RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 CHAF1AQ13111 956 aaPredicted RBP27.69■■■□□ 2.02
STRN3-207ENST00000555358 WASHC4Q2M389 1173 aa27.69■■■□□ 2.02
STRN3-207ENST00000555358 SPATA5Q8NB90 893 aa27.69■■■□□ 2.02
STRN3-207ENST00000555358 NSUN7Q8NE18 718 aaKnown RBP27.69■■■□□ 2.02
STRN3-207ENST00000555358 TFCP2L1Q9NZI6 479 aa27.69■■■□□ 2.02
STRN3-207ENST00000555358 ZFYP08048 801 aaPredicted RBP27.68■■■□□ 2.02
STRN3-207ENST00000555358 ZSCAN25Q6NSZ9 544 aa27.68■■■□□ 2.02
STRN3-207ENST00000555358 CTDNEP1O95476 244 aa27.67■■■□□ 2.02
STRN3-207ENST00000555358 CAVIN2O95810 425 aa27.67■■■□□ 2.02
STRN3-207ENST00000555358 SERPINB2P05120 415 aa27.67■■■□□ 2.02
STRN3-207ENST00000555358 LRRFIP1Q32MZ4 808 aaKnown RBP27.67■■■□□ 2.02
STRN3-207ENST00000555358 SLC51AQ86UW1 340 aa27.67■■■□□ 2.02
STRN3-207ENST00000555358 SMAP1Q8IYB5 467 aaPredicted RBP27.67■■■□□ 2.02
STRN3-207ENST00000555358 PUS7LQ9H0K6 701 aaKnown RBP27.67■■■□□ 2.02
STRN3-207ENST00000555358 CTIFO43310 598 aaKnown RBP27.67■■■□□ 2.02
STRN3-207ENST00000555358 IDH1O75874 414 aaKnown RBP27.67■■■□□ 2.02
STRN3-207ENST00000555358 NAA16Q6N069 864 aaPredicted RBP27.67■■■□□ 2.02
STRN3-207ENST00000555358 DRC7Q8IY82 874 aa27.67■■■□□ 2.02
STRN3-207ENST00000555358 TNS1Q9HBL0 1735 aaKnown RBP27.67■■■□□ 2.02
STRN3-207ENST00000555358 HMGB1P09429 215 aaKnown RBP27.66■■■□□ 2.02
STRN3-207ENST00000555358 HSPD1P10809 573 aaKnown RBP27.66■■■□□ 2.02
STRN3-207ENST00000555358 DDR1Q08345 913 aa27.66■■■□□ 2.02
STRN3-207ENST00000555358 TTF1Q15361 905 aaPredicted RBP27.66■■■□□ 2.02
STRN3-207ENST00000555358 DHX32Q7L7V1 743 aaKnown RBP27.66■■■□□ 2.02
STRN3-207ENST00000555358 AKT1S1Q96B36 256 aa27.66■■■□□ 2.02
STRN3-207ENST00000555358 RCOR1Q9UKL0 485 aa27.66■■■□□ 2.02
STRN3-207ENST00000555358 IQSEC3Q9UPP2 1182 aaPredicted RBP27.66■■■□□ 2.02
STRN3-207ENST00000555358 GYG1P46976 350 aa27.65■■■□□ 2.02
STRN3-207ENST00000555358 IQCB1Q15051 598 aa27.65■■■□□ 2.02
STRN3-207ENST00000555358 SLC9C2Q5TAH2 1124 aa27.65■■■□□ 2.02
STRN3-207ENST00000555358 APPBP2Q92624 585 aa27.65■■■□□ 2.02
STRN3-207ENST00000555358 AGXT2Q9BYV1 514 aa27.65■■■□□ 2.02
STRN3-207ENST00000555358 UBE4AQ14139 1066 aa27.65■■■□□ 2.02
STRN3-207ENST00000555358 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.65■■■□□ 2.02
STRN3-207ENST00000555358 CDC25BP30305 580 aa27.64■■■□□ 2.02
STRN3-207ENST00000555358 ADD2P35612 726 aa27.64■■■□□ 2.02
STRN3-207ENST00000555358 DSCC1Q9BVC3 393 aa27.64■■■□□ 2.02
STRN3-207ENST00000555358 WWC3Q9ULE0 1092 aa27.64■■■□□ 2.02
STRN3-207ENST00000555358 A0A0G2JLW4 131 aa27.64■■■□□ 2.01
STRN3-207ENST00000555358 EXOSC10Q01780 885 aaKnown RBP27.64■■■□□ 2.01
STRN3-207ENST00000555358 DOCK2Q92608 1830 aa27.64■■■□□ 2.01
STRN3-207ENST00000555358 FGD1P98174 961 aa27.63■■■□□ 2.01
STRN3-207ENST00000555358 CEBPZQ03701 1054 aaKnown RBP27.63■■■□□ 2.01
STRN3-207ENST00000555358 COL23A1Q86Y22 540 aaPredicted RBP27.63■■■□□ 2.01
STRN3-207ENST00000555358 ANKRD7Q92527 254 aa27.63■■■□□ 2.01
STRN3-207ENST00000555358 FTOQ9C0B1 505 aaKnown RBP eCLIP27.63■■■□□ 2.01
STRN3-207ENST00000555358 CLIP2Q9UDT6 1046 aa27.63■■■□□ 2.01
STRN3-207ENST00000555358 PTPDC1A2A3K4 754 aa27.63■■■□□ 2.01
STRN3-207ENST00000555358 FOXP2O15409 715 aa27.63■■■□□ 2.01
STRN3-207ENST00000555358 KLRK1P26718 216 aa27.63■■■□□ 2.01
STRN3-207ENST00000555358 APOBRQ0VD83 1088 aa27.63■■■□□ 2.01
STRN3-207ENST00000555358 CCDC144BQ3MJ40 725 aa27.63■■■□□ 2.01
STRN3-207ENST00000555358 SARM1Q6SZW1 724 aa27.63■■■□□ 2.01
STRN3-207ENST00000555358 C11orf57Q6ZUT1 292 aaPredicted RBP27.63■■■□□ 2.01
STRN3-207ENST00000555358 CCDC144CPQ8IYA2 1237 aa27.63■■■□□ 2.01
STRN3-207ENST00000555358 GOLPH3LQ9H4A5 285 aa27.63■■■□□ 2.01
STRN3-207ENST00000555358 SALL1Q9NSC2 1324 aa27.63■■■□□ 2.01
STRN3-207ENST00000555358 POLRMTO00411 1230 aaKnown RBP27.62■■■□□ 2.01
STRN3-207ENST00000555358 CACTINQ8WUQ7 758 aaKnown RBP27.62■■■□□ 2.01
STRN3-207ENST00000555358 CCAR1Q8IX12 1150 aaKnown RBP27.61■■■□□ 2.01
STRN3-207ENST00000555358 ZNF804BA4D1E1 1349 aa27.61■■■□□ 2.01
STRN3-207ENST00000555358 ZNF532Q9HCE3 1301 aa27.61■■■□□ 2.01
STRN3-207ENST00000555358 PDE6AP16499 860 aa27.61■■■□□ 2.01
STRN3-207ENST00000555358 SNW1Q13573 536 aaKnown RBP27.61■■■□□ 2.01
STRN3-207ENST00000555358 CTAGE5O15320 804 aa27.6■■■□□ 2.01
STRN3-207ENST00000555358 ST5P78524 1137 aa27.6■■■□□ 2.01
STRN3-207ENST00000555358 PRDM4Q9UKN5 801 aa27.6■■■□□ 2.01
STRN3-207ENST00000555358 GPAA1O43292 621 aa27.6■■■□□ 2.01
STRN3-207ENST00000555358 FAM84BQ96KN1 310 aaPredicted RBP27.6■■■□□ 2.01
STRN3-207ENST00000555358 USP28Q96RU2 1077 aa27.6■■■□□ 2.01
STRN3-207ENST00000555358 TCRBV5S4A2TA0A5A2 114 aa27.59■■■□□ 2.01
STRN3-207ENST00000555358 FOSBP53539 338 aa27.59■■■□□ 2.01
STRN3-207ENST00000555358 GRAPQ13588 217 aa27.59■■■□□ 2.01
STRN3-207ENST00000555358 STX1AQ16623 288 aa27.59■■■□□ 2.01
STRN3-207ENST00000555358 PPP4R3BQ5MIZ7 849 aa27.59■■■□□ 2.01
STRN3-207ENST00000555358 TTLL5Q6EMB2 1281 aa27.59■■■□□ 2.01
STRN3-207ENST00000555358 GRAPLQ8TC17 118 aaPredicted RBP27.59■■■□□ 2.01
STRN3-207ENST00000555358 UBE3CQ15386 1083 aa27.59■■■□□ 2.01
STRN3-207ENST00000555358 C16orf45Q96MC5 204 aaPredicted RBP27.59■■■□□ 2.01
STRN3-207ENST00000555358 COL1A1P02452 1464 aaPredicted RBP27.58■■■□□ 2.01
STRN3-207ENST00000555358 E7EWF7 191 aa27.58■■■□□ 2.01
STRN3-207ENST00000555358 ATL3Q6DD88 541 aa27.58■■■□□ 2.01
STRN3-207ENST00000555358 ENGASEQ8NFI3 743 aa27.58■■■□□ 2.01
STRN3-207ENST00000555358 HMGB2P26583 209 aaKnown RBP27.57■■■□□ 2
STRN3-207ENST00000555358 CCT2P78371 535 aaKnown RBP27.57■■■□□ 2
STRN3-207ENST00000555358 ILDR1Q86SU0 546 aaPredicted RBP27.57■■■□□ 2
STRN3-207ENST00000555358 MRFAP1L1Q96HT8 127 aa27.57■■■□□ 2
STRN3-207ENST00000555358 ANKRD2Q9GZV1 360 aa27.57■■■□□ 2
STRN3-207ENST00000555358 CRY2Q49AN0 593 aa27.57■■■□□ 2
STRN3-207ENST00000555358 CAVIN4Q5BKX8 364 aa27.57■■■□□ 2
STRN3-207ENST00000555358 PDCL2Q8N4E4 241 aa27.57■■■□□ 2
STRN3-207ENST00000555358 MAGEB6Q8N7X4 407 aa27.57■■■□□ 2
STRN3-207ENST00000555358 NCOA5Q9HCD5 579 aaKnown RBP27.57■■■□□ 2
STRN3-207ENST00000555358 GOLGA6L19H0YKK7 550 aa27.56■■■□□ 2
STRN3-207ENST00000555358 RPGRQ92834 1020 aaKnown RBP27.56■■■□□ 2
STRN3-207ENST00000555358 SMTNL1A8MU46 457 aa27.56■■■□□ 2
STRN3-207ENST00000555358 VPS37DQ86XT2 251 aa27.56■■■□□ 2
STRN3-207ENST00000555358 FBXO41Q8TF61 875 aa27.56■■■□□ 2
STRN3-207ENST00000555358 PDIA3P30101 505 aaKnown RBP27.55■■■□□ 2
STRN3-207ENST00000555358 MAP3K12Q12852 859 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms