RNA–Protein interactions for RNA: ENST00000556618.1

RCCD1-206, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RCCD1, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-206ENST00000556618 ADD2P35612 726 aa29.12■■■□□ 2.25
RCCD1-206ENST00000556618 BTDP43251 543 aa29.12■■■□□ 2.25
RCCD1-206ENST00000556618 ZSCAN25Q6NSZ9 544 aa29.12■■■□□ 2.25
RCCD1-206ENST00000556618 DCPSQ96C86 337 aaKnown RBP29.12■■■□□ 2.25
RCCD1-206ENST00000556618 ZNF532Q9HCE3 1301 aa29.12■■■□□ 2.25
RCCD1-206ENST00000556618 CLRN2A0PK11 232 aa29.11■■■□□ 2.25
RCCD1-206ENST00000556618 MAP1SQ66K74 1059 aaPredicted RBP29.11■■■□□ 2.25
RCCD1-206ENST00000556618 CDC42EP5Q6NZY7 148 aa29.11■■■□□ 2.25
RCCD1-206ENST00000556618 FSD1Q9BTV5 496 aa29.11■■■□□ 2.25
RCCD1-206ENST00000556618 PITPNM2Q9BZ72 1349 aa29.11■■■□□ 2.25
RCCD1-206ENST00000556618 CHGBP05060 677 aa29.1■■■□□ 2.25
RCCD1-206ENST00000556618 SLFNL1Q499Z3 407 aa29.1■■■□□ 2.25
RCCD1-206ENST00000556618 CNTROBQ8N137 903 aa29.1■■■□□ 2.25
RCCD1-206ENST00000556618 RILPL2Q969X0 211 aa29.1■■■□□ 2.25
RCCD1-206ENST00000556618 USP40Q9NVE5 1235 aa29.1■■■□□ 2.25
RCCD1-206ENST00000556618 GSPT1P15170 499 aaKnown RBP29.09■■■□□ 2.25
RCCD1-206ENST00000556618 RGS3P49796 1198 aa29.09■■■□□ 2.25
RCCD1-206ENST00000556618 UBE3CQ15386 1083 aa29.09■■■□□ 2.25
RCCD1-206ENST00000556618 RNF113AO15541 343 aaKnown RBP29.09■■■□□ 2.25
RCCD1-206ENST00000556618 PPP4CP60510 307 aa29.09■■■□□ 2.25
RCCD1-206ENST00000556618 LRRFIP1Q32MZ4 808 aaKnown RBP29.09■■■□□ 2.25
RCCD1-206ENST00000556618 SMC1BQ8NDV3 1235 aa29.09■■■□□ 2.25
RCCD1-206ENST00000556618 NOL10Q9BSC4 688 aaKnown RBP29.09■■■□□ 2.25
RCCD1-206ENST00000556618 AATFQ9NY61 560 aaKnown RBP eCLIP29.09■■■□□ 2.25
RCCD1-206ENST00000556618 BAG3O95817 575 aa29.08■■■□□ 2.25
RCCD1-206ENST00000556618 ZFYP08048 801 aaPredicted RBP29.08■■■□□ 2.25
RCCD1-206ENST00000556618 RHBDL3P58872 404 aa29.08■■■□□ 2.25
RCCD1-206ENST00000556618 VEZTQ9HBM0 779 aa29.08■■■□□ 2.25
RCCD1-206ENST00000556618 CDC37L1Q7L3B6 337 aa29.07■■■□□ 2.24
RCCD1-206ENST00000556618 APOBEC3FQ8IUX4 373 aaKnown RBP29.07■■■□□ 2.24
RCCD1-206ENST00000556618 MIGA1Q8NAN2 632 aa29.07■■■□□ 2.24
RCCD1-206ENST00000556618 SCAF8Q9UPN6 1271 aaKnown RBP29.07■■■□□ 2.24
RCCD1-206ENST00000556618 GTF3C3Q9Y5Q9 886 aa29.07■■■□□ 2.24
RCCD1-206ENST00000556618 CACNB3P54284 484 aa29.06■■■□□ 2.24
RCCD1-206ENST00000556618 KRT26Q7Z3Y9 468 aa29.06■■■□□ 2.24
RCCD1-206ENST00000556618 SULF1Q8IWU6 871 aa29.06■■■□□ 2.24
RCCD1-206ENST00000556618 GLIS2Q9BZE0 524 aaPredicted RBP29.06■■■□□ 2.24
RCCD1-206ENST00000556618 TMOD2Q9NZR1 351 aa29.06■■■□□ 2.24
RCCD1-206ENST00000556618 CDK5RAP2Q96SN8 1893 aa29.06■■■□□ 2.24
RCCD1-206ENST00000556618 DYNLL1P63167 89 aaKnown RBP29.05■■■□□ 2.24
RCCD1-206ENST00000556618 USP48Q86UV5 1035 aa29.05■■■□□ 2.24
RCCD1-206ENST00000556618 TICAM2Q86XR7 235 aa29.05■■■□□ 2.24
RCCD1-206ENST00000556618 SDSP20132 328 aa29.05■■■□□ 2.24
RCCD1-206ENST00000556618 FKBP1CQ5VVH2 108 aa29.05■■■□□ 2.24
RCCD1-206ENST00000556618 SH3RF3Q8TEJ3 882 aaPredicted RBP29.05■■■□□ 2.24
RCCD1-206ENST00000556618 MAGEB6P1A0A0J9YX57 407 aa29.04■■■□□ 2.24
RCCD1-206ENST00000556618 TCP10L2B9ZVM9 353 aa29.04■■■□□ 2.24
RCCD1-206ENST00000556618 ITGBL1O95965 494 aaPredicted RBP29.04■■■□□ 2.24
RCCD1-206ENST00000556618 PLCG2P16885 1265 aa29.04■■■□□ 2.24
RCCD1-206ENST00000556618 FSTL1Q12841 308 aa29.04■■■□□ 2.24
RCCD1-206ENST00000556618 RIOK1Q9BRS2 568 aaKnown RBP29.04■■■□□ 2.24
RCCD1-206ENST00000556618 ADM5C9JUS6 153 aa29.03■■■□□ 2.24
RCCD1-206ENST00000556618 TNFAIP1Q13829 316 aa29.02■■■□□ 2.24
RCCD1-206ENST00000556618 CERS3Q8IU89 383 aa29.02■■■□□ 2.24
RCCD1-206ENST00000556618 APPBP2Q92624 585 aa29.02■■■□□ 2.24
RCCD1-206ENST00000556618 IDI2Q9BXS1 227 aa29.02■■■□□ 2.24
RCCD1-206ENST00000556618 PUS7LQ9H0K6 701 aaKnown RBP29.02■■■□□ 2.24
RCCD1-206ENST00000556618 DEFB129Q9H1M3 183 aa29.02■■■□□ 2.24
RCCD1-206ENST00000556618 RFX7Q2KHR2 1363 aa29.02■■■□□ 2.24
RCCD1-206ENST00000556618 WDHD1O75717 1129 aaPredicted RBP29.01■■■□□ 2.24
RCCD1-206ENST00000556618 NFIAQ12857 509 aa29.01■■■□□ 2.24
RCCD1-206ENST00000556618 DLK2Q6UY11 383 aa29.01■■■□□ 2.24
RCCD1-206ENST00000556618 TEX11Q8IYF3 940 aa29.01■■■□□ 2.24
RCCD1-206ENST00000556618 OSBP2Q969R2 916 aa29.01■■■□□ 2.24
RCCD1-206ENST00000556618 FOCADQ5VW36 1801 aa29.01■■■□□ 2.24
RCCD1-206ENST00000556618 RASA3Q14644 834 aa29.01■■■□□ 2.23
RCCD1-206ENST00000556618 ZMYM1Q5SVZ6 1142 aa29.01■■■□□ 2.23
RCCD1-206ENST00000556618 FAM198AQ9UFP1 575 aa29.01■■■□□ 2.23
RCCD1-206ENST00000556618 CNTNAP1P78357 1384 aa29■■■□□ 2.23
RCCD1-206ENST00000556618 TRAF5O00463 557 aa29■■■□□ 2.23
RCCD1-206ENST00000556618 TNNI2P48788 182 aa29■■■□□ 2.23
RCCD1-206ENST00000556618 FAM83AQ86UY5 434 aa29■■■□□ 2.23
RCCD1-206ENST00000556618 MBD4O95243 580 aa28.99■■■□□ 2.23
RCCD1-206ENST00000556618 BMP2KLQ5H9B9 411 aa28.99■■■□□ 2.23
RCCD1-206ENST00000556618 LCORLQ8N3X6 602 aa28.99■■■□□ 2.23
RCCD1-206ENST00000556618 ARMT1Q9H993 441 aa28.99■■■□□ 2.23
RCCD1-206ENST00000556618 DDX4Q9NQI0 724 aaKnown RBP28.99■■■□□ 2.23
RCCD1-206ENST00000556618 PPP2R3BQ9Y5P8 575 aa28.99■■■□□ 2.23
RCCD1-206ENST00000556618 TRPM7Q96QT4 1865 aa28.99■■■□□ 2.23
RCCD1-206ENST00000556618 FMR1Q06787 632 aaKnown RBP eCLIP28.98■■■□□ 2.23
RCCD1-206ENST00000556618 AIDAQ96BJ3 306 aa28.98■■■□□ 2.23
RCCD1-206ENST00000556618 NPM3O75607 178 aaKnown RBP28.97■■■□□ 2.23
RCCD1-206ENST00000556618 TCP10Q12799 353 aa28.97■■■□□ 2.23
RCCD1-206ENST00000556618 PRAMEF18Q5VWM3 479 aa28.97■■■□□ 2.23
RCCD1-206ENST00000556618 FAM151AQ8WW52 585 aa28.97■■■□□ 2.23
RCCD1-206ENST00000556618 SEC62Q99442 399 aaKnown RBP28.97■■■□□ 2.23
RCCD1-206ENST00000556618 PASKQ96RG2 1323 aa28.97■■■□□ 2.23
RCCD1-206ENST00000556618 ENTPD3O75355 529 aa28.96■■■□□ 2.23
RCCD1-206ENST00000556618 PICALMQ13492 652 aa28.96■■■□□ 2.23
RCCD1-206ENST00000556618 TGFBRAP1Q8WUH2 860 aa28.96■■■□□ 2.23
RCCD1-206ENST00000556618 TMEM39BQ9GZU3 492 aa28.96■■■□□ 2.23
RCCD1-206ENST00000556618 M0R2C6 588 aa28.96■■■□□ 2.23
RCCD1-206ENST00000556618 ZFPM1Q8IX07 1006 aa28.96■■■□□ 2.23
RCCD1-206ENST00000556618 CDCA5Q96FF9 252 aa28.96■■■□□ 2.23
RCCD1-206ENST00000556618 FAM227BQ96M60 508 aa28.96■■■□□ 2.23
RCCD1-206ENST00000556618 CRNKL1Q9BZJ0 848 aaKnown RBP28.96■■■□□ 2.23
RCCD1-206ENST00000556618 HIP1O00291 1037 aa28.95■■■□□ 2.22
RCCD1-206ENST00000556618 NMIQ13287 307 aaPredicted RBP28.95■■■□□ 2.22
RCCD1-206ENST00000556618 TEPSINQ96N21 525 aa28.95■■■□□ 2.22
RCCD1-206ENST00000556618 STRBPQ96SI9 672 aaKnown RBP28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms