RNA–Protein interactions for RNA: ENST00000551245.5

TROAP-215, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 2,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-215ENST00000551245 GTF3C6Q969F1 213 aa13.74□□□□□ -0.21
TROAP-215ENST00000551245 ANAPC4Q9UJX5 808 aa13.74□□□□□ -0.21
TROAP-215ENST00000551245 KIF13BQ9NQT8 1826 aa13.74□□□□□ -0.21
TROAP-215ENST00000551245 FAM205AQ6ZU69 1335 aa13.74□□□□□ -0.21
TROAP-215ENST00000551245 SLX4Q8IY92 1834 aa13.74□□□□□ -0.21
TROAP-215ENST00000551245 H0YIN7 160 aa13.74□□□□□ -0.21
TROAP-215ENST00000551245 PFKFB2O60825 505 aa13.74□□□□□ -0.21
TROAP-215ENST00000551245 PRDX5P30044 214 aa13.74□□□□□ -0.21
TROAP-215ENST00000551245 RALYLQ86SE5 291 aaKnown RBP13.74□□□□□ -0.21
TROAP-215ENST00000551245 SLC16A10Q8TF71 515 aa13.74□□□□□ -0.21
TROAP-215ENST00000551245 BRF1Q92994 677 aa13.74□□□□□ -0.21
TROAP-215ENST00000551245 ZNF274Q96GC6 653 aaPredicted RBP13.74□□□□□ -0.21
TROAP-215ENST00000551245 MYH2Q9UKX2 1941 aa13.74□□□□□ -0.21
TROAP-215ENST00000551245 GSTO1P78417 241 aa13.73□□□□□ -0.21
TROAP-215ENST00000551245 TRDNQ13061 729 aa13.73□□□□□ -0.21
TROAP-215ENST00000551245 DEFB132Q7Z7B7 95 aa13.73□□□□□ -0.21
TROAP-215ENST00000551245 MPNDQ8N594 471 aa13.73□□□□□ -0.21
TROAP-215ENST00000551245 NECAB1Q8N987 351 aa13.73□□□□□ -0.21
TROAP-215ENST00000551245 CHMP4CQ96CF2 233 aa13.73□□□□□ -0.21
TROAP-215ENST00000551245 GPR101Q96P66 508 aaPredicted RBP13.73□□□□□ -0.21
TROAP-215ENST00000551245 WDR33Q9C0J8 1336 aaKnown RBP13.73□□□□□ -0.21
TROAP-215ENST00000551245 BAG4O95429 457 aaKnown RBP13.73□□□□□ -0.21
TROAP-215ENST00000551245 LDHBP07195 334 aaKnown RBP13.73□□□□□ -0.21
TROAP-215ENST00000551245 ANTXR2P58335 489 aa13.73□□□□□ -0.21
TROAP-215ENST00000551245 STAG1Q8WVM7 1258 aa13.73□□□□□ -0.21
TROAP-215ENST00000551245 LLPHQ9BRT6 129 aaKnown RBP13.73□□□□□ -0.21
TROAP-215ENST00000551245 COA1Q9GZY4 146 aa13.73□□□□□ -0.21
TROAP-215ENST00000551245 CNNM2Q9H8M5 875 aa13.73□□□□□ -0.21
TROAP-215ENST00000551245 BAZ2AQ9UIF9 1905 aaKnown RBP13.73□□□□□ -0.21
TROAP-215ENST00000551245 C10orf71Q711Q0 1435 aa13.73□□□□□ -0.21
TROAP-215ENST00000551245 GOLGA6L22H0YM25 854 aa13.72□□□□□ -0.21
TROAP-215ENST00000551245 PRC1O43663 620 aa13.72□□□□□ -0.21
TROAP-215ENST00000551245 C6orf229H3BNL8 230 aa13.72□□□□□ -0.21
TROAP-215ENST00000551245 GJB2P29033 226 aa13.72□□□□□ -0.21
TROAP-215ENST00000551245 TDO2P48775 406 aa13.72□□□□□ -0.21
TROAP-215ENST00000551245 FGD1P98174 961 aa13.72□□□□□ -0.21
TROAP-215ENST00000551245 AKNAD1Q5T1N1 836 aa13.72□□□□□ -0.21
TROAP-215ENST00000551245 TBC1D22AQ8WUA7 517 aa13.72□□□□□ -0.21
TROAP-215ENST00000551245 LRRC2Q9BYS8 371 aa13.72□□□□□ -0.21
TROAP-215ENST00000551245 CDK5RAP2Q96SN8 1893 aa13.72□□□□□ -0.21
TROAP-215ENST00000551245 DYNLL1P63167 89 aaKnown RBP13.71□□□□□ -0.21
TROAP-215ENST00000551245 DZIP1Q86YF9 867 aaKnown RBP13.71□□□□□ -0.21
TROAP-215ENST00000551245 CERS3Q8IU89 383 aa13.71□□□□□ -0.21
TROAP-215ENST00000551245 CNKSR1Q969H4 720 aa13.71□□□□□ -0.21
TROAP-215ENST00000551245 MTA3Q9BTC8 594 aa13.71□□□□□ -0.21
TROAP-215ENST00000551245 TMX4Q9H1E5 349 aaPredicted RBP13.71□□□□□ -0.21
TROAP-215ENST00000551245 DDX49Q9Y6V7 483 aaKnown RBP13.71□□□□□ -0.21
TROAP-215ENST00000551245 LDHCP07864 332 aa13.71□□□□□ -0.21
TROAP-215ENST00000551245 NASPP49321 788 aaPredicted RBP13.71□□□□□ -0.21
TROAP-215ENST00000551245 PPP4CP60510 307 aa13.71□□□□□ -0.21
TROAP-215ENST00000551245 CCDC173Q0VFZ6 552 aa13.71□□□□□ -0.21
TROAP-215ENST00000551245 DPP8Q6V1X1 898 aaPredicted RBP13.71□□□□□ -0.21
TROAP-215ENST00000551245 KRT23Q9C075 422 aa13.71□□□□□ -0.21
TROAP-215ENST00000551245 ATP8A2Q9NTI2 1148 aa13.71□□□□□ -0.21
TROAP-215ENST00000551245 PCP11498 1178 aaKnown RBP13.71□□□□□ -0.22
TROAP-215ENST00000551245 SYT1P21579 422 aa13.71□□□□□ -0.22
TROAP-215ENST00000551245 APOBRQ0VD83 1088 aa13.71□□□□□ -0.22
TROAP-215ENST00000551245 TMEM87BQ96K49 555 aa13.71□□□□□ -0.22
TROAP-215ENST00000551245 CRNKL1Q9BZJ0 848 aaKnown RBP13.71□□□□□ -0.22
TROAP-215ENST00000551245 RNF41Q9H4P4 317 aaPredicted RBP13.71□□□□□ -0.22
TROAP-215ENST00000551245 NEDD4P46934 1319 aa13.7□□□□□ -0.22
TROAP-215ENST00000551245 PDIA3P30101 505 aaKnown RBP13.7□□□□□ -0.22
TROAP-215ENST00000551245 PPARAQ07869 468 aa13.7□□□□□ -0.22
TROAP-215ENST00000551245 SMARCC2Q8TAQ2 1214 aa13.7□□□□□ -0.22
TROAP-215ENST00000551245 ANP32BQ92688 251 aaKnown RBP13.7□□□□□ -0.22
TROAP-215ENST00000551245 ZNF622Q969S3 477 aaKnown RBP eCLIP13.7□□□□□ -0.22
TROAP-215ENST00000551245 FAM163AQ96GL9 167 aaPredicted RBP13.7□□□□□ -0.22
TROAP-215ENST00000551245 PPP1R9BQ96SB3 815 aa13.7□□□□□ -0.22
TROAP-215ENST00000551245 RTFDC1Q9BY42 306 aaPredicted RBP13.7□□□□□ -0.22
TROAP-215ENST00000551245 SUGT1Q9Y2Z0 365 aa13.7□□□□□ -0.22
TROAP-215ENST00000551245 ZNF646O15015 1829 aaPredicted RBP13.7□□□□□ -0.22
TROAP-215ENST00000551245 SNED1Q8TER0 1413 aa13.7□□□□□ -0.22
TROAP-215ENST00000551245 FOCADQ5VW36 1801 aa13.7□□□□□ -0.22
TROAP-215ENST00000551245 STX6O43752 255 aa13.7□□□□□ -0.22
TROAP-215ENST00000551245 FGRP09769 529 aa13.7□□□□□ -0.22
TROAP-215ENST00000551245 PDCP20941 246 aa13.7□□□□□ -0.22
TROAP-215ENST00000551245 SCRN1Q12765 414 aa13.7□□□□□ -0.22
TROAP-215ENST00000551245 MFSD6Q6ZSS7 791 aa13.7□□□□□ -0.22
TROAP-215ENST00000551245 CYB5R4Q7L1T6 521 aa13.7□□□□□ -0.22
TROAP-215ENST00000551245 SDR42E1Q8WUS8 393 aa13.7□□□□□ -0.22
TROAP-215ENST00000551245 EYA3Q99504 573 aa13.7□□□□□ -0.22
TROAP-215ENST00000551245 ZC3H12CQ9C0D7 883 aaKnown RBP13.7□□□□□ -0.22
TROAP-215ENST00000551245 TACC3Q9Y6A5 838 aa13.7□□□□□ -0.22
TROAP-215ENST00000551245 ZSCAN22P10073 491 aaPredicted RBP13.69□□□□□ -0.22
TROAP-215ENST00000551245 CTDSPL2Q05D32 466 aa13.69□□□□□ -0.22
TROAP-215ENST00000551245 KLHL40Q2TBA0 621 aa13.69□□□□□ -0.22
TROAP-215ENST00000551245 SBK1Q52WX2 424 aa13.69□□□□□ -0.22
TROAP-215ENST00000551245 CHST3Q7LGC8 479 aa13.69□□□□□ -0.22
TROAP-215ENST00000551245 C7orf43Q8WVR3 580 aa13.69□□□□□ -0.22
TROAP-215ENST00000551245 JAG2Q9Y219 1238 aa13.69□□□□□ -0.22
TROAP-215ENST00000551245 MROH7-TTC4A0A0A0MT08 1334 aa13.69□□□□□ -0.22
TROAP-215ENST00000551245 NAV1Q8NEY1 1877 aa13.69□□□□□ -0.22
TROAP-215ENST00000551245 SH2B2O14492 632 aaPredicted RBP13.69□□□□□ -0.22
TROAP-215ENST00000551245 GRIK5Q16478 980 aa13.69□□□□□ -0.22
TROAP-215ENST00000551245 CC2D2BQ6DHV5 1058 aa13.69□□□□□ -0.22
TROAP-215ENST00000551245 ZMYND15Q9H091 742 aa13.69□□□□□ -0.22
TROAP-215ENST00000551245 AATFQ9NY61 560 aaKnown RBP eCLIP13.69□□□□□ -0.22
TROAP-215ENST00000551245 ANGEL1Q9UNK9 670 aaKnown RBP13.69□□□□□ -0.22
TROAP-215ENST00000551245 B4E1Z4 1266 aa13.68□□□□□ -0.22
TROAP-215ENST00000551245 TPM2P07951 284 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms