RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ADGRA1Q86SQ6 560 aa21.25■□□□□ 0.99
SHMT2-225ENST00000556798 MAGEB6Q8N7X4 407 aa21.25■□□□□ 0.99
SHMT2-225ENST00000556798 ZNF408Q9H9D4 720 aa21.25■□□□□ 0.99
SHMT2-225ENST00000556798 TCP10L2B9ZVM9 353 aa21.24■□□□□ 0.99
SHMT2-225ENST00000556798 ERC2O15083 957 aa21.24■□□□□ 0.99
SHMT2-225ENST00000556798 MAP3K12Q12852 859 aa21.24■□□□□ 0.99
SHMT2-225ENST00000556798 CDC42EP5Q6NZY7 148 aa21.24■□□□□ 0.99
SHMT2-225ENST00000556798 CDCA5Q96FF9 252 aa21.24■□□□□ 0.99
SHMT2-225ENST00000556798 FAM163AQ96GL9 167 aaPredicted RBP21.24■□□□□ 0.99
SHMT2-225ENST00000556798 GLRX3O76003 335 aaKnown RBP21.23■□□□□ 0.99
SHMT2-225ENST00000556798 LDHCP07864 332 aa21.23■□□□□ 0.99
SHMT2-225ENST00000556798 CYP7A1P22680 504 aa21.23■□□□□ 0.99
SHMT2-225ENST00000556798 USP40Q9NVE5 1235 aa21.23■□□□□ 0.99
SHMT2-225ENST00000556798 TMOD2Q9NZR1 351 aa21.23■□□□□ 0.99
SHMT2-225ENST00000556798 STAP2Q9UGK3 403 aa21.23■□□□□ 0.99
SHMT2-225ENST00000556798 GPR75-ASB3A0A0A6YYF3 556 aa21.22■□□□□ 0.99
SHMT2-225ENST00000556798 HSPA6P17066 643 aa21.22■□□□□ 0.99
SHMT2-225ENST00000556798 PDE4AP27815 886 aa21.22■□□□□ 0.99
SHMT2-225ENST00000556798 APLP1P51693 650 aa21.22■□□□□ 0.99
SHMT2-225ENST00000556798 CCDC136Q96JN2 1154 aa21.22■□□□□ 0.99
SHMT2-225ENST00000556798 DEFB129Q9H1M3 183 aa21.22■□□□□ 0.99
SHMT2-225ENST00000556798 AATFQ9NY61 560 aaKnown RBP eCLIP21.22■□□□□ 0.99
SHMT2-225ENST00000556798 CELF2O95319 508 aaKnown RBP21.21■□□□□ 0.99
SHMT2-225ENST00000556798 CHGBP05060 677 aa21.21■□□□□ 0.99
SHMT2-225ENST00000556798 PDE6AP16499 860 aa21.21■□□□□ 0.99
SHMT2-225ENST00000556798 HTRA3P83110 453 aa21.21■□□□□ 0.99
SHMT2-225ENST00000556798 NFIAQ12857 509 aa21.21■□□□□ 0.99
SHMT2-225ENST00000556798 RASA3Q14644 834 aa21.21■□□□□ 0.99
SHMT2-225ENST00000556798 SLFNL1Q499Z3 407 aa21.21■□□□□ 0.99
SHMT2-225ENST00000556798 SLC9C2Q5TAH2 1124 aa21.21■□□□□ 0.99
SHMT2-225ENST00000556798 PLEKHM2Q8IWE5 1019 aa21.21■□□□□ 0.99
SHMT2-225ENST00000556798 CNTNAP1P78357 1384 aa21.21■□□□□ 0.99
SHMT2-225ENST00000556798 TNFAIP1Q13829 316 aa21.2■□□□□ 0.98
SHMT2-225ENST00000556798 CST9Q5W186 159 aa21.2■□□□□ 0.98
SHMT2-225ENST00000556798 MIGA1Q8NAN2 632 aa21.2■□□□□ 0.98
SHMT2-225ENST00000556798 NOL10Q9BSC4 688 aaKnown RBP21.2■□□□□ 0.98
SHMT2-225ENST00000556798 ZNF532Q9HCE3 1301 aa21.2■□□□□ 0.98
SHMT2-225ENST00000556798 RFX7Q2KHR2 1363 aa21.2■□□□□ 0.98
SHMT2-225ENST00000556798 IGSF3O75054 1194 aa21.19■□□□□ 0.98
SHMT2-225ENST00000556798 RHBDL3P58872 404 aa21.19■□□□□ 0.98
SHMT2-225ENST00000556798 CENPQQ7L2Z9 268 aaPredicted RBP21.19■□□□□ 0.98
SHMT2-225ENST00000556798 CDAN1Q8IWY9 1227 aa21.19■□□□□ 0.98
SHMT2-225ENST00000556798 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.19■□□□□ 0.98
SHMT2-225ENST00000556798 TMEM39BQ9GZU3 492 aa21.19■□□□□ 0.98
SHMT2-225ENST00000556798 NAV1Q8NEY1 1877 aa21.19■□□□□ 0.98
SHMT2-225ENST00000556798 SSC5DA1L4H1 1573 aa21.19■□□□□ 0.98
SHMT2-225ENST00000556798 PAPPA2Q9BXP8 1791 aa21.18■□□□□ 0.98
SHMT2-225ENST00000556798 MYH1P12882 1939 aa21.18■□□□□ 0.98
SHMT2-225ENST00000556798 TMEM88BA6NKF7 163 aa21.18■□□□□ 0.98
SHMT2-225ENST00000556798 TNNI2P48788 182 aa21.18■□□□□ 0.98
SHMT2-225ENST00000556798 DYNLL1P63167 89 aaKnown RBP21.18■□□□□ 0.98
SHMT2-225ENST00000556798 TCP10Q12799 353 aa21.18■□□□□ 0.98
SHMT2-225ENST00000556798 KBTBD3Q8NAB2 608 aa21.18■□□□□ 0.98
SHMT2-225ENST00000556798 SH3RF3Q8TEJ3 882 aaPredicted RBP21.18■□□□□ 0.98
SHMT2-225ENST00000556798 FAM198AQ9UFP1 575 aa21.18■□□□□ 0.98
SHMT2-225ENST00000556798 PPP2R3BQ9Y5P8 575 aa21.18■□□□□ 0.98
SHMT2-225ENST00000556798 OTOFQ9HC10 1997 aa21.17■□□□□ 0.98
SHMT2-225ENST00000556798 TCRBV5S4A2TA0A5A2 114 aa21.17■□□□□ 0.98
SHMT2-225ENST00000556798 WDHD1O75717 1129 aaPredicted RBP21.17■□□□□ 0.98
SHMT2-225ENST00000556798 ADD2P35612 726 aa21.17■□□□□ 0.98
SHMT2-225ENST00000556798 PICALMQ13492 652 aa21.17■□□□□ 0.98
SHMT2-225ENST00000556798 FKBP1CQ5VVH2 108 aa21.17■□□□□ 0.98
SHMT2-225ENST00000556798 BAG3O95817 575 aa21.16■□□□□ 0.98
SHMT2-225ENST00000556798 RGS3P49796 1198 aa21.16■□□□□ 0.98
SHMT2-225ENST00000556798 NBPF12Q5TAG4 269 aaPredicted RBP21.16■□□□□ 0.98
SHMT2-225ENST00000556798 FAM83AQ86UY5 434 aa21.16■□□□□ 0.98
SHMT2-225ENST00000556798 TEX11Q8IYF3 940 aa21.16■□□□□ 0.98
SHMT2-225ENST00000556798 TEPSINQ96N21 525 aa21.16■□□□□ 0.98
SHMT2-225ENST00000556798 FSD1Q9BTV5 496 aa21.16■□□□□ 0.98
SHMT2-225ENST00000556798 OSBPL3Q9H4L5 887 aa21.16■□□□□ 0.98
SHMT2-225ENST00000556798 DDX4Q9NQI0 724 aaKnown RBP21.16■□□□□ 0.98
SHMT2-225ENST00000556798 PPP4CP60510 307 aa21.15■□□□□ 0.98
SHMT2-225ENST00000556798 SKAP1Q86WV1 359 aa21.15■□□□□ 0.98
SHMT2-225ENST00000556798 ZFPM1Q8IX07 1006 aa21.15■□□□□ 0.98
SHMT2-225ENST00000556798 IDI2Q9BXS1 227 aa21.15■□□□□ 0.98
SHMT2-225ENST00000556798 CREBZFQ9NS37 354 aa21.15■□□□□ 0.98
SHMT2-225ENST00000556798 FZD1Q9UP38 647 aa21.15■□□□□ 0.98
SHMT2-225ENST00000556798 BAZ2AQ9UIF9 1905 aaKnown RBP21.15■□□□□ 0.98
SHMT2-225ENST00000556798 RPAP1Q9BWH6 1393 aaPredicted RBP21.14■□□□□ 0.98
SHMT2-225ENST00000556798 SIPA1L1O43166 1804 aa21.14■□□□□ 0.97
SHMT2-225ENST00000556798 MAGEB6P1A0A0J9YX57 407 aa21.14■□□□□ 0.97
SHMT2-225ENST00000556798 PLCG2P16885 1265 aa21.14■□□□□ 0.97
SHMT2-225ENST00000556798 PRKG1Q13976 671 aa21.14■□□□□ 0.97
SHMT2-225ENST00000556798 ERICH6BQ5W0A0 696 aa21.14■□□□□ 0.97
SHMT2-225ENST00000556798 TMED8Q6PL24 325 aaPredicted RBP21.14■□□□□ 0.97
SHMT2-225ENST00000556798 MOB2Q70IA6 237 aa21.14■□□□□ 0.97
SHMT2-225ENST00000556798 FAM151AQ8WW52 585 aa21.14■□□□□ 0.97
SHMT2-225ENST00000556798 GBA2Q9HCG7 927 aaPredicted RBP21.14■□□□□ 0.97
SHMT2-225ENST00000556798 ABT1Q9ULW3 272 aaKnown RBP21.14■□□□□ 0.97
SHMT2-225ENST00000556798 DDX60LQ5H9U9 1706 aaKnown RBP21.14■□□□□ 0.97
SHMT2-225ENST00000556798 NF2P35240 595 aa21.13■□□□□ 0.97
SHMT2-225ENST00000556798 UBE3CQ15386 1083 aa21.13■□□□□ 0.97
SHMT2-225ENST00000556798 ZSCAN25Q6NSZ9 544 aa21.13■□□□□ 0.97
SHMT2-225ENST00000556798 RIOK1Q9BRS2 568 aaKnown RBP21.13■□□□□ 0.97
SHMT2-225ENST00000556798 PPP4R2Q9NY27 417 aa21.13■□□□□ 0.97
SHMT2-225ENST00000556798 TRIM6-TRIM34B2RNG4 842 aa21.12■□□□□ 0.97
SHMT2-225ENST00000556798 RNF113AO15541 343 aaKnown RBP21.12■□□□□ 0.97
SHMT2-225ENST00000556798 TTLL12Q14166 644 aaPredicted RBP21.12■□□□□ 0.97
SHMT2-225ENST00000556798 LCORLQ8N3X6 602 aa21.12■□□□□ 0.97
SHMT2-225ENST00000556798 TGFBRAP1Q8WUH2 860 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms