RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 PPP4CP60510 307 aa25.47■■□□□ 1.67
CACNB3-210ENST00000548874 APPBP2Q92624 585 aa25.46■■□□□ 1.67
CACNB3-210ENST00000548874 PGAP2Q9UHJ9 254 aa25.46■■□□□ 1.67
CACNB3-210ENST00000548874 ECM29Q5VYK3 1845 aa25.46■■□□□ 1.67
CACNB3-210ENST00000548874 ASTN2O75129 1339 aaPredicted RBP25.45■■□□□ 1.66
CACNB3-210ENST00000548874 KIF3CO14782 793 aa25.45■■□□□ 1.66
CACNB3-210ENST00000548874 RHBDL3P58872 404 aa25.45■■□□□ 1.66
CACNB3-210ENST00000548874 SPDYE2Q495Y8 402 aa25.45■■□□□ 1.66
CACNB3-210ENST00000548874 ZMYM1Q5SVZ6 1142 aa25.45■■□□□ 1.66
CACNB3-210ENST00000548874 CDC42EP5Q6NZY7 148 aa25.45■■□□□ 1.66
CACNB3-210ENST00000548874 ZC3H15Q8WU90 426 aaKnown RBP25.45■■□□□ 1.66
CACNB3-210ENST00000548874 RIOK1Q9BRS2 568 aaKnown RBP25.45■■□□□ 1.66
CACNB3-210ENST00000548874 TDRD3Q9H7E2 651 aaKnown RBP25.45■■□□□ 1.66
CACNB3-210ENST00000548874 BAG3O95817 575 aa25.44■■□□□ 1.66
CACNB3-210ENST00000548874 POTEIP0CG38 1075 aa25.44■■□□□ 1.66
CACNB3-210ENST00000548874 POTEJP0CG39 1038 aa25.44■■□□□ 1.66
CACNB3-210ENST00000548874 EAPPQ56P03 285 aaPredicted RBP25.44■■□□□ 1.66
CACNB3-210ENST00000548874 MIGA1Q8NAN2 632 aa25.44■■□□□ 1.66
CACNB3-210ENST00000548874 AATFQ9NY61 560 aaKnown RBP eCLIP25.44■■□□□ 1.66
CACNB3-210ENST00000548874 MYO1BO43795 1136 aa25.43■■□□□ 1.66
CACNB3-210ENST00000548874 CERS3Q8IU89 383 aa25.43■■□□□ 1.66
CACNB3-210ENST00000548874 OSBP2Q969R2 916 aa25.43■■□□□ 1.66
CACNB3-210ENST00000548874 NOL10Q9BSC4 688 aaKnown RBP25.43■■□□□ 1.66
CACNB3-210ENST00000548874 PUS7LQ9H0K6 701 aaKnown RBP25.43■■□□□ 1.66
CACNB3-210ENST00000548874 ZNF70Q9UC06 446 aaPredicted RBP25.43■■□□□ 1.66
CACNB3-210ENST00000548874 HIP1O00291 1037 aa25.42■■□□□ 1.66
CACNB3-210ENST00000548874 DYNLL1P63167 89 aaKnown RBP25.42■■□□□ 1.66
CACNB3-210ENST00000548874 LDHDQ86WU2 507 aa25.42■■□□□ 1.66
CACNB3-210ENST00000548874 USP40Q9NVE5 1235 aa25.42■■□□□ 1.66
CACNB3-210ENST00000548874 GGA3Q9NZ52 723 aa25.42■■□□□ 1.66
CACNB3-210ENST00000548874 PITPNM2Q9BZ72 1349 aa25.41■■□□□ 1.66
CACNB3-210ENST00000548874 MAGEB6P1A0A0J9YX57 407 aa25.41■■□□□ 1.66
CACNB3-210ENST00000548874 CLRN2A0PK11 232 aa25.41■■□□□ 1.66
CACNB3-210ENST00000548874 PLCG2P16885 1265 aa25.41■■□□□ 1.66
CACNB3-210ENST00000548874 ANGEL2Q5VTE6 544 aaKnown RBP25.41■■□□□ 1.66
CACNB3-210ENST00000548874 A0A0D9SFI3 127 aa25.4■■□□□ 1.66
CACNB3-210ENST00000548874 NMIQ13287 307 aaPredicted RBP25.4■■□□□ 1.66
CACNB3-210ENST00000548874 SH3RF3Q8TEJ3 882 aaPredicted RBP25.4■■□□□ 1.66
CACNB3-210ENST00000548874 FAM227BQ96M60 508 aa25.4■■□□□ 1.66
CACNB3-210ENST00000548874 HELLSQ9NRZ9 838 aa25.4■■□□□ 1.66
CACNB3-210ENST00000548874 M0R2C6 588 aa25.39■■□□□ 1.66
CACNB3-210ENST00000548874 WDHD1O75717 1129 aaPredicted RBP25.39■■□□□ 1.66
CACNB3-210ENST00000548874 MBD4O95243 580 aa25.39■■□□□ 1.66
CACNB3-210ENST00000548874 CHMLP26374 656 aa25.39■■□□□ 1.66
CACNB3-210ENST00000548874 FKBP1CQ5VVH2 108 aa25.39■■□□□ 1.66
CACNB3-210ENST00000548874 LCORLQ8N3X6 602 aa25.39■■□□□ 1.66
CACNB3-210ENST00000548874 SEC62Q99442 399 aaKnown RBP25.39■■□□□ 1.66
CACNB3-210ENST00000548874 IDI2Q9BXS1 227 aa25.39■■□□□ 1.66
CACNB3-210ENST00000548874 DIAPH3Q9NSV4 1193 aa25.39■■□□□ 1.66
CACNB3-210ENST00000548874 CACNB3P54284 484 aa25.38■■□□□ 1.65
CACNB3-210ENST00000548874 ARMT1Q9H993 441 aa25.38■■□□□ 1.65
CACNB3-210ENST00000548874 TMOD2Q9NZR1 351 aa25.38■■□□□ 1.65
CACNB3-210ENST00000548874 APOBEC3FQ8IUX4 373 aaKnown RBP25.37■■□□□ 1.65
CACNB3-210ENST00000548874 TEX11Q8IYF3 940 aa25.37■■□□□ 1.65
CACNB3-210ENST00000548874 AIDAQ96BJ3 306 aa25.37■■□□□ 1.65
CACNB3-210ENST00000548874 DCPSQ96C86 337 aaKnown RBP25.37■■□□□ 1.65
CACNB3-210ENST00000548874 VEZTQ9HBM0 779 aa25.37■■□□□ 1.65
CACNB3-210ENST00000548874 CLEC11AQ9Y240 323 aa25.37■■□□□ 1.65
CACNB3-210ENST00000548874 GPAA1O43292 621 aa25.36■■□□□ 1.65
CACNB3-210ENST00000548874 NPM3O75607 178 aaKnown RBP25.36■■□□□ 1.65
CACNB3-210ENST00000548874 NFIAQ12857 509 aa25.36■■□□□ 1.65
CACNB3-210ENST00000548874 MCMDC2Q4G0Z9 681 aa25.36■■□□□ 1.65
CACNB3-210ENST00000548874 STRBPQ96SI9 672 aaKnown RBP25.36■■□□□ 1.65
CACNB3-210ENST00000548874 CDK5RAP2Q96SN8 1893 aa25.36■■□□□ 1.65
CACNB3-210ENST00000548874 CNTNAP1P78357 1384 aa25.35■■□□□ 1.65
CACNB3-210ENST00000548874 CWC27Q6UX04 472 aaKnown RBP25.35■■□□□ 1.65
CACNB3-210ENST00000548874 CRNKL1Q9BZJ0 848 aaKnown RBP25.35■■□□□ 1.65
CACNB3-210ENST00000548874 DDX4Q9NQI0 724 aaKnown RBP25.35■■□□□ 1.65
CACNB3-210ENST00000548874 FAM198AQ9UFP1 575 aa25.35■■□□□ 1.65
CACNB3-210ENST00000548874 FOCADQ5VW36 1801 aa25.35■■□□□ 1.65
CACNB3-210ENST00000548874 TCP10L2B9ZVM9 353 aa25.34■■□□□ 1.65
CACNB3-210ENST00000548874 CDC45O75419 566 aa25.34■■□□□ 1.65
CACNB3-210ENST00000548874 TNFAIP1Q13829 316 aa25.34■■□□□ 1.65
CACNB3-210ENST00000548874 MAP1SQ66K74 1059 aaPredicted RBP25.34■■□□□ 1.65
CACNB3-210ENST00000548874 CHADLQ6NUI6 762 aa25.34■■□□□ 1.65
CACNB3-210ENST00000548874 FAM83AQ86UY5 434 aa25.34■■□□□ 1.65
CACNB3-210ENST00000548874 ENTPD3O75355 529 aa25.33■■□□□ 1.65
CACNB3-210ENST00000548874 CCDC129Q6ZRS4 1044 aa25.33■■□□□ 1.65
CACNB3-210ENST00000548874 ZNF589Q86UQ0 364 aaPredicted RBP25.33■■□□□ 1.65
CACNB3-210ENST00000548874 SULF1Q8IWU6 871 aa25.33■■□□□ 1.65
CACNB3-210ENST00000548874 SCAF8Q9UPN6 1271 aaKnown RBP25.33■■□□□ 1.65
CACNB3-210ENST00000548874 RAD50Q92878 1312 aa25.33■■□□□ 1.64
CACNB3-210ENST00000548874 POLR2AP24928 1970 aaKnown RBP25.33■■□□□ 1.64
CACNB3-210ENST00000548874 PRKAB2O43741 272 aa25.32■■□□□ 1.64
CACNB3-210ENST00000548874 TOMM70O94826 608 aa25.32■■□□□ 1.64
CACNB3-210ENST00000548874 CDC37L1Q7L3B6 337 aa25.32■■□□□ 1.64
CACNB3-210ENST00000548874 KRT26Q7Z3Y9 468 aa25.32■■□□□ 1.64
CACNB3-210ENST00000548874 TGFBRAP1Q8WUH2 860 aa25.32■■□□□ 1.64
CACNB3-210ENST00000548874 DEFB129Q9H1M3 183 aa25.32■■□□□ 1.64
CACNB3-210ENST00000548874 IL25Q9H293 177 aa25.32■■□□□ 1.64
CACNB3-210ENST00000548874 MKRN1Q9UHC7 482 aaKnown RBP25.32■■□□□ 1.64
CACNB3-210ENST00000548874 PPP2R3BQ9Y5P8 575 aa25.32■■□□□ 1.64
CACNB3-210ENST00000548874 FLT1P17948 1338 aa25.32■■□□□ 1.64
CACNB3-210ENST00000548874 ADM5C9JUS6 153 aa25.31■■□□□ 1.64
CACNB3-210ENST00000548874 GNAT2P19087 354 aa25.31■■□□□ 1.64
CACNB3-210ENST00000548874 TNNI2P48788 182 aa25.31■■□□□ 1.64
CACNB3-210ENST00000548874 RASA3Q14644 834 aa25.31■■□□□ 1.64
CACNB3-210ENST00000548874 RBM46Q8TBY0 533 aaKnown RBP25.31■■□□□ 1.64
CACNB3-210ENST00000548874 FAM151AQ8WW52 585 aa25.31■■□□□ 1.64
CACNB3-210ENST00000548874 RUFY2Q8WXA3 655 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms