RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 MAGEB6P1A0A0J9YX57 407 aa19.79■□□□□ 0.76
SPTLC2-203ENST00000554901 EGFRP00533 1210 aa19.79■□□□□ 0.76
SPTLC2-203ENST00000554901 CHMLP26374 656 aa19.79■□□□□ 0.76
SPTLC2-203ENST00000554901 RBM26Q5T8P6 1007 aaKnown RBP19.79■□□□□ 0.76
SPTLC2-203ENST00000554901 RUFY2Q8WXA3 655 aa19.79■□□□□ 0.76
SPTLC2-203ENST00000554901 OSBP2Q969R2 916 aa19.79■□□□□ 0.76
SPTLC2-203ENST00000554901 RIOK1Q9BRS2 568 aaKnown RBP19.79■□□□□ 0.76
SPTLC2-203ENST00000554901 GPBP1L1Q9HC44 474 aaPredicted RBP19.79■□□□□ 0.76
SPTLC2-203ENST00000554901 CDC45O75419 566 aa19.78■□□□□ 0.76
SPTLC2-203ENST00000554901 NBPF9Q3BBW0 867 aa19.78■□□□□ 0.76
SPTLC2-203ENST00000554901 SPDYE2Q495Y8 402 aa19.78■□□□□ 0.76
SPTLC2-203ENST00000554901 FKBP1CQ5VVH2 108 aa19.78■□□□□ 0.76
SPTLC2-203ENST00000554901 CASC1Q6TDU7 716 aa19.78■□□□□ 0.76
SPTLC2-203ENST00000554901 AIDAQ96BJ3 306 aa19.78■□□□□ 0.76
SPTLC2-203ENST00000554901 PUS7LQ9H0K6 701 aaKnown RBP19.78■□□□□ 0.76
SPTLC2-203ENST00000554901 NMRK2Q9NPI5 230 aa19.78■□□□□ 0.76
SPTLC2-203ENST00000554901 AATFQ9NY61 560 aaKnown RBP eCLIP19.78■□□□□ 0.76
SPTLC2-203ENST00000554901 PGAP2Q9UHJ9 254 aa19.78■□□□□ 0.76
SPTLC2-203ENST00000554901 RAD50Q92878 1312 aa19.78■□□□□ 0.76
SPTLC2-203ENST00000554901 PITPNM2Q9BZ72 1349 aa19.78■□□□□ 0.76
SPTLC2-203ENST00000554901 HIRAP54198 1017 aaPredicted RBP19.77■□□□□ 0.76
SPTLC2-203ENST00000554901 MFAP1P55081 439 aaKnown RBP19.77■□□□□ 0.76
SPTLC2-203ENST00000554901 RHBDL3P58872 404 aa19.77■□□□□ 0.76
SPTLC2-203ENST00000554901 MCMDC2Q4G0Z9 681 aa19.77■□□□□ 0.76
SPTLC2-203ENST00000554901 CDC42EP5Q6NZY7 148 aa19.77■□□□□ 0.76
SPTLC2-203ENST00000554901 MIGA1Q8NAN2 632 aa19.77■□□□□ 0.76
SPTLC2-203ENST00000554901 ZNF526Q8TF50 670 aaPredicted RBP19.77■□□□□ 0.76
SPTLC2-203ENST00000554901 USP40Q9NVE5 1235 aa19.77■□□□□ 0.76
SPTLC2-203ENST00000554901 TMOD2Q9NZR1 351 aa19.77■□□□□ 0.76
SPTLC2-203ENST00000554901 NPM3O75607 178 aaKnown RBP19.76■□□□□ 0.75
SPTLC2-203ENST00000554901 CHGBP05060 677 aa19.76■□□□□ 0.75
SPTLC2-203ENST00000554901 NMIQ13287 307 aaPredicted RBP19.76■□□□□ 0.75
SPTLC2-203ENST00000554901 TDRD3Q9H7E2 651 aaKnown RBP19.76■□□□□ 0.75
SPTLC2-203ENST00000554901 PCDHAC2Q9Y5I4 1007 aa19.76■□□□□ 0.75
SPTLC2-203ENST00000554901 A0A0D9SFI3 127 aa19.76■□□□□ 0.75
SPTLC2-203ENST00000554901 MBD4O95243 580 aa19.76■□□□□ 0.75
SPTLC2-203ENST00000554901 GNAT2P19087 354 aa19.76■□□□□ 0.75
SPTLC2-203ENST00000554901 SLFNL1Q499Z3 407 aa19.76■□□□□ 0.75
SPTLC2-203ENST00000554901 CWC27Q6UX04 472 aaKnown RBP19.76■□□□□ 0.75
SPTLC2-203ENST00000554901 FAM227BQ96M60 508 aa19.76■□□□□ 0.75
SPTLC2-203ENST00000554901 IDI2Q9BXS1 227 aa19.76■□□□□ 0.75
SPTLC2-203ENST00000554901 CRNKL1Q9BZJ0 848 aaKnown RBP19.76■□□□□ 0.75
SPTLC2-203ENST00000554901 ZNF70Q9UC06 446 aaPredicted RBP19.76■□□□□ 0.75
SPTLC2-203ENST00000554901 ADAMTSL1Q8N6G6 1762 aa19.75■□□□□ 0.75
SPTLC2-203ENST00000554901 GPAA1O43292 621 aa19.75■□□□□ 0.75
SPTLC2-203ENST00000554901 TNFAIP1Q13829 316 aa19.75■□□□□ 0.75
SPTLC2-203ENST00000554901 APOBEC3FQ8IUX4 373 aaKnown RBP19.75■□□□□ 0.75
SPTLC2-203ENST00000554901 STRBPQ96SI9 672 aaKnown RBP19.75■□□□□ 0.75
SPTLC2-203ENST00000554901 RPAP1Q9BWH6 1393 aaPredicted RBP19.75■□□□□ 0.75
SPTLC2-203ENST00000554901 ECM29Q5VYK3 1845 aa19.74■□□□□ 0.75
SPTLC2-203ENST00000554901 DYNLL1P63167 89 aaKnown RBP19.74■□□□□ 0.75
SPTLC2-203ENST00000554901 LDHDQ86WU2 507 aa19.74■□□□□ 0.75
SPTLC2-203ENST00000554901 TEX11Q8IYF3 940 aa19.74■□□□□ 0.75
SPTLC2-203ENST00000554901 LCORLQ8N3X6 602 aa19.74■□□□□ 0.75
SPTLC2-203ENST00000554901 SH3RF3Q8TEJ3 882 aaPredicted RBP19.74■□□□□ 0.75
SPTLC2-203ENST00000554901 SEC62Q99442 399 aaKnown RBP19.74■□□□□ 0.75
SPTLC2-203ENST00000554901 M0R2C6 588 aa19.73■□□□□ 0.75
SPTLC2-203ENST00000554901 EAPPQ56P03 285 aaPredicted RBP19.73■□□□□ 0.75
SPTLC2-203ENST00000554901 FAM83AQ86UY5 434 aa19.73■□□□□ 0.75
SPTLC2-203ENST00000554901 DCPSQ96C86 337 aaKnown RBP19.73■□□□□ 0.75
SPTLC2-203ENST00000554901 ARMT1Q9H993 441 aa19.73■□□□□ 0.75
SPTLC2-203ENST00000554901 GGA3Q9NZ52 723 aa19.73■□□□□ 0.75
SPTLC2-203ENST00000554901 CCDC171Q6TFL3 1326 aa19.73■□□□□ 0.75
SPTLC2-203ENST00000554901 CLRN2A0PK11 232 aa19.72■□□□□ 0.75
SPTLC2-203ENST00000554901 ENTPD3O75355 529 aa19.72■□□□□ 0.75
SPTLC2-203ENST00000554901 WDHD1O75717 1129 aaPredicted RBP19.72■□□□□ 0.75
SPTLC2-203ENST00000554901 TNNI2P48788 182 aa19.72■□□□□ 0.75
SPTLC2-203ENST00000554901 ANGEL2Q5VTE6 544 aaKnown RBP19.72■□□□□ 0.75
SPTLC2-203ENST00000554901 GIMAP6Q6P9H5 292 aa19.72■□□□□ 0.75
SPTLC2-203ENST00000554901 ATP8A2Q9NTI2 1148 aa19.72■□□□□ 0.75
SPTLC2-203ENST00000554901 SGSM2O43147 1006 aa19.71■□□□□ 0.75
SPTLC2-203ENST00000554901 EIF5BO60841 1220 aaKnown RBP19.71■□□□□ 0.75
SPTLC2-203ENST00000554901 ZNF784Q8NCA9 323 aaPredicted RBP19.71■□□□□ 0.75
SPTLC2-203ENST00000554901 VEZTQ9HBM0 779 aa19.71■□□□□ 0.75
SPTLC2-203ENST00000554901 PPP2R3BQ9Y5P8 575 aa19.71■□□□□ 0.75
SPTLC2-203ENST00000554901 DDRGK1Q96HY6 314 aa19.71■□□□□ 0.75
SPTLC2-203ENST00000554901 ESYT1Q9BSJ8 1104 aa19.71■□□□□ 0.75
SPTLC2-203ENST00000554901 SLC4A4Q9Y6R1 1079 aa19.71■□□□□ 0.75
SPTLC2-203ENST00000554901 PATL2C9JE40 543 aaKnown RBP19.7■□□□□ 0.74
SPTLC2-203ENST00000554901 KIF3CO14782 793 aa19.7■□□□□ 0.74
SPTLC2-203ENST00000554901 USP5P45974 858 aa19.7■□□□□ 0.74
SPTLC2-203ENST00000554901 ZNF589Q86UQ0 364 aaPredicted RBP19.7■□□□□ 0.74
SPTLC2-203ENST00000554901 SULF1Q8IWU6 871 aa19.7■□□□□ 0.74
SPTLC2-203ENST00000554901 TGFBRAP1Q8WUH2 860 aa19.7■□□□□ 0.74
SPTLC2-203ENST00000554901 FAM151AQ8WW52 585 aa19.7■□□□□ 0.74
SPTLC2-203ENST00000554901 FAM198AQ9UFP1 575 aa19.7■□□□□ 0.74
SPTLC2-203ENST00000554901 ASTN2O75129 1339 aaPredicted RBP19.69■□□□□ 0.74
SPTLC2-203ENST00000554901 COL2A1P02458 1487 aaPredicted RBP19.69■□□□□ 0.74
SPTLC2-203ENST00000554901 NFIAQ12857 509 aa19.69■□□□□ 0.74
SPTLC2-203ENST00000554901 CDC37L1Q7L3B6 337 aa19.69■□□□□ 0.74
SPTLC2-203ENST00000554901 NACAP1Q9BZK3 213 aa19.69■□□□□ 0.74
SPTLC2-203ENST00000554901 MKRN1Q9UHC7 482 aaKnown RBP19.69■□□□□ 0.74
SPTLC2-203ENST00000554901 CLEC11AQ9Y240 323 aa19.69■□□□□ 0.74
SPTLC2-203ENST00000554901 FLT1P17948 1338 aa19.69■□□□□ 0.74
SPTLC2-203ENST00000554901 TCP10L2B9ZVM9 353 aa19.68■□□□□ 0.74
SPTLC2-203ENST00000554901 CACNB3P54284 484 aa19.68■□□□□ 0.74
SPTLC2-203ENST00000554901 CCDC129Q6ZRS4 1044 aa19.68■□□□□ 0.74
SPTLC2-203ENST00000554901 DEFB129Q9H1M3 183 aa19.68■□□□□ 0.74
SPTLC2-203ENST00000554901 DHX36Q9H2U1 1008 aaKnown RBP19.68■□□□□ 0.74
SPTLC2-203ENST00000554901 DCP1AQ9NPI6 582 aaPredicted RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms