RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 ZNF213O14771 459 aa10.98□□□□□ -0.65
ACTN1-218ENST00000556343 SLC3A2P08195 630 aaKnown RBP10.98□□□□□ -0.65
ACTN1-218ENST00000556343 PSMA5P28066 241 aa10.98□□□□□ -0.65
ACTN1-218ENST00000556343 HSPA4P34932 840 aa10.98□□□□□ -0.65
ACTN1-218ENST00000556343 SCNN1DP51172 638 aa10.98□□□□□ -0.65
ACTN1-218ENST00000556343 PTH1RQ03431 593 aa10.98□□□□□ -0.65
ACTN1-218ENST00000556343 C9orf131Q5VYM1 1079 aa10.98□□□□□ -0.65
ACTN1-218ENST00000556343 TEX11Q8IYF3 940 aa10.98□□□□□ -0.65
ACTN1-218ENST00000556343 GPC2Q8N158 579 aa10.98□□□□□ -0.65
ACTN1-218ENST00000556343 LCORLQ8N3X6 602 aa10.98□□□□□ -0.65
ACTN1-218ENST00000556343 RIOK1Q9BRS2 568 aaKnown RBP10.98□□□□□ -0.65
ACTN1-218ENST00000556343 USP40Q9NVE5 1235 aa10.98□□□□□ -0.65
ACTN1-218ENST00000556343 DAGLAQ9Y4D2 1042 aa10.98□□□□□ -0.65
ACTN1-218ENST00000556343 ZC3H4Q9UPT8 1303 aaKnown RBP10.98□□□□□ -0.65
ACTN1-218ENST00000556343 ARFGEF1Q9Y6D6 1849 aa10.98□□□□□ -0.65
ACTN1-218ENST00000556343 BRCA1P38398 1863 aaKnown RBP10.98□□□□□ -0.65
ACTN1-218ENST00000556343 AK9Q5TCS8 1911 aa10.97□□□□□ -0.65
ACTN1-218ENST00000556343 CHGBP05060 677 aa10.97□□□□□ -0.65
ACTN1-218ENST00000556343 LMOD1P29536 600 aaPredicted RBP10.97□□□□□ -0.65
ACTN1-218ENST00000556343 ANP32AP39687 249 aaKnown RBP10.97□□□□□ -0.65
ACTN1-218ENST00000556343 DYNLL1P63167 89 aaKnown RBP10.97□□□□□ -0.65
ACTN1-218ENST00000556343 GRIK5Q16478 980 aa10.97□□□□□ -0.65
ACTN1-218ENST00000556343 CFAP100Q494V2 611 aa10.97□□□□□ -0.65
ACTN1-218ENST00000556343 CREB3L3Q68CJ9 461 aa10.97□□□□□ -0.65
ACTN1-218ENST00000556343 IFNL3Q8IZI9 196 aa10.97□□□□□ -0.65
ACTN1-218ENST00000556343 GMLQ99445 158 aa10.97□□□□□ -0.65
ACTN1-218ENST00000556343 FER1L6Q2WGJ9 1857 aa10.96□□□□□ -0.65
ACTN1-218ENST00000556343 ZMYM6O95789 1325 aa10.96□□□□□ -0.65
ACTN1-218ENST00000556343 GSG1L2A8MUP6 293 aa10.96□□□□□ -0.65
ACTN1-218ENST00000556343 FGAP02671 866 aa10.96□□□□□ -0.65
ACTN1-218ENST00000556343 HMGB1P09429 215 aaKnown RBP10.96□□□□□ -0.65
ACTN1-218ENST00000556343 NT5C2P49902 561 aa10.96□□□□□ -0.65
ACTN1-218ENST00000556343 GMPSP49915 693 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-218ENST00000556343 TRDNQ13061 729 aa10.96□□□□□ -0.65
ACTN1-218ENST00000556343 NECTIN1Q15223 517 aa10.96□□□□□ -0.65
ACTN1-218ENST00000556343 ADGRA1Q86SQ6 560 aa10.96□□□□□ -0.65
ACTN1-218ENST00000556343 MTMR14Q8NCE2 650 aa10.96□□□□□ -0.65
ACTN1-218ENST00000556343 SH3RF3Q8TEJ3 882 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-218ENST00000556343 ZNF384Q8TF68 577 aa10.96□□□□□ -0.65
ACTN1-218ENST00000556343 IL25Q9H293 177 aa10.96□□□□□ -0.65
ACTN1-218ENST00000556343 RNF41Q9H4P4 317 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-218ENST00000556343 ZNF287Q9HBT7 754 aa10.96□□□□□ -0.65
ACTN1-218ENST00000556343 TSHZ2Q9NRE2 1034 aa10.96□□□□□ -0.65
ACTN1-218ENST00000556343 ARPP21Q9UBL0 812 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-218ENST00000556343 CNOT7Q9UIV1 285 aaKnown RBP10.96□□□□□ -0.65
ACTN1-218ENST00000556343 ZBTB12Q9Y330 459 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-218ENST00000556343 SLC27A2O14975 620 aa10.95□□□□□ -0.66
ACTN1-218ENST00000556343 PRKAB2O43741 272 aa10.95□□□□□ -0.66
ACTN1-218ENST00000556343 NPM3O75607 178 aaKnown RBP10.95□□□□□ -0.66
ACTN1-218ENST00000556343 POLR3DP05423 398 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-218ENST00000556343 PCP11498 1178 aaKnown RBP10.95□□□□□ -0.66
ACTN1-218ENST00000556343 ZNF280AP59817 542 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-218ENST00000556343 RABEP1Q15276 862 aa10.95□□□□□ -0.66
ACTN1-218ENST00000556343 TSGA10IPQ3SY00 556 aa10.95□□□□□ -0.66
ACTN1-218ENST00000556343 VPS53Q5VIR6 699 aa10.95□□□□□ -0.66
ACTN1-218ENST00000556343 APOBEC3HQ6NTF7 200 aaKnown RBP10.95□□□□□ -0.66
ACTN1-218ENST00000556343 TGFBRAP1Q8WUH2 860 aa10.95□□□□□ -0.66
ACTN1-218ENST00000556343 KCNB2Q92953 911 aa10.95□□□□□ -0.66
ACTN1-218ENST00000556343 MYOZ2Q9NPC6 264 aa10.95□□□□□ -0.66
ACTN1-218ENST00000556343 CHD4Q14839 1912 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 MYH13Q9UKX3 1938 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 SPDYE2BA6NHP3 402 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 MINDY4BA8MYZ0 360 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 ST18O60284 1047 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 HLA-DOAP06340 250 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 SPDYE6P0CI01 402 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 TNNI2P48788 182 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 PRELPP51888 382 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 SBK1Q52WX2 424 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 CDC42EP5Q6NZY7 148 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 TTC6Q86TZ1 520 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 MICALL2Q8IY33 904 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 SDR42E1Q8WUS8 393 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 IDI2Q9BXS1 227 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 TM6SF1Q9BZW5 370 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 CNNM2Q9H8M5 875 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 DCP1AQ9NPI6 582 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-218ENST00000556343 MCM9Q9NXL9 1143 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 DAXXQ9UER7 740 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-218ENST00000556343 TAOK2Q9UL54 1235 aa10.94□□□□□ -0.66
ACTN1-218ENST00000556343 RBM19Q9Y4C8 960 aaKnown RBP10.94□□□□□ -0.66
ACTN1-218ENST00000556343 ZNF541Q9H0D2 1346 aa10.93□□□□□ -0.66
ACTN1-218ENST00000556343 ENTPD3O75355 529 aa10.93□□□□□ -0.66
ACTN1-218ENST00000556343 RHBDL3P58872 404 aa10.93□□□□□ -0.66
ACTN1-218ENST00000556343 PDE4BQ07343 736 aa10.93□□□□□ -0.66
ACTN1-218ENST00000556343 PPARAQ07869 468 aa10.93□□□□□ -0.66
ACTN1-218ENST00000556343 TNFAIP1Q13829 316 aa10.93□□□□□ -0.66
ACTN1-218ENST00000556343 BECN1Q14457 450 aa10.93□□□□□ -0.66
ACTN1-218ENST00000556343 FKBP1CQ5VVH2 108 aa10.93□□□□□ -0.66
ACTN1-218ENST00000556343 MFSD6Q6ZSS7 791 aa10.93□□□□□ -0.66
ACTN1-218ENST00000556343 RALYLQ86SE5 291 aaKnown RBP10.93□□□□□ -0.66
ACTN1-218ENST00000556343 MAPKAPK5Q8IW41 473 aa10.93□□□□□ -0.66
ACTN1-218ENST00000556343 NEK1Q96PY6 1258 aa10.93□□□□□ -0.66
ACTN1-218ENST00000556343 TRIM34Q9BYJ4 488 aa10.93□□□□□ -0.66
ACTN1-218ENST00000556343 KRT23Q9C075 422 aa10.93□□□□□ -0.66
ACTN1-218ENST00000556343 DHX36Q9H2U1 1008 aaKnown RBP10.93□□□□□ -0.66
ACTN1-218ENST00000556343 GPRC5DQ9NZD1 345 aa10.93□□□□□ -0.66
ACTN1-218ENST00000556343 SNX14Q9Y5W7 946 aa10.93□□□□□ -0.66
ACTN1-218ENST00000556343 DOCK2Q92608 1830 aa10.93□□□□□ -0.66
ACTN1-218ENST00000556343 CCDC88AQ3V6T2 1871 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms