RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 BTDP43251 543 aa13.25□□□□□ -0.29
TPM1-217ENST00000559108 RBM5P52756 815 aaKnown RBP eCLIP13.25□□□□□ -0.29
TPM1-217ENST00000559108 CHADLQ6NUI6 762 aa13.25□□□□□ -0.29
TPM1-217ENST00000559108 CDC42EP5Q6NZY7 148 aa13.25□□□□□ -0.29
TPM1-217ENST00000559108 KBTBD3Q8NAB2 608 aa13.25□□□□□ -0.29
TPM1-217ENST00000559108 FAM163AQ96GL9 167 aaPredicted RBP13.25□□□□□ -0.29
TPM1-217ENST00000559108 GPATCH3Q96I76 525 aa13.25□□□□□ -0.29
TPM1-217ENST00000559108 MRIQ9BWK5 157 aa13.25□□□□□ -0.29
TPM1-217ENST00000559108 ZNF70Q9UC06 446 aaPredicted RBP13.25□□□□□ -0.29
TPM1-217ENST00000559108 MYH1P12882 1939 aa13.25□□□□□ -0.29
TPM1-217ENST00000559108 MAST3O60307 1309 aa13.24□□□□□ -0.29
TPM1-217ENST00000559108 PASKQ96RG2 1323 aa13.24□□□□□ -0.29
TPM1-217ENST00000559108 ZNF532Q9HCE3 1301 aa13.24□□□□□ -0.29
TPM1-217ENST00000559108 CYP7A1P22680 504 aa13.24□□□□□ -0.29
TPM1-217ENST00000559108 TTC22Q5TAA0 569 aa13.24□□□□□ -0.29
TPM1-217ENST00000559108 PRAMEF18Q5VWM3 479 aa13.24□□□□□ -0.29
TPM1-217ENST00000559108 SPTY2D1Q68D10 685 aaPredicted RBP13.24□□□□□ -0.29
TPM1-217ENST00000559108 NAA16Q6N069 864 aaPredicted RBP13.24□□□□□ -0.29
TPM1-217ENST00000559108 ZFPM1Q8IX07 1006 aa13.24□□□□□ -0.29
TPM1-217ENST00000559108 MIGA1Q8NAN2 632 aa13.24□□□□□ -0.29
TPM1-217ENST00000559108 RBM46Q8TBY0 533 aaKnown RBP13.24□□□□□ -0.29
TPM1-217ENST00000559108 DDX4Q9NQI0 724 aaKnown RBP13.24□□□□□ -0.29
TPM1-217ENST00000559108 CLEC11AQ9Y240 323 aa13.24□□□□□ -0.29
TPM1-217ENST00000559108 ERC2O15083 957 aa13.23□□□□□ -0.29
TPM1-217ENST00000559108 WDHD1O75717 1129 aaPredicted RBP13.23□□□□□ -0.29
TPM1-217ENST00000559108 SLURP2P0DP57 97 aa13.23□□□□□ -0.29
TPM1-217ENST00000559108 SLC9C2Q5TAH2 1124 aa13.23□□□□□ -0.29
TPM1-217ENST00000559108 USP48Q86UV5 1035 aa13.23□□□□□ -0.29
TPM1-217ENST00000559108 CNTROBQ8N137 903 aa13.23□□□□□ -0.29
TPM1-217ENST00000559108 SH3RF3Q8TEJ3 882 aaPredicted RBP13.23□□□□□ -0.29
TPM1-217ENST00000559108 ZC3H15Q8WU90 426 aaKnown RBP13.23□□□□□ -0.29
TPM1-217ENST00000559108 SEC62Q99442 399 aaKnown RBP13.23□□□□□ -0.29
TPM1-217ENST00000559108 RIOK1Q9BRS2 568 aaKnown RBP13.23□□□□□ -0.29
TPM1-217ENST00000559108 AATFQ9NY61 560 aaKnown RBP eCLIP13.23□□□□□ -0.29
TPM1-217ENST00000559108 ZBTB47Q9UFB7 747 aaPredicted RBP13.23□□□□□ -0.29
TPM1-217ENST00000559108 FAM198AQ9UFP1 575 aa13.23□□□□□ -0.29
TPM1-217ENST00000559108 PITPNM2Q9BZ72 1349 aa13.22□□□□□ -0.29
TPM1-217ENST00000559108 M0R2C6 588 aa13.22□□□□□ -0.29
TPM1-217ENST00000559108 EVX2Q03828 476 aa13.22□□□□□ -0.29
TPM1-217ENST00000559108 MAP3K12Q12852 859 aa13.22□□□□□ -0.29
TPM1-217ENST00000559108 TTF1Q15361 905 aaPredicted RBP13.22□□□□□ -0.29
TPM1-217ENST00000559108 LCORLQ8N3X6 602 aa13.22□□□□□ -0.29
TPM1-217ENST00000559108 TEPSINQ96N21 525 aa13.22□□□□□ -0.29
TPM1-217ENST00000559108 PUS7LQ9H0K6 701 aaKnown RBP13.22□□□□□ -0.29
TPM1-217ENST00000559108 IL25Q9H293 177 aa13.22□□□□□ -0.29
TPM1-217ENST00000559108 VEZTQ9HBM0 779 aa13.22□□□□□ -0.29
TPM1-217ENST00000559108 FZD1Q9UP38 647 aa13.22□□□□□ -0.29
TPM1-217ENST00000559108 TCP10L2B9ZVM9 353 aa13.21□□□□□ -0.29
TPM1-217ENST00000559108 SDSP20132 328 aa13.21□□□□□ -0.29
TPM1-217ENST00000559108 RGS3P49796 1198 aa13.21□□□□□ -0.29
TPM1-217ENST00000559108 MMP14P50281 582 aa13.21□□□□□ -0.29
TPM1-217ENST00000559108 PPP4CP60510 307 aa13.21□□□□□ -0.29
TPM1-217ENST00000559108 SH3BP5LQ7L8J4 393 aa13.21□□□□□ -0.29
TPM1-217ENST00000559108 KRT26Q7Z3Y9 468 aa13.21□□□□□ -0.29
TPM1-217ENST00000559108 OSBP2Q969R2 916 aa13.21□□□□□ -0.29
TPM1-217ENST00000559108 TMEM39BQ9GZU3 492 aa13.21□□□□□ -0.29
TPM1-217ENST00000559108 USP40Q9NVE5 1235 aa13.21□□□□□ -0.29
TPM1-217ENST00000559108 LAMB1P07942 1786 aa13.21□□□□□ -0.29
TPM1-217ENST00000559108 SMIM22K7EJ46 135 aa13.2□□□□□ -0.3
TPM1-217ENST00000559108 FOXP2O15409 715 aa13.2□□□□□ -0.3
TPM1-217ENST00000559108 RNF113AO15541 343 aaKnown RBP13.2□□□□□ -0.3
TPM1-217ENST00000559108 PRKAB2O43741 272 aa13.2□□□□□ -0.3
TPM1-217ENST00000559108 SMC1BQ8NDV3 1235 aa13.2□□□□□ -0.3
TPM1-217ENST00000559108 CDCA5Q96FF9 252 aa13.2□□□□□ -0.3
TPM1-217ENST00000559108 FAM227BQ96M60 508 aa13.2□□□□□ -0.3
TPM1-217ENST00000559108 FSD1Q9BTV5 496 aa13.2□□□□□ -0.3
TPM1-217ENST00000559108 ARMT1Q9H993 441 aa13.2□□□□□ -0.3
TPM1-217ENST00000559108 ATRNL1Q5VV63 1379 aa13.2□□□□□ -0.3
TPM1-217ENST00000559108 A0A0D9SFI3 127 aa13.19□□□□□ -0.3
TPM1-217ENST00000559108 MBD4O95243 580 aa13.19□□□□□ -0.3
TPM1-217ENST00000559108 GSTO1P78417 241 aa13.19□□□□□ -0.3
TPM1-217ENST00000559108 TCP10Q12799 353 aa13.19□□□□□ -0.3
TPM1-217ENST00000559108 RASA3Q14644 834 aa13.19□□□□□ -0.3
TPM1-217ENST00000559108 UBE3CQ15386 1083 aa13.19□□□□□ -0.3
TPM1-217ENST00000559108 ZMYM1Q5SVZ6 1142 aa13.19□□□□□ -0.3
TPM1-217ENST00000559108 NBPF12Q5TAG4 269 aaPredicted RBP13.19□□□□□ -0.3
TPM1-217ENST00000559108 CST9Q5W186 159 aa13.19□□□□□ -0.3
TPM1-217ENST00000559108 CCDC129Q6ZRS4 1044 aa13.19□□□□□ -0.3
TPM1-217ENST00000559108 MOB2Q70IA6 237 aa13.19□□□□□ -0.3
TPM1-217ENST00000559108 DCPSQ96C86 337 aaKnown RBP13.19□□□□□ -0.3
TPM1-217ENST00000559108 EVI5LQ96CN4 794 aa13.19□□□□□ -0.3
TPM1-217ENST00000559108 DEFB129Q9H1M3 183 aa13.19□□□□□ -0.3
TPM1-217ENST00000559108 TRIM6-TRIM34B2RNG4 842 aa13.18□□□□□ -0.3
TPM1-217ENST00000559108 LDHCP07864 332 aa13.18□□□□□ -0.3
TPM1-217ENST00000559108 HTRA3P83110 453 aa13.18□□□□□ -0.3
TPM1-217ENST00000559108 NMIQ13287 307 aaPredicted RBP13.18□□□□□ -0.3
TPM1-217ENST00000559108 PICALMQ13492 652 aa13.18□□□□□ -0.3
TPM1-217ENST00000559108 CDC37L1Q7L3B6 337 aa13.18□□□□□ -0.3
TPM1-217ENST00000559108 APOBEC3FQ8IUX4 373 aaKnown RBP13.18□□□□□ -0.3
TPM1-217ENST00000559108 RILPL2Q969X0 211 aa13.18□□□□□ -0.3
TPM1-217ENST00000559108 IDI2Q9BXS1 227 aa13.18□□□□□ -0.3
TPM1-217ENST00000559108 MKRN1Q9UHC7 482 aaKnown RBP13.18□□□□□ -0.3
TPM1-217ENST00000559108 GTF3C3Q9Y5Q9 886 aa13.18□□□□□ -0.3
TPM1-217ENST00000559108 ATAD5Q96QE3 1844 aa13.18□□□□□ -0.3
TPM1-217ENST00000559108 FLT1P17948 1338 aa13.17□□□□□ -0.3
TPM1-217ENST00000559108 MAGEB6P1A0A0J9YX57 407 aa13.17□□□□□ -0.3
TPM1-217ENST00000559108 DDTLA6NHG4 134 aaPredicted RBP13.17□□□□□ -0.3
TPM1-217ENST00000559108 C1QTNF8P60827 252 aa13.17□□□□□ -0.3
TPM1-217ENST00000559108 FSTL1Q12841 308 aa13.17□□□□□ -0.3
TPM1-217ENST00000559108 ZNF589Q86UQ0 364 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms