RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 ADGRA1Q86SQ6 560 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 IFNL3Q8IZI9 196 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 LCORLQ8N3X6 602 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 MIGA1Q8NAN2 632 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 CRNKL1Q9BZJ0 848 aaKnown RBP10.25□□□□□ -0.77
TRAF3-209ENST00000560463 NAPBQ9H115 298 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 TAOK3Q9H2K8 898 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 ZSWIM6Q9HCJ5 1215 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 JAG2Q9Y219 1238 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 CYP46A1Q9Y6A2 500 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 SLC4A4Q9Y6R1 1079 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 MYO3BQ8WXR4 1341 aa10.25□□□□□ -0.77
TRAF3-209ENST00000560463 GPR75-ASB3A0A0A6YYF3 556 aa10.24□□□□□ -0.77
TRAF3-209ENST00000560463 CASTP20810 708 aaKnown RBP10.24□□□□□ -0.77
TRAF3-209ENST00000560463 HDLBPQ00341 1268 aaKnown RBP10.24□□□□□ -0.77
TRAF3-209ENST00000560463 DACT2Q5SW24 774 aa10.24□□□□□ -0.77
TRAF3-209ENST00000560463 HHIPL2Q6UWX4 724 aa10.24□□□□□ -0.77
TRAF3-209ENST00000560463 LARGE2Q8N3Y3 721 aa10.24□□□□□ -0.77
TRAF3-209ENST00000560463 FBXW7Q969H0 707 aa10.24□□□□□ -0.77
TRAF3-209ENST00000560463 JAKMIP1Q96N16 626 aaKnown RBP10.24□□□□□ -0.77
TRAF3-209ENST00000560463 TBC1D2Q9BYX2 928 aa10.24□□□□□ -0.77
TRAF3-209ENST00000560463 ALDH8A1Q9H2A2 487 aaPredicted RBP10.24□□□□□ -0.77
TRAF3-209ENST00000560463 ATP8A2Q9NTI2 1148 aa10.24□□□□□ -0.77
TRAF3-209ENST00000560463 BCS1LQ9Y276 419 aa10.24□□□□□ -0.77
TRAF3-209ENST00000560463 GAKO14976 1311 aa10.24□□□□□ -0.77
TRAF3-209ENST00000560463 TCHHQ07283 1943 aa10.23□□□□□ -0.77
TRAF3-209ENST00000560463 COL4A5P29400 1685 aa10.23□□□□□ -0.77
TRAF3-209ENST00000560463 K7ELQ4 463 aaPredicted RBP10.23□□□□□ -0.77
TRAF3-209ENST00000560463 TDO2P48775 406 aa10.23□□□□□ -0.77
TRAF3-209ENST00000560463 MMP14P50281 582 aa10.23□□□□□ -0.77
TRAF3-209ENST00000560463 GRIK5Q16478 980 aa10.23□□□□□ -0.77
TRAF3-209ENST00000560463 ADCK5Q3MIX3 580 aa10.23□□□□□ -0.77
TRAF3-209ENST00000560463 BLOC1S2Q6QNY1 142 aa10.23□□□□□ -0.77
TRAF3-209ENST00000560463 CERS5Q8N5B7 392 aa10.23□□□□□ -0.77
TRAF3-209ENST00000560463 NEK1Q96PY6 1258 aa10.23□□□□□ -0.77
TRAF3-209ENST00000560463 AATFQ9NY61 560 aaKnown RBP eCLIP10.23□□□□□ -0.77
TRAF3-209ENST00000560463 TTF2Q9UNY4 1162 aaKnown RBP10.23□□□□□ -0.77
TRAF3-209ENST00000560463 SIPA1L1O43166 1804 aa10.23□□□□□ -0.77
TRAF3-209ENST00000560463 E7EWF7 191 aa10.22□□□□□ -0.77
TRAF3-209ENST00000560463 RPS6KB1P23443 525 aa10.22□□□□□ -0.77
TRAF3-209ENST00000560463 DYNLL1P63167 89 aaKnown RBP10.22□□□□□ -0.77
TRAF3-209ENST00000560463 TRDNQ13061 729 aa10.22□□□□□ -0.77
TRAF3-209ENST00000560463 ANKRD1Q15327 319 aa10.22□□□□□ -0.77
TRAF3-209ENST00000560463 DIXDC1Q155Q3 683 aa10.22□□□□□ -0.77
TRAF3-209ENST00000560463 NIM1KQ8IY84 436 aa10.22□□□□□ -0.77
TRAF3-209ENST00000560463 NLGN2Q8NFZ4 835 aa10.22□□□□□ -0.77
TRAF3-209ENST00000560463 JDP2Q8WYK2 163 aa10.22□□□□□ -0.77
TRAF3-209ENST00000560463 TEKT1Q969V4 418 aa10.22□□□□□ -0.77
TRAF3-209ENST00000560463 TTC14Q96N46 770 aa10.22□□□□□ -0.77
TRAF3-209ENST00000560463 UPF3BQ9BZI7 483 aaKnown RBP10.22□□□□□ -0.77
TRAF3-209ENST00000560463 FHDC1Q9C0D6 1143 aaPredicted RBP10.22□□□□□ -0.77
TRAF3-209ENST00000560463 EPB41L4AQ9HCS5 686 aaPredicted RBP10.22□□□□□ -0.77
TRAF3-209ENST00000560463 ZNF277Q9NRM2 450 aaPredicted RBP10.22□□□□□ -0.77
TRAF3-209ENST00000560463 ANAPC4Q9UJX5 808 aa10.22□□□□□ -0.77
TRAF3-209ENST00000560463 ZNRF3Q9ULT6 936 aa10.22□□□□□ -0.77
TRAF3-209ENST00000560463 ATAD5Q96QE3 1844 aa10.21□□□□□ -0.77
TRAF3-209ENST00000560463 MYH15Q9Y2K3 1946 aa10.21□□□□□ -0.77
TRAF3-209ENST00000560463 YDJCA8MPS7 323 aa10.21□□□□□ -0.77
TRAF3-209ENST00000560463 NFKBIEO00221 500 aa10.21□□□□□ -0.77
TRAF3-209ENST00000560463 PRKAB2O43741 272 aa10.21□□□□□ -0.77
TRAF3-209ENST00000560463 VIL1P09327 827 aaKnown RBP10.21□□□□□ -0.77
TRAF3-209ENST00000560463 PCP11498 1178 aaKnown RBP10.21□□□□□ -0.77
TRAF3-209ENST00000560463 BTDP43251 543 aa10.21□□□□□ -0.77
TRAF3-209ENST00000560463 NT5C2P49902 561 aa10.21□□□□□ -0.77
TRAF3-209ENST00000560463 SBK1Q52WX2 424 aa10.21□□□□□ -0.77
TRAF3-209ENST00000560463 RSBN1LQ6PCB5 846 aaPredicted RBP10.21□□□□□ -0.77
TRAF3-209ENST00000560463 AMOTL1Q8IY63 956 aa10.21□□□□□ -0.77
TRAF3-209ENST00000560463 NCOA7Q8NI08 942 aa10.21□□□□□ -0.77
TRAF3-209ENST00000560463 SDR42E1Q8WUS8 393 aa10.21□□□□□ -0.77
TRAF3-209ENST00000560463 CNNM2Q9H8M5 875 aa10.21□□□□□ -0.77
TRAF3-209ENST00000560463 KCNQ5Q9NR82 932 aa10.21□□□□□ -0.77
TRAF3-209ENST00000560463 PDRG1Q9NUG6 133 aa10.21□□□□□ -0.77
TRAF3-209ENST00000560463 ARPP21Q9UBL0 812 aaPredicted RBP10.21□□□□□ -0.77
TRAF3-209ENST00000560463 SERPINA10Q9UK55 444 aa10.21□□□□□ -0.77
TRAF3-209ENST00000560463 WDR19Q8NEZ3 1342 aa10.21□□□□□ -0.78
TRAF3-209ENST00000560463 GREB1LQ9C091 1923 aaPredicted RBP10.21□□□□□ -0.78
TRAF3-209ENST00000560463 CD2BP2O95400 341 aaKnown RBP10.2□□□□□ -0.78
TRAF3-209ENST00000560463 USP5P45974 858 aa10.2□□□□□ -0.78
TRAF3-209ENST00000560463 TNIP1Q15025 636 aa10.2□□□□□ -0.78
TRAF3-209ENST00000560463 AKNAD1Q5T1N1 836 aa10.2□□□□□ -0.78
TRAF3-209ENST00000560463 MFSD6Q6ZSS7 791 aa10.2□□□□□ -0.78
TRAF3-209ENST00000560463 STOX1Q6ZVD7 989 aa10.2□□□□□ -0.78
TRAF3-209ENST00000560463 DHX32Q7L7V1 743 aaKnown RBP10.2□□□□□ -0.78
TRAF3-209ENST00000560463 RALYLQ86SE5 291 aaKnown RBP10.2□□□□□ -0.78
TRAF3-209ENST00000560463 FBXL16Q8N461 479 aa10.2□□□□□ -0.78
TRAF3-209ENST00000560463 AGBL3Q8NEM8 1001 aa10.2□□□□□ -0.78
TRAF3-209ENST00000560463 SH3RF3Q8TEJ3 882 aaPredicted RBP10.2□□□□□ -0.78
TRAF3-209ENST00000560463 ZSCAN31Q96LW9 406 aaPredicted RBP10.2□□□□□ -0.78
TRAF3-209ENST00000560463 ZDHHC15Q96MV8 337 aa10.2□□□□□ -0.78
TRAF3-209ENST00000560463 SYT17Q9BSW7 474 aa10.2□□□□□ -0.78
TRAF3-209ENST00000560463 KRT23Q9C075 422 aa10.2□□□□□ -0.78
TRAF3-209ENST00000560463 RNF41Q9H4P4 317 aaPredicted RBP10.2□□□□□ -0.78
TRAF3-209ENST00000560463 DCP1AQ9NPI6 582 aaPredicted RBP10.2□□□□□ -0.78
TRAF3-209ENST00000560463 DAGLAQ9Y4D2 1042 aa10.2□□□□□ -0.78
TRAF3-209ENST00000560463 SCN4AP35499 1836 aa10.19□□□□□ -0.78
TRAF3-209ENST00000560463 F8W031 263 aaPredicted RBP10.19□□□□□ -0.78
TRAF3-209ENST00000560463 SLC3A2P08195 630 aaKnown RBP10.19□□□□□ -0.78
TRAF3-209ENST00000560463 MCM5P33992 734 aa10.19□□□□□ -0.78
TRAF3-209ENST00000560463 CRKP46108 304 aa10.19□□□□□ -0.78
TRAF3-209ENST00000560463 AK2P54819 239 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms