RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 CREBRFQ8IUR6 639 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 BSDC1Q9NW68 430 aaPredicted RBP4.78□□□□□ -1.64
RDH11-204ENST00000553578 RCAN3Q9UKA8 241 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 RGPD5Q99666 1765 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 C1orf167Q5SNV9 1468 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 LTBP4Q8N2S1 1624 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 GIGYF1O75420 1035 aaPredicted RBP4.78□□□□□ -1.64
RDH11-204ENST00000553578 CAPN2P17655 700 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 ODR4Q5SWX8 454 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 SASS6Q6UVJ0 657 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 TRIM67Q6ZTA4 783 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 SH3BP5LQ7L8J4 393 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 NOL10Q9BSC4 688 aaKnown RBP4.78□□□□□ -1.64
RDH11-204ENST00000553578 CHMP3Q9Y3E7 222 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.78□□□□□ -1.64
RDH11-204ENST00000553578 NWD2Q9ULI1 1742 aa4.78□□□□□ -1.64
RDH11-204ENST00000553578 NUP188Q5SRE5 1749 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 GOLGA6L6A8MZA4 724 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 PPP2R5AQ15172 486 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 ERFEQ4G0M1 354 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 LSM14AQ8ND56 463 aaKnown RBP4.77□□□□□ -1.65
RDH11-204ENST00000553578 RPS6KL1Q9Y6S9 549 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 SORBS3O60504 671 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 ZNF76P36508 570 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 DPYDQ12882 1025 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 ATP2B3Q16720 1220 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 RINLQ6ZS11 566 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 FMNL3Q8IVF7 1028 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 GJD4Q96KN9 370 aaPredicted RBP4.77□□□□□ -1.65
RDH11-204ENST00000553578 TOR4AQ9NXH8 423 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.77□□□□□ -1.65
RDH11-204ENST00000553578 SEPT3Q9UH03 358 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 FLT4P35916 1363 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 H0YHG0 523 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 J3QL48 77 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 SARNPP82979 210 aaKnown RBP4.77□□□□□ -1.65
RDH11-204ENST00000553578 NR1H3Q13133 447 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 FNBP4Q8N3X1 1017 aaPredicted RBP4.77□□□□□ -1.65
RDH11-204ENST00000553578 PDCL2Q8N4E4 241 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 GOLGA6L1Q8N7Z2 621 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 TSPAN18Q96SJ8 248 aa4.77□□□□□ -1.65
RDH11-204ENST00000553578 MAFBQ9Y5Q3 323 aaPredicted RBP4.77□□□□□ -1.65
RDH11-204ENST00000553578 C5P01031 1676 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 KIF16BQ96L93 1317 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 MTHFSP49914 203 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 ARID5AQ03989 594 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 SLC26A8Q96RN1 970 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.76□□□□□ -1.65
RDH11-204ENST00000553578 ST7Q9NRC1 585 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 EID1Q9Y6B2 187 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 USP17L3A6NCW0 530 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 USP17L4A6NCW7 530 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 LDHBP07195 334 aaKnown RBP4.76□□□□□ -1.65
RDH11-204ENST00000553578 ATF3P18847 181 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 CTR9Q6PD62 1173 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 USP17L2Q6R6M4 530 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 USP17L1Q7RTZ2 530 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 MORC1Q86VD1 984 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 CKAP2LQ8IYA6 745 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 RNF34Q969K3 372 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 CABP1Q9NZU7 370 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 FEZ2Q9UHY8 353 aaPredicted RBP4.76□□□□□ -1.65
RDH11-204ENST00000553578 FAM86C2PA6NEL3 165 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 USP17L5A8MUK1 530 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 AXIN1O15169 862 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 CREB3O43889 395 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 FSHRP23945 695 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 NR5A1Q13285 461 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 NBPF10Q6P3W6 841 aaKnown RBP4.76□□□□□ -1.65
RDH11-204ENST00000553578 TRAF7Q6Q0C0 670 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 ZCRB1Q8TBF4 217 aaKnown RBP4.76□□□□□ -1.65
RDH11-204ENST00000553578 CFAP53Q96M91 514 aa4.76□□□□□ -1.65
RDH11-204ENST00000553578 COL16A1Q07092 1604 aaPredicted RBP4.76□□□□□ -1.65
RDH11-204ENST00000553578 COL14A1Q05707 1796 aaKnown RBP4.76□□□□□ -1.65
RDH11-204ENST00000553578 ADH1CP00326 375 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 NNTQ13423 1086 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 ICE2Q659A1 982 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 SH3RF1Q7Z6J0 888 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 OGFOD1Q8N543 542 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 NGLY1Q96IV0 654 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 DUSP9Q99956 384 aaKnown RBP4.75□□□□□ -1.65
RDH11-204ENST00000553578 UBA5Q9GZZ9 404 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 DEF6Q9H4E7 631 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 IFT57Q9NWB7 429 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 CHPF2Q9P2E5 772 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 SIAH2O43255 324 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 NDUFB5O43674 189 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 FBXO45P0C2W1 286 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 TMPOP42166 694 aaKnown RBP4.75□□□□□ -1.65
RDH11-204ENST00000553578 DHX9Q08211 1270 aaKnown RBP4.75□□□□□ -1.65
RDH11-204ENST00000553578 MAP3K11Q16584 847 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 C4orf48Q5BLP8 95 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 ANKRD23Q86SG2 305 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 MNS1Q8NEH6 495 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 RASSF4Q9H2L5 321 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 COL15A1P39059 1388 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 MSH6P52701 1360 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 RARSP54136 660 aaKnown RBP4.75□□□□□ -1.65
RDH11-204ENST00000553578 MFSD4BQ5TF39 518 aa4.75□□□□□ -1.65
RDH11-204ENST00000553578 TXNDC2Q86VQ3 553 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms