RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 EIF4BP23588 611 aaKnown RBP4.95□□□□□ -1.62
HERC1-203ENST00000558532 DAB2P98082 770 aa4.95□□□□□ -1.62
HERC1-203ENST00000558532 FGD1P98174 961 aa4.95□□□□□ -1.62
HERC1-203ENST00000558532 PDE3AQ14432 1141 aa4.95□□□□□ -1.62
HERC1-203ENST00000558532 HP1BP3Q5SSJ5 553 aaPredicted RBP4.95□□□□□ -1.62
HERC1-203ENST00000558532 CDPF1Q6NVV7 123 aa4.95□□□□□ -1.62
HERC1-203ENST00000558532 TRIM42Q8IWZ5 723 aa4.95□□□□□ -1.62
HERC1-203ENST00000558532 FAM161BQ96MY7 647 aa4.95□□□□□ -1.62
HERC1-203ENST00000558532 GSX1Q9H4S2 264 aaPredicted RBP4.95□□□□□ -1.62
HERC1-203ENST00000558532 KRT82Q9NSB4 513 aa4.95□□□□□ -1.62
HERC1-203ENST00000558532 CACNA2D2Q9NY47 1150 aa4.95□□□□□ -1.62
HERC1-203ENST00000558532 SYNGAP1Q96PV0 1343 aa4.95□□□□□ -1.62
HERC1-203ENST00000558532 HMX2A2RU54 273 aa4.94□□□□□ -1.62
HERC1-203ENST00000558532 TMPRSS2O15393 492 aa4.94□□□□□ -1.62
HERC1-203ENST00000558532 CTSHP09668 335 aa4.94□□□□□ -1.62
HERC1-203ENST00000558532 LIG1P18858 919 aa4.94□□□□□ -1.62
HERC1-203ENST00000558532 BMP6P22004 513 aa4.94□□□□□ -1.62
HERC1-203ENST00000558532 ARNTP27540 789 aa4.94□□□□□ -1.62
HERC1-203ENST00000558532 MAP4P27816 1152 aaKnown RBP4.94□□□□□ -1.62
HERC1-203ENST00000558532 KIF4BQ2VIQ3 1234 aa4.94□□□□□ -1.62
HERC1-203ENST00000558532 AKAP4Q5JQC9 854 aa4.94□□□□□ -1.62
HERC1-203ENST00000558532 MPRIPQ6WCQ1 1025 aa4.94□□□□□ -1.62
HERC1-203ENST00000558532 BEND4Q6ZU67 534 aa4.94□□□□□ -1.62
HERC1-203ENST00000558532 TMC4Q7Z404 712 aa4.94□□□□□ -1.62
HERC1-203ENST00000558532 FAM83CQ9BQN1 747 aa4.94□□□□□ -1.62
HERC1-203ENST00000558532 CEP44Q9C0F1 390 aa4.94□□□□□ -1.62
HERC1-203ENST00000558532 STOML1Q9UBI4 398 aa4.94□□□□□ -1.62
HERC1-203ENST00000558532 PPP1R9AQ9ULJ8 1098 aa4.94□□□□□ -1.62
HERC1-203ENST00000558532 TMCO4Q5TGY1 634 aa4.93□□□□□ -1.62
HERC1-203ENST00000558532 MEI1Q5TIA1 1274 aa4.93□□□□□ -1.62
HERC1-203ENST00000558532 PCNX4Q63HM2 1172 aa4.93□□□□□ -1.62
HERC1-203ENST00000558532 CLEC10AQ8IUN9 316 aa4.93□□□□□ -1.62
HERC1-203ENST00000558532 GRIN3AQ8TCU5 1115 aa4.93□□□□□ -1.62
HERC1-203ENST00000558532 FBLIM1Q8WUP2 373 aa4.93□□□□□ -1.62
HERC1-203ENST00000558532 EZH1Q92800 747 aaPredicted RBP4.93□□□□□ -1.62
HERC1-203ENST00000558532 KCNF1Q9H3M0 494 aa4.93□□□□□ -1.62
HERC1-203ENST00000558532 RAD18Q9NS91 495 aa4.93□□□□□ -1.62
HERC1-203ENST00000558532 FAM105AQ9NUU6 356 aa4.93□□□□□ -1.62
HERC1-203ENST00000558532 TTF2Q9UNY4 1162 aaKnown RBP4.93□□□□□ -1.62
HERC1-203ENST00000558532 AP4E1Q9UPM8 1137 aa4.93□□□□□ -1.62
HERC1-203ENST00000558532 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
HERC1-203ENST00000558532 IGLV1-40P01703 118 aa4.92□□□□□ -1.62
HERC1-203ENST00000558532 NFIAQ12857 509 aa4.92□□□□□ -1.62
HERC1-203ENST00000558532 PSMD2Q13200 908 aa4.92□□□□□ -1.62
HERC1-203ENST00000558532 MAP1SQ66K74 1059 aaPredicted RBP4.92□□□□□ -1.62
HERC1-203ENST00000558532 RNF43Q68DV7 783 aa4.92□□□□□ -1.62
HERC1-203ENST00000558532 GPBAR1Q8TDU6 330 aa4.92□□□□□ -1.62
HERC1-203ENST00000558532 KCNB2Q92953 911 aa4.92□□□□□ -1.62
HERC1-203ENST00000558532 KRTAP4-6Q9BYQ5 205 aa4.92□□□□□ -1.62
HERC1-203ENST00000558532 ACSS3Q9H6R3 686 aa4.92□□□□□ -1.62
HERC1-203ENST00000558532 CRIM1Q9NZV1 1036 aa4.92□□□□□ -1.62
HERC1-203ENST00000558532 GSC2O15499 205 aa4.91□□□□□ -1.62
HERC1-203ENST00000558532 RAB6AP20340 208 aa4.91□□□□□ -1.62
HERC1-203ENST00000558532 XPCQ01831 940 aaPredicted RBP4.91□□□□□ -1.62
HERC1-203ENST00000558532 ID3Q02535 119 aa4.91□□□□□ -1.62
HERC1-203ENST00000558532 ZMYM1Q5SVZ6 1142 aa4.91□□□□□ -1.62
HERC1-203ENST00000558532 SV2BQ7L1I2 683 aa4.91□□□□□ -1.62
HERC1-203ENST00000558532 DYMQ7RTS9 669 aa4.91□□□□□ -1.62
HERC1-203ENST00000558532 ZDHHC13Q8IUH4 622 aa4.91□□□□□ -1.62
HERC1-203ENST00000558532 SHISA5Q8N114 240 aa4.91□□□□□ -1.62
HERC1-203ENST00000558532 FANCD2OSQ96PS1 177 aa4.91□□□□□ -1.62
HERC1-203ENST00000558532 DBNDD2Q9BQY9 259 aa4.91□□□□□ -1.62
HERC1-203ENST00000558532 BCL2L13Q9BXK5 485 aa4.91□□□□□ -1.62
HERC1-203ENST00000558532 EMILIN2Q9BXX0 1053 aa4.91□□□□□ -1.62
HERC1-203ENST00000558532 SEMA6CQ9H3T2 930 aa4.91□□□□□ -1.62
HERC1-203ENST00000558532 CBX8Q9HC52 389 aa4.91□□□□□ -1.62
HERC1-203ENST00000558532 SHROOM4Q9ULL8 1493 aa4.91□□□□□ -1.62
HERC1-203ENST00000558532 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.9□□□□□ -1.63
HERC1-203ENST00000558532 FAM95CA0A1B0GW59 222 aa4.9□□□□□ -1.63
HERC1-203ENST00000558532 TRIM37O94972 964 aa4.9□□□□□ -1.63
HERC1-203ENST00000558532 NFICP08651 508 aa4.9□□□□□ -1.63
HERC1-203ENST00000558532 RXRBP28702 533 aa4.9□□□□□ -1.63
HERC1-203ENST00000558532 ASPAP45381 313 aa4.9□□□□□ -1.63
HERC1-203ENST00000558532 USP11P51784 963 aa4.9□□□□□ -1.63
HERC1-203ENST00000558532 MFAP1P55081 439 aaKnown RBP4.9□□□□□ -1.63
HERC1-203ENST00000558532 CCDC85BQ15834 202 aaPredicted RBP4.9□□□□□ -1.63
HERC1-203ENST00000558532 LLGL2Q6P1M3 1020 aa4.9□□□□□ -1.63
HERC1-203ENST00000558532 SEZ6L2Q6UXD5 910 aa4.9□□□□□ -1.63
HERC1-203ENST00000558532 SLC51AQ86UW1 340 aa4.9□□□□□ -1.63
HERC1-203ENST00000558532 GIPC2Q8TF65 315 aa4.9□□□□□ -1.63
HERC1-203ENST00000558532 GATA6Q92908 595 aa4.9□□□□□ -1.63
HERC1-203ENST00000558532 GAL3ST3Q96A11 431 aa4.9□□□□□ -1.63
HERC1-203ENST00000558532 CRELD1Q96HD1 420 aa4.9□□□□□ -1.63
HERC1-203ENST00000558532 MFSD14AQ96MC6 490 aa4.9□□□□□ -1.63
HERC1-203ENST00000558532 DISC1Q9NRI5 854 aa4.9□□□□□ -1.63
HERC1-203ENST00000558532 RNF112Q9ULX5 631 aa4.9□□□□□ -1.63
HERC1-203ENST00000558532 DYNC1LI2O43237 492 aaPredicted RBP4.89□□□□□ -1.63
HERC1-203ENST00000558532 SORBS3O60504 671 aa4.89□□□□□ -1.63
HERC1-203ENST00000558532 TGFB1P01137 390 aa4.89□□□□□ -1.63
HERC1-203ENST00000558532 NEFMP07197 916 aa4.89□□□□□ -1.63
HERC1-203ENST00000558532 SLFN14P0C7P3 912 aa4.89□□□□□ -1.63
HERC1-203ENST00000558532 ADMP35318 185 aa4.89□□□□□ -1.63
HERC1-203ENST00000558532 ST13P50502 369 aaKnown RBP4.89□□□□□ -1.63
HERC1-203ENST00000558532 PTPN11Q06124 597 aaPredicted RBP4.89□□□□□ -1.63
HERC1-203ENST00000558532 ZC3H12AQ5D1E8 599 aaKnown RBP4.89□□□□□ -1.63
HERC1-203ENST00000558532 TTBK2Q6IQ55 1244 aa4.89□□□□□ -1.63
HERC1-203ENST00000558532 SHKBP1Q8TBC3 707 aa4.89□□□□□ -1.63
HERC1-203ENST00000558532 ATXN3LQ9H3M9 355 aa4.89□□□□□ -1.63
HERC1-203ENST00000558532 PRKAG2Q9UGJ0 569 aa4.89□□□□□ -1.63
HERC1-203ENST00000558532 CYP8B1Q9UNU6 501 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms