RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 SEMA3EO15041 775 aa24.77■■□□□ 1.56
ARHGEF40-204ENST00000555038 RCAN1P53805 252 aa24.77■■□□□ 1.56
ARHGEF40-204ENST00000555038 CEBPZQ03701 1054 aaKnown RBP24.77■■□□□ 1.56
ARHGEF40-204ENST00000555038 CAVIN4Q5BKX8 364 aa24.77■■□□□ 1.56
ARHGEF40-204ENST00000555038 TMEM67Q5HYA8 995 aa24.77■■□□□ 1.56
ARHGEF40-204ENST00000555038 ADALQ6DHV7 355 aa24.77■■□□□ 1.56
ARHGEF40-204ENST00000555038 MFSD6Q6ZSS7 791 aa24.77■■□□□ 1.56
ARHGEF40-204ENST00000555038 CKAP2LQ8IYA6 745 aa24.77■■□□□ 1.56
ARHGEF40-204ENST00000555038 SLC4A4Q9Y6R1 1079 aa24.77■■□□□ 1.56
ARHGEF40-204ENST00000555038 NHSQ6T4R5 1651 aa24.77■■□□□ 1.56
ARHGEF40-204ENST00000555038 CASZ1Q86V15 1759 aa24.77■■□□□ 1.56
ARHGEF40-204ENST00000555038 ZBTB22O15209 634 aa24.77■■□□□ 1.56
ARHGEF40-204ENST00000555038 TDO2P48775 406 aa24.77■■□□□ 1.56
ARHGEF40-204ENST00000555038 PDS5AQ29RF7 1337 aaKnown RBP24.77■■□□□ 1.56
ARHGEF40-204ENST00000555038 ME1P48163 572 aa24.76■■□□□ 1.55
ARHGEF40-204ENST00000555038 SART3Q15020 963 aaKnown RBP24.76■■□□□ 1.55
ARHGEF40-204ENST00000555038 MYSM1Q5VVJ2 828 aa24.76■■□□□ 1.55
ARHGEF40-204ENST00000555038 TMED8Q6PL24 325 aaPredicted RBP24.76■■□□□ 1.55
ARHGEF40-204ENST00000555038 LCORLQ8N3X6 602 aa24.76■■□□□ 1.55
ARHGEF40-204ENST00000555038 LINC00301Q8NCQ3 95 aa24.76■■□□□ 1.55
ARHGEF40-204ENST00000555038 ENGASEQ8NFI3 743 aa24.76■■□□□ 1.55
ARHGEF40-204ENST00000555038 FBXO41Q8TF61 875 aa24.76■■□□□ 1.55
ARHGEF40-204ENST00000555038 DENND2AQ9ULE3 1009 aa24.76■■□□□ 1.55
ARHGEF40-204ENST00000555038 KINO60870 393 aaKnown RBP24.75■■□□□ 1.55
ARHGEF40-204ENST00000555038 KIF23Q02241 960 aaPredicted RBP24.75■■□□□ 1.55
ARHGEF40-204ENST00000555038 ANO6Q4KMQ2 910 aa24.75■■□□□ 1.55
ARHGEF40-204ENST00000555038 NFXL1Q6ZNB6 911 aa24.75■■□□□ 1.55
ARHGEF40-204ENST00000555038 TMTC2Q8N394 836 aa24.75■■□□□ 1.55
ARHGEF40-204ENST00000555038 MRPS27Q92552 414 aaKnown RBP24.75■■□□□ 1.55
ARHGEF40-204ENST00000555038 THSD7AQ9UPZ6 1657 aa24.75■■□□□ 1.55
ARHGEF40-204ENST00000555038 GTF2E1P29083 439 aaPredicted RBP24.75■■□□□ 1.55
ARHGEF40-204ENST00000555038 SYNE3Q6ZMZ3 975 aa24.75■■□□□ 1.55
ARHGEF40-204ENST00000555038 C8orf37Q96NL8 207 aa24.75■■□□□ 1.55
ARHGEF40-204ENST00000555038 FTOQ9C0B1 505 aaKnown RBP eCLIP24.75■■□□□ 1.55
ARHGEF40-204ENST00000555038 ZSWIM5Q9P217 1185 aa24.75■■□□□ 1.55
ARHGEF40-204ENST00000555038 ANAPC4Q9UJX5 808 aa24.75■■□□□ 1.55
ARHGEF40-204ENST00000555038 MINPP1Q9UNW1 487 aa24.75■■□□□ 1.55
ARHGEF40-204ENST00000555038 COL4A1P02462 1669 aa24.74■■□□□ 1.55
ARHGEF40-204ENST00000555038 GOLGA8AA7E2F4 631 aa24.74■■□□□ 1.55
ARHGEF40-204ENST00000555038 IFIT3O14879 490 aaKnown RBP24.74■■□□□ 1.55
ARHGEF40-204ENST00000555038 CYP7A1P22680 504 aa24.74■■□□□ 1.55
ARHGEF40-204ENST00000555038 SNW1Q13573 536 aaKnown RBP24.74■■□□□ 1.55
ARHGEF40-204ENST00000555038 STK38Q15208 465 aa24.74■■□□□ 1.55
ARHGEF40-204ENST00000555038 TDRD7Q8NHU6 1098 aaKnown RBP24.74■■□□□ 1.55
ARHGEF40-204ENST00000555038 WASF1Q92558 559 aa24.74■■□□□ 1.55
ARHGEF40-204ENST00000555038 NAP1L5Q96NT1 182 aaPredicted RBP24.74■■□□□ 1.55
ARHGEF40-204ENST00000555038 ALG1Q9BT22 464 aa24.74■■□□□ 1.55
ARHGEF40-204ENST00000555038 BCL2L12Q9HB09 334 aa24.74■■□□□ 1.55
ARHGEF40-204ENST00000555038 CBX8Q9HC52 389 aa24.74■■□□□ 1.55
ARHGEF40-204ENST00000555038 SLC12A7Q9Y666 1083 aa24.74■■□□□ 1.55
ARHGEF40-204ENST00000555038 BTAF1O14981 1849 aa24.74■■□□□ 1.55
ARHGEF40-204ENST00000555038 CCDC69A6NI79 296 aa24.73■■□□□ 1.55
ARHGEF40-204ENST00000555038 GOLGA6L6A8MZA4 724 aa24.73■■□□□ 1.55
ARHGEF40-204ENST00000555038 TBC1D9BQ66K14 1250 aa24.73■■□□□ 1.55
ARHGEF40-204ENST00000555038 FSIP1Q8NA03 581 aa24.73■■□□□ 1.55
ARHGEF40-204ENST00000555038 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.73■■□□□ 1.55
ARHGEF40-204ENST00000555038 IARSP41252 1262 aaKnown RBP24.72■■□□□ 1.55
ARHGEF40-204ENST00000555038 TERF1P54274 439 aa24.72■■□□□ 1.55
ARHGEF40-204ENST00000555038 CTDSPL2Q05D32 466 aa24.72■■□□□ 1.55
ARHGEF40-204ENST00000555038 SF3A1Q15459 793 aaKnown RBP24.72■■□□□ 1.55
ARHGEF40-204ENST00000555038 NTRK3Q16288 839 aa24.72■■□□□ 1.55
ARHGEF40-204ENST00000555038 C3orf67Q6ZVT6 689 aa24.72■■□□□ 1.55
ARHGEF40-204ENST00000555038 NLRP3Q96P20 1036 aa24.72■■□□□ 1.55
ARHGEF40-204ENST00000555038 SETDB2Q96T68 719 aa24.72■■□□□ 1.55
ARHGEF40-204ENST00000555038 ANKRD2Q9GZV1 360 aa24.72■■□□□ 1.55
ARHGEF40-204ENST00000555038 GOLPH3LQ9H4A5 285 aa24.72■■□□□ 1.55
ARHGEF40-204ENST00000555038 PCDHA7Q9UN72 937 aa24.72■■□□□ 1.55
ARHGEF40-204ENST00000555038 MAGEB6P1A0A0J9YX57 407 aa24.72■■□□□ 1.55
ARHGEF40-204ENST00000555038 PPFIA3O75145 1194 aa24.72■■□□□ 1.55
ARHGEF40-204ENST00000555038 KIAA2012Q0VF49 1180 aa24.72■■□□□ 1.55
ARHGEF40-204ENST00000555038 STX1AQ16623 288 aa24.72■■□□□ 1.55
ARHGEF40-204ENST00000555038 MICU3Q86XE3 530 aa24.72■■□□□ 1.55
ARHGEF40-204ENST00000555038 ERICH2A1L162 156 aa24.71■■□□□ 1.55
ARHGEF40-204ENST00000555038 IGSF3O75054 1194 aa24.71■■□□□ 1.55
ARHGEF40-204ENST00000555038 PCP11498 1178 aaKnown RBP24.71■■□□□ 1.55
ARHGEF40-204ENST00000555038 CDC27P30260 824 aa24.71■■□□□ 1.55
ARHGEF40-204ENST00000555038 OTUD7BQ6GQQ9 843 aa24.71■■□□□ 1.55
ARHGEF40-204ENST00000555038 NKX2-3Q8TAU0 364 aa24.71■■□□□ 1.55
ARHGEF40-204ENST00000555038 SPATA31A6Q5VVP1 1343 aa24.7■■□□□ 1.55
ARHGEF40-204ENST00000555038 SPTLC2O15270 562 aa24.7■■□□□ 1.55
ARHGEF40-204ENST00000555038 PRKAB2O43741 272 aa24.7■■□□□ 1.55
ARHGEF40-204ENST00000555038 ZPR1O75312 459 aa24.7■■□□□ 1.55
ARHGEF40-204ENST00000555038 IFNAR1P17181 557 aa24.7■■□□□ 1.55
ARHGEF40-204ENST00000555038 GYG1P46976 350 aa24.7■■□□□ 1.55
ARHGEF40-204ENST00000555038 ZNF165P49910 485 aa24.7■■□□□ 1.55
ARHGEF40-204ENST00000555038 TRIM29Q14134 588 aa24.7■■□□□ 1.55
ARHGEF40-204ENST00000555038 ANO1Q5XXA6 986 aa24.7■■□□□ 1.55
ARHGEF40-204ENST00000555038 VPS37DQ86XT2 251 aa24.7■■□□□ 1.55
ARHGEF40-204ENST00000555038 RAB11FIP4Q86YS3 637 aa24.7■■□□□ 1.55
ARHGEF40-204ENST00000555038 RAI14Q9P0K7 980 aa24.7■■□□□ 1.55
ARHGEF40-204ENST00000555038 CACNA1SQ13698 1873 aa24.7■■□□□ 1.54
ARHGEF40-204ENST00000555038 CCDC196A0A1B0GTZ2 297 aa24.7■■□□□ 1.54
ARHGEF40-204ENST00000555038 HSPA1LP34931 641 aa24.7■■□□□ 1.54
ARHGEF40-204ENST00000555038 RPS8P62241 208 aaKnown RBP24.7■■□□□ 1.54
ARHGEF40-204ENST00000555038 PPARAQ07869 468 aa24.7■■□□□ 1.54
ARHGEF40-204ENST00000555038 PPP2R5BQ15173 497 aa24.7■■□□□ 1.54
ARHGEF40-204ENST00000555038 FBXO33Q7Z6M2 555 aa24.7■■□□□ 1.54
ARHGEF40-204ENST00000555038 FMR1NBQ8N0W7 255 aaPredicted RBP24.7■■□□□ 1.54
ARHGEF40-204ENST00000555038 FAM217BQ9NTX9 383 aaPredicted RBP24.7■■□□□ 1.54
ARHGEF40-204ENST00000555038 COL1A1P02452 1464 aaPredicted RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms