RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CCDC175P0C221 793 aa15.18■□□□□ 0.02
TRAF3-208ENST00000560371 FNBP1Q96RU3 617 aa15.18■□□□□ 0.02
TRAF3-208ENST00000560371 AOPEPQ8N6M6 819 aa15.18■□□□□ 0.02
TRAF3-208ENST00000560371 SMCR8Q8TEV9 937 aaPredicted RBP15.18■□□□□ 0.02
TRAF3-208ENST00000560371 IBTKQ9P2D0 1353 aaPredicted RBP15.18■□□□□ 0.02
TRAF3-208ENST00000560371 ARL1P40616 181 aaPredicted RBP15.18■□□□□ 0.02
TRAF3-208ENST00000560371 TCIRG1Q13488 830 aa15.18■□□□□ 0.02
TRAF3-208ENST00000560371 SREK1Q8WXA9 508 aaKnown RBP15.18■□□□□ 0.02
TRAF3-208ENST00000560371 TRIM6Q9C030 488 aaPredicted RBP15.18■□□□□ 0.02
TRAF3-208ENST00000560371 ZSWIM4Q9H7M6 989 aa15.18■□□□□ 0.02
TRAF3-208ENST00000560371 RPS8P62241 208 aaKnown RBP15.18■□□□□ 0.02
TRAF3-208ENST00000560371 KIF5AQ12840 1032 aa15.18■□□□□ 0.02
TRAF3-208ENST00000560371 CEP135Q66GS9 1140 aa15.18■□□□□ 0.02
TRAF3-208ENST00000560371 SV2BQ7L1I2 683 aa15.18■□□□□ 0.02
TRAF3-208ENST00000560371 PLCB3Q01970 1234 aa15.17■□□□□ 0.02
TRAF3-208ENST00000560371 DCAF17Q5H9S7 520 aaPredicted RBP15.17■□□□□ 0.02
TRAF3-208ENST00000560371 MAATS1Q7Z4T9 603 aa15.17■□□□□ 0.02
TRAF3-208ENST00000560371 OTUD6BQ8N6M0 293 aa15.17■□□□□ 0.02
TRAF3-208ENST00000560371 IFT74Q96LB3 600 aa15.17■□□□□ 0.02
TRAF3-208ENST00000560371 TNNQ9UQP3 1299 aa15.17■□□□□ 0.02
TRAF3-208ENST00000560371 BCS1LQ9Y276 419 aa15.17■□□□□ 0.02
TRAF3-208ENST00000560371 TMEM2Q9UHN6 1383 aa15.17■□□□□ 0.02
TRAF3-208ENST00000560371 MYCLP12524 364 aaPredicted RBP15.17■□□□□ 0.02
TRAF3-208ENST00000560371 FERP16591 822 aa15.17■□□□□ 0.02
TRAF3-208ENST00000560371 CCDC117Q8IWD4 279 aaPredicted RBP15.17■□□□□ 0.02
TRAF3-208ENST00000560371 HARSP12081 509 aaKnown RBP15.17■□□□□ 0.02
TRAF3-208ENST00000560371 CKAP4Q07065 602 aaKnown RBP15.17■□□□□ 0.02
TRAF3-208ENST00000560371 GCKRQ14397 625 aa15.17■□□□□ 0.02
TRAF3-208ENST00000560371 MSL1Q68DK7 614 aa15.17■□□□□ 0.02
TRAF3-208ENST00000560371 CTR9Q6PD62 1173 aa15.17■□□□□ 0.02
TRAF3-208ENST00000560371 CHL1O00533 1208 aa15.17■□□□□ 0.02
TRAF3-208ENST00000560371 DKC1O60832 514 aaKnown RBP eCLIP15.17■□□□□ 0.02
TRAF3-208ENST00000560371 DEXIO95424 95 aa15.17■□□□□ 0.02
TRAF3-208ENST00000560371 CCDC42Q96M95 316 aa15.17■□□□□ 0.02
TRAF3-208ENST00000560371 GCC2Q8IWJ2 1684 aa15.17■□□□□ 0.02
TRAF3-208ENST00000560371 CCDC169A6NNP5 214 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 GJC1P36383 396 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 UBXN1Q04323 297 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 CCDC129Q6ZRS4 1044 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 GSTA5Q7RTV2 222 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 LMBR1Q8WVP7 490 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 CHMP2AO43633 222 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 CCT6AP40227 531 aaKnown RBP15.16■□□□□ 0.02
TRAF3-208ENST00000560371 CSADQ9Y600 493 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 IRX3P78415 501 aaPredicted RBP15.16■□□□□ 0.02
TRAF3-208ENST00000560371 ZNF174Q15697 407 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 SMC5Q8IY18 1101 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 CCDC155Q8N6L0 562 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 A0A1W2PRG0 241 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 ZBTB7BO15156 539 aaPredicted RBP15.16■□□□□ 0.02
TRAF3-208ENST00000560371 HAUS3Q68CZ6 603 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 FAM200AQ8TCP9 573 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 ZBED4O75132 1171 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 SLC8A3P57103 927 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 TNFAIP1Q13829 316 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 STX17P56962 302 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 FMNL3Q8IVF7 1028 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 SPATA5Q8NB90 893 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 TEKT1Q969V4 418 aa15.16■□□□□ 0.02
TRAF3-208ENST00000560371 TMEM110-MUSTN1A8MSY1 372 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 MFSD14BQ5SR56 506 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 TACC1O75410 805 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 DNAJC25Q9H1X3 360 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 ERICH4A6NGS2 130 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 BIRC3Q13489 604 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 SNX21Q969T3 373 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 RASAL2Q9UJF2 1139 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 TTF2Q9UNY4 1162 aaKnown RBP15.15■□□□□ 0.02
TRAF3-208ENST00000560371 PRDM1O75626 825 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 PLCD1P51178 756 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 GTF2IP78347 998 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 RILPL1Q5EBL4 403 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 NEO1Q92859 1461 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 USH1GQ495M9 461 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 KBTBD3Q8NAB2 608 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 CEP63Q96MT8 703 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 ATL3Q6DD88 541 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 CCDC50Q8IVM0 306 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 TGFBRAP1Q8WUH2 860 aa15.15■□□□□ 0.02
TRAF3-208ENST00000560371 IQCGQ9H095 443 aaKnown RBP15.15■□□□□ 0.02
TRAF3-208ENST00000560371 KRT86O43790 486 aa15.14■□□□□ 0.01
TRAF3-208ENST00000560371 KRT83P78385 493 aa15.14■□□□□ 0.01
TRAF3-208ENST00000560371 WDR44Q5JSH3 913 aa15.14■□□□□ 0.01
TRAF3-208ENST00000560371 ATP2A1O14983 1001 aa15.14■□□□□ 0.01
TRAF3-208ENST00000560371 CTSWP56202 376 aa15.14■□□□□ 0.01
TRAF3-208ENST00000560371 TRAF5O00463 557 aa15.14■□□□□ 0.01
TRAF3-208ENST00000560371 EPB41P11171 864 aaKnown RBP15.14■□□□□ 0.01
TRAF3-208ENST00000560371 INTS4Q96HW7 963 aaKnown RBP15.14■□□□□ 0.01
TRAF3-208ENST00000560371 QTRT2Q9H974 415 aaKnown RBP15.14■□□□□ 0.01
TRAF3-208ENST00000560371 V9GY48 417 aaPredicted RBP15.14■□□□□ 0.01
TRAF3-208ENST00000560371 RPS6KB1P23443 525 aa15.14■□□□□ 0.01
TRAF3-208ENST00000560371 SYT1P21579 422 aa15.14■□□□□ 0.01
TRAF3-208ENST00000560371 DISP1Q96F81 1524 aa15.14■□□□□ 0.01
TRAF3-208ENST00000560371 AK9Q5TCS8 1911 aa15.14■□□□□ 0.01
TRAF3-208ENST00000560371 ARHGEF35A5YM69 484 aa15.13■□□□□ 0.01
TRAF3-208ENST00000560371 LTKP29376 864 aa15.13■□□□□ 0.01
TRAF3-208ENST00000560371 STRN3Q13033 797 aa15.13■□□□□ 0.01
TRAF3-208ENST00000560371 MAPKAPK5Q8IW41 473 aa15.13■□□□□ 0.01
TRAF3-208ENST00000560371 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.13■□□□□ 0.01
TRAF3-208ENST00000560371 SUCLG2Q96I99 432 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms