RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 PLEKHF1Q96S99 279 aa17.37■□□□□ 0.37
ARHGEF40-202ENST00000553709 LGR6Q9HBX8 967 aa17.37■□□□□ 0.37
ARHGEF40-202ENST00000553709 TUBB4BP68371 445 aa17.36■□□□□ 0.37
ARHGEF40-202ENST00000553709 RILPL1Q5EBL4 403 aa17.36■□□□□ 0.37
ARHGEF40-202ENST00000553709 DTHD1Q6ZMT9 781 aa17.36■□□□□ 0.37
ARHGEF40-202ENST00000553709 NEXMIFQ5QGS0 1516 aa17.36■□□□□ 0.37
ARHGEF40-202ENST00000553709 F8W031 263 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF40-202ENST00000553709 FAM89AQ96GI7 184 aa17.36■□□□□ 0.37
ARHGEF40-202ENST00000553709 ABCC4O15439 1325 aa17.36■□□□□ 0.37
ARHGEF40-202ENST00000553709 HSPA4P34932 840 aa17.36■□□□□ 0.37
ARHGEF40-202ENST00000553709 FAM173BQ6P4H8 233 aa17.36■□□□□ 0.37
ARHGEF40-202ENST00000553709 TPTE2Q6XPS3 522 aa17.36■□□□□ 0.37
ARHGEF40-202ENST00000553709 SELENOOQ9BVL4 669 aa17.36■□□□□ 0.37
ARHGEF40-202ENST00000553709 DEPDC5O75140 1603 aa17.36■□□□□ 0.37
ARHGEF40-202ENST00000553709 GNA11P29992 359 aa17.36■□□□□ 0.37
ARHGEF40-202ENST00000553709 WDR78Q5VTH9 848 aa17.36■□□□□ 0.37
ARHGEF40-202ENST00000553709 SUCLG2Q96I99 432 aa17.36■□□□□ 0.37
ARHGEF40-202ENST00000553709 ZKSCAN3Q9BRR0 538 aa17.36■□□□□ 0.37
ARHGEF40-202ENST00000553709 LMBRD1Q9NUN5 540 aa17.36■□□□□ 0.37
ARHGEF40-202ENST00000553709 B4E1Z4 1266 aa17.35■□□□□ 0.37
ARHGEF40-202ENST00000553709 PLCG2P16885 1265 aa17.35■□□□□ 0.37
ARHGEF40-202ENST00000553709 ANO1Q5XXA6 986 aa17.35■□□□□ 0.37
ARHGEF40-202ENST00000553709 PLVAPQ9BX97 442 aa17.35■□□□□ 0.37
ARHGEF40-202ENST00000553709 VWDEQ8N2E2 1590 aa17.35■□□□□ 0.37
ARHGEF40-202ENST00000553709 CNGA4Q8IV77 575 aa17.35■□□□□ 0.37
ARHGEF40-202ENST00000553709 APPBP2Q92624 585 aa17.35■□□□□ 0.37
ARHGEF40-202ENST00000553709 GUCA1BQ9UMX6 200 aa17.35■□□□□ 0.37
ARHGEF40-202ENST00000553709 KRT13P13646 458 aa17.35■□□□□ 0.37
ARHGEF40-202ENST00000553709 ZNF569Q5MCW4 686 aa17.35■□□□□ 0.37
ARHGEF40-202ENST00000553709 CCDC94Q9BW85 323 aaPredicted RBP17.35■□□□□ 0.37
ARHGEF40-202ENST00000553709 KIAA1210Q9ULL0 1709 aa17.35■□□□□ 0.37
ARHGEF40-202ENST00000553709 CHMP4BP1P59074 171 aa17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 KBTBD3Q8NAB2 608 aa17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 NCOA5Q9HCD5 579 aaKnown RBP17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 LUC7L2Q9Y383 392 aaKnown RBP17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 TNNI2P48788 182 aa17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 BBXQ8WY36 941 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 ANKRD2Q9GZV1 360 aa17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 RRAGDQ9NQL2 400 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 IBSPP21815 317 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 UBE4AQ14139 1066 aa17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 SPECC1LQ69YQ0 1117 aa17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 LEO1Q8WVC0 666 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 XAGE2Q96GT9 111 aa17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 BAG1Q99933 345 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 ITGA6P23229 1130 aa17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 USP37Q86T82 979 aa17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 SMARCC2Q8TAQ2 1214 aa17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 TIGD1Q96MW7 591 aa17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 PUF60Q9UHX1 559 aaKnown RBP17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 ANGEL1Q9UNK9 670 aaKnown RBP17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 FSD2A1L4K1 749 aa17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 GIGYF2Q6Y7W6 1299 aaKnown RBP17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 FERMT2Q96AC1 680 aa17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 BICD1Q96G01 975 aa17.34■□□□□ 0.37
ARHGEF40-202ENST00000553709 DEXIO95424 95 aa17.33■□□□□ 0.37
ARHGEF40-202ENST00000553709 SLAIN2Q9P270 581 aa17.33■□□□□ 0.37
ARHGEF40-202ENST00000553709 TMEM94Q12767 1356 aa17.33■□□□□ 0.37
ARHGEF40-202ENST00000553709 VWA3AA6NCI4 1184 aa17.33■□□□□ 0.36
ARHGEF40-202ENST00000553709 TRMT2AQ8IZ69 625 aaKnown RBP17.33■□□□□ 0.36
ARHGEF40-202ENST00000553709 NEK11Q8NG66 645 aa17.33■□□□□ 0.36
ARHGEF40-202ENST00000553709 OPA1O60313 960 aa17.33■□□□□ 0.36
ARHGEF40-202ENST00000553709 GADD45BO75293 160 aaPredicted RBP17.33■□□□□ 0.36
ARHGEF40-202ENST00000553709 LDHBP07195 334 aaKnown RBP17.33■□□□□ 0.36
ARHGEF40-202ENST00000553709 ANKARQ7Z5J8 1434 aa17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 AKR1B15C9JRZ8 316 aaPredicted RBP17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 GCKRQ14397 625 aa17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 SLC52A2Q9HAB3 445 aa17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 KCNH3Q9ULD8 1083 aa17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 ZNF521Q96K83 1311 aa17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 GPAA1O43292 621 aa17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 PRPHP41219 470 aa17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 ARID5AQ03989 594 aa17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 PUM3Q15397 648 aaKnown RBP17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 CCDC155Q8N6L0 562 aa17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 PIK3C2BO00750 1634 aa17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 IVLP07476 585 aa17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 GSPT1P15170 499 aaKnown RBP17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 ZNF174Q15697 407 aa17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 LMBR1Q8WVP7 490 aa17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 DENND2AQ9ULE3 1009 aa17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 BRD1O95696 1058 aa17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 CBX8Q9HC52 389 aa17.32■□□□□ 0.36
ARHGEF40-202ENST00000553709 CAPZA3Q96KX2 299 aa17.31■□□□□ 0.36
ARHGEF40-202ENST00000553709 TM6SF1Q9BZW5 370 aa17.31■□□□□ 0.36
ARHGEF40-202ENST00000553709 SPDYE3A6NKU9 549 aa17.31■□□□□ 0.36
ARHGEF40-202ENST00000553709 EIF4A1P60842 406 aaKnown RBP17.31■□□□□ 0.36
ARHGEF40-202ENST00000553709 NRXN1Q9ULB1 1477 aa17.31■□□□□ 0.36
ARHGEF40-202ENST00000553709 ZNF75DP51815 510 aa17.31■□□□□ 0.36
ARHGEF40-202ENST00000553709 ZNF594Q96JF6 807 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF40-202ENST00000553709 NSFL1CQ9UNZ2 370 aaKnown RBP17.31■□□□□ 0.36
ARHGEF40-202ENST00000553709 CDC37L1Q7L3B6 337 aa17.31■□□□□ 0.36
ARHGEF40-202ENST00000553709 PLIN2Q99541 437 aa17.31■□□□□ 0.36
ARHGEF40-202ENST00000553709 TUBBP07437 444 aa17.3■□□□□ 0.36
ARHGEF40-202ENST00000553709 LMTK3Q96Q04 1460 aa17.3■□□□□ 0.36
ARHGEF40-202ENST00000553709 CDK12Q9NYV4 1490 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF40-202ENST00000553709 TTLL12Q14166 644 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF40-202ENST00000553709 DNAJC5Q9H3Z4 198 aa17.3■□□□□ 0.36
ARHGEF40-202ENST00000553709 ARMT1Q9H993 441 aa17.3■□□□□ 0.36
ARHGEF40-202ENST00000553709 RASAL2Q9UJF2 1139 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms