RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 GNB5O14775 395 aa8.17□□□□□ -1.1
CHD8-207ENST00000554384 TLR3O15455 904 aaKnown RBP8.17□□□□□ -1.1
CHD8-207ENST00000554384 DLGAP3O95886 979 aa8.17□□□□□ -1.1
CHD8-207ENST00000554384 F13A1P00488 732 aa8.17□□□□□ -1.1
CHD8-207ENST00000554384 RLBP1P12271 317 aa8.17□□□□□ -1.1
CHD8-207ENST00000554384 DNAJA1P31689 397 aaKnown RBP8.17□□□□□ -1.1
CHD8-207ENST00000554384 CRKP46108 304 aa8.17□□□□□ -1.1
CHD8-207ENST00000554384 CDK8P49336 464 aa8.17□□□□□ -1.1
CHD8-207ENST00000554384 LMNB2Q03252 620 aa8.17□□□□□ -1.1
CHD8-207ENST00000554384 PWP1Q13610 501 aa8.17□□□□□ -1.1
CHD8-207ENST00000554384 SNAP47Q5SQN1 464 aa8.17□□□□□ -1.1
CHD8-207ENST00000554384 FAM117BQ6P1L5 589 aa8.17□□□□□ -1.1
CHD8-207ENST00000554384 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.17□□□□□ -1.1
CHD8-207ENST00000554384 CD163Q86VB7 1156 aa8.17□□□□□ -1.1
CHD8-207ENST00000554384 KCNB2Q92953 911 aa8.17□□□□□ -1.1
CHD8-207ENST00000554384 GREM1O60565 184 aa8.16□□□□□ -1.1
CHD8-207ENST00000554384 GSTP1P09211 210 aaKnown RBP8.16□□□□□ -1.1
CHD8-207ENST00000554384 CHRNA4P43681 627 aa8.16□□□□□ -1.1
CHD8-207ENST00000554384 ZNF252P-AS1Q0IIN9 211 aa8.16□□□□□ -1.1
CHD8-207ENST00000554384 FOXD4L6Q3SYB3 417 aaPredicted RBP8.16□□□□□ -1.1
CHD8-207ENST00000554384 LLGL2Q6P1M3 1020 aa8.16□□□□□ -1.1
CHD8-207ENST00000554384 FOXD4L3Q6VB84 417 aaPredicted RBP8.16□□□□□ -1.1
CHD8-207ENST00000554384 WDR89Q96FK6 387 aaPredicted RBP8.16□□□□□ -1.1
CHD8-207ENST00000554384 USP26Q9BXU7 913 aa8.16□□□□□ -1.1
CHD8-207ENST00000554384 CCDC86Q9H6F5 360 aaKnown RBP8.16□□□□□ -1.1
CHD8-207ENST00000554384 ARL4DP49703 201 aa8.15□□□□□ -1.1
CHD8-207ENST00000554384 RPS26P62854 115 aaKnown RBP8.15□□□□□ -1.1
CHD8-207ENST00000554384 POU4F3Q15319 338 aa8.15□□□□□ -1.1
CHD8-207ENST00000554384 GAL3ST3Q96A11 431 aa8.15□□□□□ -1.1
CHD8-207ENST00000554384 GPRASP2Q96D09 838 aa8.15□□□□□ -1.1
CHD8-207ENST00000554384 PLVAPQ9BX97 442 aa8.15□□□□□ -1.1
CHD8-207ENST00000554384 SOX17Q9H6I2 414 aaPredicted RBP8.15□□□□□ -1.1
CHD8-207ENST00000554384 OSGEPQ9NPF4 335 aa8.15□□□□□ -1.1
CHD8-207ENST00000554384 SAMM50Q9Y512 469 aa8.15□□□□□ -1.1
CHD8-207ENST00000554384 A0A0A0MRY4 1105 aa8.14□□□□□ -1.11
CHD8-207ENST00000554384 LIG1P18858 919 aa8.14□□□□□ -1.11
CHD8-207ENST00000554384 LMNB1P20700 586 aa8.14□□□□□ -1.11
CHD8-207ENST00000554384 GJA8P48165 433 aa8.14□□□□□ -1.11
CHD8-207ENST00000554384 TRIM42Q8IWZ5 723 aa8.14□□□□□ -1.11
CHD8-207ENST00000554384 SLC43A3Q8NBI5 491 aa8.14□□□□□ -1.11
CHD8-207ENST00000554384 DDX54Q8TDD1 881 aaKnown RBP8.14□□□□□ -1.11
CHD8-207ENST00000554384 UBASH3BQ8TF42 649 aa8.14□□□□□ -1.11
CHD8-207ENST00000554384 SREK1Q8WXA9 508 aaKnown RBP8.14□□□□□ -1.11
CHD8-207ENST00000554384 WNT8BQ93098 351 aa8.14□□□□□ -1.11
CHD8-207ENST00000554384 TANGO6Q9C0B7 1094 aa8.14□□□□□ -1.11
CHD8-207ENST00000554384 MIR1-1HGQ9H1L0 117 aa8.14□□□□□ -1.11
CHD8-207ENST00000554384 KCNQ5Q9NR82 932 aa8.14□□□□□ -1.11
CHD8-207ENST00000554384 PRKAG2Q9UGJ0 569 aa8.14□□□□□ -1.11
CHD8-207ENST00000554384 CYP8B1Q9UNU6 501 aa8.14□□□□□ -1.11
CHD8-207ENST00000554384 FAM221AA4D161 298 aa8.13□□□□□ -1.11
CHD8-207ENST00000554384 ZNF862O60290 1169 aa8.13□□□□□ -1.11
CHD8-207ENST00000554384 WISP1O95388 367 aa8.13□□□□□ -1.11
CHD8-207ENST00000554384 SELPP16109 830 aa8.13□□□□□ -1.11
CHD8-207ENST00000554384 ITGB7P26010 798 aa8.13□□□□□ -1.11
CHD8-207ENST00000554384 CD68P34810 354 aaPredicted RBP8.13□□□□□ -1.11
CHD8-207ENST00000554384 AP3B2Q13367 1082 aa8.13□□□□□ -1.11
CHD8-207ENST00000554384 LRRC14Q15048 493 aa8.13□□□□□ -1.11
CHD8-207ENST00000554384 Q8N3U1 123 aa8.13□□□□□ -1.11
CHD8-207ENST00000554384 GPBAR1Q8TDU6 330 aa8.13□□□□□ -1.11
CHD8-207ENST00000554384 CORO1BQ9BR76 489 aa8.13□□□□□ -1.11
CHD8-207ENST00000554384 EMILIN2Q9BXX0 1053 aa8.13□□□□□ -1.11
CHD8-207ENST00000554384 GINM1Q9NU53 330 aa8.13□□□□□ -1.11
CHD8-207ENST00000554384 SUPT16HQ9Y5B9 1047 aaKnown RBP8.13□□□□□ -1.11
CHD8-207ENST00000554384 LOC100289279A0A1B0GTE1 492 aa8.12□□□□□ -1.11
CHD8-207ENST00000554384 CYP11A1P05108 521 aa8.12□□□□□ -1.11
CHD8-207ENST00000554384 APOBRQ0VD83 1088 aa8.12□□□□□ -1.11
CHD8-207ENST00000554384 GNL2Q13823 731 aaKnown RBP8.12□□□□□ -1.11
CHD8-207ENST00000554384 SEZ6Q53EL9 994 aa8.12□□□□□ -1.11
CHD8-207ENST00000554384 FAM196AQ6ZSG2 479 aa8.12□□□□□ -1.11
CHD8-207ENST00000554384 KLHL23Q8NBE8 558 aa8.12□□□□□ -1.11
CHD8-207ENST00000554384 DHX38Q92620 1227 aaKnown RBP8.12□□□□□ -1.11
CHD8-207ENST00000554384 NT5C1AQ9BXI3 368 aa8.12□□□□□ -1.11
CHD8-207ENST00000554384 EFR3BQ9Y2G0 817 aa8.12□□□□□ -1.11
CHD8-207ENST00000554384 PIK3R2O00459 728 aa8.11□□□□□ -1.11
CHD8-207ENST00000554384 DLL1O00548 723 aa8.11□□□□□ -1.11
CHD8-207ENST00000554384 ATF4P18848 351 aaPredicted RBP8.11□□□□□ -1.11
CHD8-207ENST00000554384 NASPP49321 788 aaPredicted RBP8.11□□□□□ -1.11
CHD8-207ENST00000554384 ARID5AQ03989 594 aa8.11□□□□□ -1.11
CHD8-207ENST00000554384 PDE3AQ14432 1141 aa8.11□□□□□ -1.11
CHD8-207ENST00000554384 INPP5AQ14642 412 aa8.11□□□□□ -1.11
CHD8-207ENST00000554384 FBXO11Q86XK2 927 aa8.11□□□□□ -1.11
CHD8-207ENST00000554384 MCF2L2Q86YR7 1114 aa8.11□□□□□ -1.11
CHD8-207ENST00000554384 FMR1NBQ8N0W7 255 aaPredicted RBP8.11□□□□□ -1.11
CHD8-207ENST00000554384 GATAD2BQ8WXI9 593 aa8.11□□□□□ -1.11
CHD8-207ENST00000554384 DRC1Q96MC2 740 aa8.11□□□□□ -1.11
CHD8-207ENST00000554384 PCDHA4Q9UN74 947 aa8.11□□□□□ -1.11
CHD8-207ENST00000554384 RASGRP4Q8TDF6 673 aa8.1□□□□□ -1.11
CHD8-207ENST00000554384 ACSBG1Q96GR2 724 aa8.1□□□□□ -1.11
CHD8-207ENST00000554384 CACNA2D2Q9NY47 1150 aa8.1□□□□□ -1.11
CHD8-207ENST00000554384 CSADQ9Y600 493 aa8.1□□□□□ -1.11
CHD8-207ENST00000554384 CILPO75339 1184 aa8.09□□□□□ -1.11
CHD8-207ENST00000554384 TRIM37O94972 964 aa8.09□□□□□ -1.11
CHD8-207ENST00000554384 SHISA2Q6UWI4 295 aa8.09□□□□□ -1.11
CHD8-207ENST00000554384 NKD1Q969G9 470 aa8.09□□□□□ -1.11
CHD8-207ENST00000554384 GMLQ99445 158 aa8.09□□□□□ -1.11
CHD8-207ENST00000554384 BRMS1Q9HCU9 246 aa8.09□□□□□ -1.11
CHD8-207ENST00000554384 NOP53Q9NZM5 478 aaKnown RBP8.09□□□□□ -1.11
CHD8-207ENST00000554384 DCDC2CA8MYV0 355 aa8.08□□□□□ -1.12
CHD8-207ENST00000554384 FGRP09769 529 aa8.08□□□□□ -1.12
CHD8-207ENST00000554384 RAC1P63000 192 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms