RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 PNMA6AP0CW24 399 aaPredicted RBP13.13□□□□□ -0.31
SRP54-213ENST00000556994 TOP1P11387 765 aaKnown RBP13.13□□□□□ -0.31
SRP54-213ENST00000556994 KCNJ6P48051 423 aa13.13□□□□□ -0.31
SRP54-213ENST00000556994 PDE4BQ07343 736 aa13.13□□□□□ -0.31
SRP54-213ENST00000556994 PTPAQ15257 358 aa13.13□□□□□ -0.31
SRP54-213ENST00000556994 METTL16Q86W50 562 aaKnown RBP13.13□□□□□ -0.31
SRP54-213ENST00000556994 PROSER2Q86WR7 435 aaPredicted RBP13.13□□□□□ -0.31
SRP54-213ENST00000556994 TBC1D10CQ8IV04 446 aa13.13□□□□□ -0.31
SRP54-213ENST00000556994 FAM89AQ96GI7 184 aa13.13□□□□□ -0.31
SRP54-213ENST00000556994 HPSEQ9Y251 543 aa13.13□□□□□ -0.31
SRP54-213ENST00000556994 TRDNQ13061 729 aa13.13□□□□□ -0.31
SRP54-213ENST00000556994 LRRFIP1Q32MZ4 808 aaKnown RBP13.13□□□□□ -0.31
SRP54-213ENST00000556994 TAF7LQ5H9L4 462 aa13.13□□□□□ -0.31
SRP54-213ENST00000556994 VSTM4Q8IW00 320 aa13.13□□□□□ -0.31
SRP54-213ENST00000556994 SYNE4Q8N205 404 aa13.13□□□□□ -0.31
SRP54-213ENST00000556994 PDILTQ8N807 584 aa13.13□□□□□ -0.31
SRP54-213ENST00000556994 MNS1Q8NEH6 495 aa13.13□□□□□ -0.31
SRP54-213ENST00000556994 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.13□□□□□ -0.31
SRP54-213ENST00000556994 NOL10Q9BSC4 688 aaKnown RBP13.13□□□□□ -0.31
SRP54-213ENST00000556994 PCDHA5Q9Y5H7 936 aa13.13□□□□□ -0.31
SRP54-213ENST00000556994 TRPM3Q9HCF6 1732 aaPredicted RBP13.12□□□□□ -0.31
SRP54-213ENST00000556994 B4E1Z4 1266 aa13.12□□□□□ -0.31
SRP54-213ENST00000556994 ZFYP08048 801 aaPredicted RBP13.12□□□□□ -0.31
SRP54-213ENST00000556994 BMP6P22004 513 aa13.12□□□□□ -0.31
SRP54-213ENST00000556994 PLA2G4AP47712 749 aa13.12□□□□□ -0.31
SRP54-213ENST00000556994 OLFM4Q6UX06 510 aa13.12□□□□□ -0.31
SRP54-213ENST00000556994 CNNM3Q8NE01 707 aa13.12□□□□□ -0.31
SRP54-213ENST00000556994 TIGD1Q96MW7 591 aa13.12□□□□□ -0.31
SRP54-213ENST00000556994 MAP3K14Q99558 947 aa13.12□□□□□ -0.31
SRP54-213ENST00000556994 ANGEL1Q9UNK9 670 aaKnown RBP13.12□□□□□ -0.31
SRP54-213ENST00000556994 ZMYM6O95789 1325 aa13.12□□□□□ -0.31
SRP54-213ENST00000556994 PHLPP2Q6ZVD8 1323 aa13.12□□□□□ -0.31
SRP54-213ENST00000556994 ZBTB22O15209 634 aa13.12□□□□□ -0.31
SRP54-213ENST00000556994 CBFA2T2O43439 604 aa13.12□□□□□ -0.31
SRP54-213ENST00000556994 INTS13Q9NVM9 706 aa13.12□□□□□ -0.31
SRP54-213ENST00000556994 AKAP2Q9Y2D5 859 aa13.12□□□□□ -0.31
SRP54-213ENST00000556994 VWA3AA6NCI4 1184 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 PPP6R2O75170 966 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 MCAMP43121 646 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 ADKP55263 362 aaKnown RBP13.11□□□□□ -0.31
SRP54-213ENST00000556994 SLC9C2Q5TAH2 1124 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 RESP18Q5W5W9 173 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 TICAM2Q86XR7 235 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 ATG3Q9NT62 314 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 PPP2R2CQ9Y2T4 447 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 PARP3Q9Y6F1 533 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 CPDO75976 1380 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 POLR3GO15318 223 aaPredicted RBP13.11□□□□□ -0.31
SRP54-213ENST00000556994 RANBP6O60518 1105 aaKnown RBP13.11□□□□□ -0.31
SRP54-213ENST00000556994 GRIN1Q05586 938 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 ZNF827Q17R98 1081 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 CCDC102BQ68D86 513 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 APOA5Q6Q788 366 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 TMCO3Q6UWJ1 677 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 NFXL1Q6ZNB6 911 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 KRBA2Q6ZNG9 492 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 TMEM139Q8IV31 216 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 JMYQ8N9B5 988 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 WDR24Q96S15 920 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 KCNH3Q9ULD8 1083 aa13.11□□□□□ -0.31
SRP54-213ENST00000556994 TJP1Q07157 1748 aa13.1□□□□□ -0.31
SRP54-213ENST00000556994 SH2B2O14492 632 aaPredicted RBP13.1□□□□□ -0.31
SRP54-213ENST00000556994 TADA3O75528 432 aa13.1□□□□□ -0.31
SRP54-213ENST00000556994 IDH1O75874 414 aaKnown RBP13.1□□□□□ -0.31
SRP54-213ENST00000556994 C4AP0C0L4 1744 aa13.1□□□□□ -0.31
SRP54-213ENST00000556994 C4BP0C0L5 1744 aa13.1□□□□□ -0.31
SRP54-213ENST00000556994 CCP110O43303 1012 aa13.1□□□□□ -0.31
SRP54-213ENST00000556994 ZRANB2O95218 330 aaKnown RBP eCLIP13.1□□□□□ -0.31
SRP54-213ENST00000556994 TUBB4AP04350 444 aa13.1□□□□□ -0.31
SRP54-213ENST00000556994 IARSP41252 1262 aaKnown RBP13.1□□□□□ -0.31
SRP54-213ENST00000556994 GNG11P61952 73 aa13.1□□□□□ -0.31
SRP54-213ENST00000556994 DHX8Q14562 1220 aaKnown RBP13.1□□□□□ -0.31
SRP54-213ENST00000556994 TOGARAM2Q6ZUX3 1019 aa13.1□□□□□ -0.31
SRP54-213ENST00000556994 TRMT44Q8IYL2 757 aaKnown RBP13.1□□□□□ -0.31
SRP54-213ENST00000556994 GRAMD1CQ8IYS0 662 aa13.1□□□□□ -0.31
SRP54-213ENST00000556994 CCDC82Q8N4S0 544 aa13.1□□□□□ -0.31
SRP54-213ENST00000556994 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.1□□□□□ -0.31
SRP54-213ENST00000556994 SLC26A6Q9BXS9 759 aa13.1□□□□□ -0.31
SRP54-213ENST00000556994 TMEM94Q12767 1356 aa13.09□□□□□ -0.31
SRP54-213ENST00000556994 C1orf167Q5SNV9 1468 aa13.09□□□□□ -0.31
SRP54-213ENST00000556994 GLI3P10071 1580 aa13.09□□□□□ -0.31
SRP54-213ENST00000556994 CDK11BP21127 795 aaKnown RBP13.09□□□□□ -0.31
SRP54-213ENST00000556994 TRIM29Q14134 588 aa13.09□□□□□ -0.31
SRP54-213ENST00000556994 METTL24Q5JXM2 366 aa13.09□□□□□ -0.31
SRP54-213ENST00000556994 TAF3Q5VWG9 929 aa13.09□□□□□ -0.31
SRP54-213ENST00000556994 BAG1Q99933 345 aaPredicted RBP13.09□□□□□ -0.31
SRP54-213ENST00000556994 C19orf44Q9H6X5 657 aa13.09□□□□□ -0.31
SRP54-213ENST00000556994 KIF1AQ12756 1690 aa13.09□□□□□ -0.31
SRP54-213ENST00000556994 GOLGA8AA7E2F4 631 aa13.08□□□□□ -0.31
SRP54-213ENST00000556994 ZBTB43O43298 467 aa13.08□□□□□ -0.31
SRP54-213ENST00000556994 ZSCAN12O43309 604 aa13.08□□□□□ -0.31
SRP54-213ENST00000556994 PRR29P0C7W0 189 aa13.08□□□□□ -0.31
SRP54-213ENST00000556994 GUCY1A2P33402 732 aa13.08□□□□□ -0.31
SRP54-213ENST00000556994 ADD2P35612 726 aa13.08□□□□□ -0.31
SRP54-213ENST00000556994 FMR1Q06787 632 aaKnown RBP eCLIP13.08□□□□□ -0.312e-7■□□□□ 8.6
SRP54-213ENST00000556994 IFIT5Q13325 482 aaKnown RBP13.08□□□□□ -0.31
SRP54-213ENST00000556994 NTRK3Q16288 839 aa13.08□□□□□ -0.31
SRP54-213ENST00000556994 DESI2Q9BSY9 194 aa13.08□□□□□ -0.31
SRP54-213ENST00000556994 ZCCHC17Q9NP64 241 aaKnown RBP13.08□□□□□ -0.31
SRP54-213ENST00000556994 PIH1D3Q9NQM4 214 aaKnown RBP13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms