENST00000561225 BCAMP50895 628 aa10.02□□□□□ -0.81
MARK3-225ENST00000561225 FKBP1AP62942 108 aaKnown RBP10.02□□□□□ -0.81
MARK3-225ENST00000561225 TNFAIP1Q13829 316 aa10.02□□□□□ -0.81
MARK3-225ENST00000561225 TSR1Q2NL82 804 aaKnown RBP10.02□□□□□ -0.81
MARK3-225ENST00000561225 KCNV2Q8TDN2 545 aa10.02□□□□□ -0.81
MARK3-225ENST00000561225 ZCCHC17Q9NP64 241 aaKnown RBP10.02□□□□□ -0.81
MARK3-225ENST00000561225 MBIPQ9NS73 344 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms