RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 SH3TC1Q8TE82 1336 aa12.98□□□□□ -0.33
SYNE2-208ENST00000553289 A0A1B0GVL5 298 aa12.98□□□□□ -0.33
SYNE2-208ENST00000553289 PDE8AO60658 829 aa12.98□□□□□ -0.33
SYNE2-208ENST00000553289 KARSQ15046 597 aaKnown RBP12.98□□□□□ -0.33
SYNE2-208ENST00000553289 G2E3Q7L622 706 aa12.98□□□□□ -0.33
SYNE2-208ENST00000553289 KCNH3Q9ULD8 1083 aa12.98□□□□□ -0.33
SYNE2-208ENST00000553289 V9GYY5 206 aaPredicted RBP12.98□□□□□ -0.33
SYNE2-208ENST00000553289 EIF4G3O43432 1585 aaKnown RBP12.98□□□□□ -0.33
SYNE2-208ENST00000553289 CAPN2P17655 700 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 GSTA5Q7RTV2 222 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 KBTBD3Q8NAB2 608 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 HELBQ8NG08 1087 aaPredicted RBP12.97□□□□□ -0.33
SYNE2-208ENST00000553289 VWA3AA6NCI4 1184 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 EBAG9O00559 213 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 ATP2A2P16615 1042 aaKnown RBP12.97□□□□□ -0.33
SYNE2-208ENST00000553289 TCHPQ9BT92 498 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 NUP58Q9BVL2 599 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 TM6SF1Q9BZW5 370 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 OGFRQ9NZT2 677 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 NSFL1CQ9UNZ2 370 aaKnown RBP12.97□□□□□ -0.33
SYNE2-208ENST00000553289 ARHGEF10O15013 1369 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 ARID5AQ03989 594 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 CCDC122Q5T0U0 273 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 RBM17Q96I25 401 aaKnown RBP12.97□□□□□ -0.33
SYNE2-208ENST00000553289 EPB41P11171 864 aaKnown RBP12.97□□□□□ -0.33
SYNE2-208ENST00000553289 HAUS3Q68CZ6 603 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 RSPH14Q9UHP6 348 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 TRIM35Q9UPQ4 493 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 SSX2IPQ9Y2D8 614 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 ATP6V0A2Q9Y487 856 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 SSH2Q76I76 1423 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 ITGA6P23229 1130 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 MNAT1P51948 309 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 TICAM2Q86XR7 235 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 FRMD4BQ9Y2L6 1034 aa12.97□□□□□ -0.33
SYNE2-208ENST00000553289 MAST3O60307 1309 aa12.96□□□□□ -0.33
SYNE2-208ENST00000553289 CYP26C1Q6V0L0 522 aa12.96□□□□□ -0.33
SYNE2-208ENST00000553289 SPATA24Q86W54 205 aa12.96□□□□□ -0.33
SYNE2-208ENST00000553289 TMEM87AQ8NBN3 555 aa12.96□□□□□ -0.33
SYNE2-208ENST00000553289 CCDC26Q8TAB7 109 aa12.96□□□□□ -0.33
SYNE2-208ENST00000553289 KIAA1524Q8TCG1 905 aa12.96□□□□□ -0.33
SYNE2-208ENST00000553289 EEF2P13639 858 aaKnown RBP12.96□□□□□ -0.33
SYNE2-208ENST00000553289 CCDC121Q6ZUS5 278 aa12.96□□□□□ -0.33
SYNE2-208ENST00000553289 NOC4LQ9BVI4 516 aaKnown RBP12.96□□□□□ -0.33
SYNE2-208ENST00000553289 B4E1Z4 1266 aa12.96□□□□□ -0.34
SYNE2-208ENST00000553289 CALCOCO2Q13137 446 aa12.96□□□□□ -0.34
SYNE2-208ENST00000553289 IGSF22Q8N9C0 903 aa12.96□□□□□ -0.34
SYNE2-208ENST00000553289 TRERF1Q96PN7 1200 aa12.96□□□□□ -0.34
SYNE2-208ENST00000553289 PARP3Q9Y6F1 533 aa12.96□□□□□ -0.34
SYNE2-208ENST00000553289 MSL1Q68DK7 614 aa12.96□□□□□ -0.34
SYNE2-208ENST00000553289 XAGE2Q96GT9 111 aa12.96□□□□□ -0.34
SYNE2-208ENST00000553289 LZTS2Q9BRK4 669 aa12.96□□□□□ -0.34
SYNE2-208ENST00000553289 ABCC2Q92887 1545 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 A6NNZ2 444 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 ZNF174Q15697 407 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 TUBB8Q3ZCM7 444 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 SEL1L2Q5TEA6 688 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 APBB1IPQ7Z5R6 666 aaPredicted RBP12.95□□□□□ -0.34
SYNE2-208ENST00000553289 CAPZA3Q96KX2 299 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 DBNDD2Q9BQY9 259 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 RNF123Q5XPI4 1314 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 TBC1D8BQ0IIM8 1120 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 CFAP58Q5T655 872 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 NAPGQ99747 312 aaPredicted RBP12.95□□□□□ -0.34
SYNE2-208ENST00000553289 CSRNP2Q9H175 543 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 IBTKQ9P2D0 1353 aaPredicted RBP12.95□□□□□ -0.34
SYNE2-208ENST00000553289 RXRAP19793 462 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 HIBADHP31937 336 aaKnown RBP12.95□□□□□ -0.34
SYNE2-208ENST00000553289 TEX11Q8IYF3 940 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 RGS22Q8NE09 1264 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 IQCDQ96DY2 449 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 RBSNQ9H1K0 784 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 TRAF5O00463 557 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 GPAA1O43292 621 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 CCDC6Q16204 474 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 LETM2Q2VYF4 491 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 CCDC50Q8IVM0 306 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 KIFAP3Q92845 792 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 CTNND2Q9UQB3 1225 aa12.95□□□□□ -0.34
SYNE2-208ENST00000553289 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.95□□□□□ -0.34
SYNE2-208ENST00000553289 ATP5DP30049 168 aa12.94□□□□□ -0.34
SYNE2-208ENST00000553289 NLRP12P59046 1061 aa12.94□□□□□ -0.34
SYNE2-208ENST00000553289 FAM76AQ8TAV0 307 aa12.94□□□□□ -0.34
SYNE2-208ENST00000553289 LPIN2Q92539 896 aa12.94□□□□□ -0.34
SYNE2-208ENST00000553289 SMC6Q96SB8 1091 aa12.94□□□□□ -0.34
SYNE2-208ENST00000553289 DSCC1Q9BVC3 393 aa12.94□□□□□ -0.34
SYNE2-208ENST00000553289 SLC52A2Q9HAB3 445 aa12.94□□□□□ -0.34
SYNE2-208ENST00000553289 KCNA6P17658 529 aa12.94□□□□□ -0.34
SYNE2-208ENST00000553289 TIMM10P62072 90 aa12.94□□□□□ -0.34
SYNE2-208ENST00000553289 PPP2R3AQ06190 1150 aa12.94□□□□□ -0.34
SYNE2-208ENST00000553289 PDE4DQ08499 809 aa12.94□□□□□ -0.34
SYNE2-208ENST00000553289 PLCB3Q01970 1234 aa12.94□□□□□ -0.34
SYNE2-208ENST00000553289 WDR66Q8TBY9 1149 aa12.94□□□□□ -0.34
SYNE2-208ENST00000553289 LEO1Q8WVC0 666 aaPredicted RBP12.94□□□□□ -0.34
SYNE2-208ENST00000553289 VPS18Q9P253 973 aa12.94□□□□□ -0.34
SYNE2-208ENST00000553289 USP19O94966 1318 aa12.94□□□□□ -0.34
SYNE2-208ENST00000553289 SYNRGQ9UMZ2 1314 aa12.94□□□□□ -0.34
SYNE2-208ENST00000553289 KRT25Q7Z3Z0 450 aa12.94□□□□□ -0.34
SYNE2-208ENST00000553289 DIS3L2Q8IYB7 885 aaKnown RBP12.94□□□□□ -0.34
SYNE2-208ENST00000553289 CABLES1Q8TDN4 633 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms