RNA–Protein interactions for RNA: ENST00000554822.5

LINC01550-204, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 3

Gene LINC01550, Length 852 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-204ENST00000554822 SOX4Q06945 474 aaPredicted RBP8.17□□□□□ -1.1
LINC01550-204ENST00000554822 STK35Q8TDR2 534 aa8.17□□□□□ -1.1
LINC01550-204ENST00000554822 FRMD6Q96NE9 622 aa8.17□□□□□ -1.1
LINC01550-204ENST00000554822 KCNF1Q9H3M0 494 aa8.17□□□□□ -1.1
LINC01550-204ENST00000554822 CCDC86Q9H6F5 360 aaKnown RBP8.17□□□□□ -1.1
LINC01550-204ENST00000554822 FAM8A1Q9UBU6 413 aa8.17□□□□□ -1.1
LINC01550-204ENST00000554822 SGO2Q562F6 1265 aa8.16□□□□□ -1.1
LINC01550-204ENST00000554822 AKAP4Q5JQC9 854 aa8.16□□□□□ -1.1
LINC01550-204ENST00000554822 XP32Q5T750 250 aa8.16□□□□□ -1.1
LINC01550-204ENST00000554822 FAM20CQ8IXL6 584 aa8.16□□□□□ -1.1
LINC01550-204ENST00000554822 WDR89Q96FK6 387 aaPredicted RBP8.16□□□□□ -1.1
LINC01550-204ENST00000554822 NECAB3Q96P71 396 aaPredicted RBP8.16□□□□□ -1.1
LINC01550-204ENST00000554822 PARP2Q9UGN5 583 aa8.16□□□□□ -1.1
LINC01550-204ENST00000554822 NCAPD3P42695 1498 aa8.15□□□□□ -1.1
LINC01550-204ENST00000554822 HMX2A2RU54 273 aa8.15□□□□□ -1.1
LINC01550-204ENST00000554822 AOC2O75106 756 aa8.15□□□□□ -1.1
LINC01550-204ENST00000554822 GSTP1P09211 210 aaKnown RBP8.15□□□□□ -1.1
LINC01550-204ENST00000554822 ADH5P11766 374 aa8.15□□□□□ -1.1
LINC01550-204ENST00000554822 LIG1P18858 919 aa8.15□□□□□ -1.1
LINC01550-204ENST00000554822 EIF4BP23588 611 aaKnown RBP8.15□□□□□ -1.1
LINC01550-204ENST00000554822 FGD1P98174 961 aa8.15□□□□□ -1.1
LINC01550-204ENST00000554822 HP1BP3Q5SSJ5 553 aaPredicted RBP8.15□□□□□ -1.1
LINC01550-204ENST00000554822 FBXO33Q7Z6M2 555 aa8.15□□□□□ -1.1
LINC01550-204ENST00000554822 SULF2Q8IWU5 870 aa8.15□□□□□ -1.1
LINC01550-204ENST00000554822 TRIM42Q8IWZ5 723 aa8.15□□□□□ -1.1
LINC01550-204ENST00000554822 C2CD4AQ8NCU7 369 aaPredicted RBP8.15□□□□□ -1.1
LINC01550-204ENST00000554822 AK5Q9Y6K8 562 aa8.15□□□□□ -1.1
LINC01550-204ENST00000554822 SPATA31D1Q6ZQQ2 1576 aa8.14□□□□□ -1.11
LINC01550-204ENST00000554822 ENC1O14682 589 aa8.14□□□□□ -1.11
LINC01550-204ENST00000554822 PAGE1O75459 146 aa8.14□□□□□ -1.11
LINC01550-204ENST00000554822 FSTP19883 344 aa8.14□□□□□ -1.11
LINC01550-204ENST00000554822 USP11P51784 963 aa8.14□□□□□ -1.11
LINC01550-204ENST00000554822 BEND4Q6ZU67 534 aa8.14□□□□□ -1.11
LINC01550-204ENST00000554822 PDZD3Q86UT5 571 aa8.14□□□□□ -1.11
LINC01550-204ENST00000554822 KCNB2Q92953 911 aa8.14□□□□□ -1.11
LINC01550-204ENST00000554822 FAM161BQ96MY7 647 aa8.14□□□□□ -1.11
LINC01550-204ENST00000554822 WDR18Q9BV38 432 aa8.14□□□□□ -1.11
LINC01550-204ENST00000554822 CEP44Q9C0F1 390 aa8.14□□□□□ -1.11
LINC01550-204ENST00000554822 C7orf69Q9H7B7 122 aa8.14□□□□□ -1.11
LINC01550-204ENST00000554822 PPM1HQ9ULR3 514 aa8.14□□□□□ -1.11
LINC01550-204ENST00000554822 HECW2Q9P2P5 1572 aa8.14□□□□□ -1.11
LINC01550-204ENST00000554822 ZNF862O60290 1169 aa8.13□□□□□ -1.11
LINC01550-204ENST00000554822 NME2P22392 152 aa8.13□□□□□ -1.11
LINC01550-204ENST00000554822 ARNTP27540 789 aa8.13□□□□□ -1.11
LINC01550-204ENST00000554822 MAP4P27816 1152 aaKnown RBP8.13□□□□□ -1.11
LINC01550-204ENST00000554822 RXRBP28702 533 aa8.13□□□□□ -1.11
LINC01550-204ENST00000554822 CDPF1Q6NVV7 123 aa8.13□□□□□ -1.11
LINC01550-204ENST00000554822 DYMQ7RTS9 669 aa8.13□□□□□ -1.11
LINC01550-204ENST00000554822 CLEC10AQ8IUN9 316 aa8.13□□□□□ -1.11
LINC01550-204ENST00000554822 FBLIM1Q8WUP2 373 aa8.13□□□□□ -1.11
LINC01550-204ENST00000554822 FAM83CQ9BQN1 747 aa8.13□□□□□ -1.11
LINC01550-204ENST00000554822 CBX8Q9HC52 389 aa8.13□□□□□ -1.11
LINC01550-204ENST00000554822 PPP1R9AQ9ULJ8 1098 aa8.13□□□□□ -1.11
LINC01550-204ENST00000554822 AP4E1Q9UPM8 1137 aa8.13□□□□□ -1.11
LINC01550-204ENST00000554822 HIF3AQ9Y2N7 669 aa8.13□□□□□ -1.11
LINC01550-204ENST00000554822 ERCC3P19447 782 aa8.12□□□□□ -1.11
LINC01550-204ENST00000554822 DAB2P98082 770 aa8.12□□□□□ -1.11
LINC01550-204ENST00000554822 XPCQ01831 940 aaPredicted RBP8.12□□□□□ -1.11
LINC01550-204ENST00000554822 PSMD2Q13200 908 aa8.12□□□□□ -1.11
LINC01550-204ENST00000554822 TMCO4Q5TGY1 634 aa8.12□□□□□ -1.11
LINC01550-204ENST00000554822 MAP1SQ66K74 1059 aaPredicted RBP8.12□□□□□ -1.11
LINC01550-204ENST00000554822 TTF2Q9UNY4 1162 aaKnown RBP8.12□□□□□ -1.11
LINC01550-204ENST00000554822 ACTL7BQ9Y614 415 aa8.12□□□□□ -1.11
LINC01550-204ENST00000554822 CELA3AP09093 270 aa8.11□□□□□ -1.11
LINC01550-204ENST00000554822 BMP6P22004 513 aa8.11□□□□□ -1.11
LINC01550-204ENST00000554822 ZMYM1Q5SVZ6 1142 aa8.11□□□□□ -1.11
LINC01550-204ENST00000554822 RASIP1Q5U651 963 aa8.11□□□□□ -1.11
LINC01550-204ENST00000554822 MPRIPQ6WCQ1 1025 aa8.11□□□□□ -1.11
LINC01550-204ENST00000554822 GRIN3AQ8TCU5 1115 aa8.11□□□□□ -1.11
LINC01550-204ENST00000554822 EMILIN2Q9BXX0 1053 aa8.11□□□□□ -1.11
LINC01550-204ENST00000554822 FAM105AQ9NUU6 356 aa8.11□□□□□ -1.11
LINC01550-204ENST00000554822 IGLV1-40P01703 118 aa8.1□□□□□ -1.11
LINC01550-204ENST00000554822 ASPAP45381 313 aa8.1□□□□□ -1.11
LINC01550-204ENST00000554822 ANKRD24Q8TF21 1146 aa8.1□□□□□ -1.11
LINC01550-204ENST00000554822 KRT82Q9NSB4 513 aa8.1□□□□□ -1.11
LINC01550-204ENST00000554822 THOC2Q8NI27 1593 aaKnown RBP8.1□□□□□ -1.11
LINC01550-204ENST00000554822 TMPRSS2O15393 492 aa8.09□□□□□ -1.11
LINC01550-204ENST00000554822 SLFN14P0C7P3 912 aa8.09□□□□□ -1.11
LINC01550-204ENST00000554822 RAB6AP20340 208 aa8.09□□□□□ -1.11
LINC01550-204ENST00000554822 ZNF252P-AS1Q0IIN9 211 aa8.09□□□□□ -1.11
LINC01550-204ENST00000554822 NFIAQ12857 509 aa8.09□□□□□ -1.11
LINC01550-204ENST00000554822 NFKBIBQ15653 356 aa8.09□□□□□ -1.11
LINC01550-204ENST00000554822 RNF43Q68DV7 783 aa8.09□□□□□ -1.11
LINC01550-204ENST00000554822 TMC4Q7Z404 712 aa8.09□□□□□ -1.11
LINC01550-204ENST00000554822 Q8N3U1 123 aa8.09□□□□□ -1.11
LINC01550-204ENST00000554822 SAMM50Q9Y512 469 aa8.09□□□□□ -1.11
LINC01550-204ENST00000554822 FAM95CA0A1B0GW59 222 aa8.08□□□□□ -1.12
LINC01550-204ENST00000554822 NFICP08651 508 aa8.08□□□□□ -1.12
LINC01550-204ENST00000554822 KIF4BQ2VIQ3 1234 aa8.08□□□□□ -1.12
LINC01550-204ENST00000554822 MEI1Q5TIA1 1274 aa8.08□□□□□ -1.12
LINC01550-204ENST00000554822 GPBAR1Q8TDU6 330 aa8.08□□□□□ -1.12
LINC01550-204ENST00000554822 CRIM1Q9NZV1 1036 aa8.08□□□□□ -1.12
LINC01550-204ENST00000554822 SYNGAP1Q96PV0 1343 aa8.07□□□□□ -1.12
LINC01550-204ENST00000554822 ABCC8Q09428 1581 aa8.07□□□□□ -1.12
LINC01550-204ENST00000554822 GSC2O15499 205 aa8.07□□□□□ -1.12
LINC01550-204ENST00000554822 ID3Q02535 119 aa8.07□□□□□ -1.12
LINC01550-204ENST00000554822 TRIM26Q12899 539 aaPredicted RBP8.07□□□□□ -1.12
LINC01550-204ENST00000554822 CCDC85BQ15834 202 aaPredicted RBP8.07□□□□□ -1.12
LINC01550-204ENST00000554822 PCNX4Q63HM2 1172 aa8.07□□□□□ -1.12
LINC01550-204ENST00000554822 SV2BQ7L1I2 683 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms