RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 PCCAP05165 728 aaPredicted RBP17.94■□□□□ 0.46
PTCH1-217ENST00000548420 HOXB7P09629 217 aa17.94■□□□□ 0.46
PTCH1-217ENST00000548420 RBM5P52756 815 aaKnown RBP eCLIP17.94■□□□□ 0.46
PTCH1-217ENST00000548420 GNAI1P63096 354 aa17.94■□□□□ 0.46
PTCH1-217ENST00000548420 TRIM32Q13049 653 aa17.94■□□□□ 0.46
PTCH1-217ENST00000548420 LRRC26Q2I0M4 334 aa17.94■□□□□ 0.46
PTCH1-217ENST00000548420 WWC1Q8IX03 1113 aa17.94■□□□□ 0.46
PTCH1-217ENST00000548420 DNAH12Q6ZR08 3092 aa17.94■□□□□ 0.46
PTCH1-217ENST00000548420 TNFAIP1Q13829 316 aa17.93■□□□□ 0.46
PTCH1-217ENST00000548420 GPAT2Q6NUI2 795 aa17.93■□□□□ 0.46
PTCH1-217ENST00000548420 WRNIP1Q96S55 665 aa17.93■□□□□ 0.46
PTCH1-217ENST00000548420 CDC5LQ99459 802 aaKnown RBP17.93■□□□□ 0.46
PTCH1-217ENST00000548420 GREM2Q9H772 168 aa17.93■□□□□ 0.46
PTCH1-217ENST00000548420 COL6A1P12109 1028 aa17.92■□□□□ 0.46
PTCH1-217ENST00000548420 TAOK2Q9UL54 1235 aa17.92■□□□□ 0.46
PTCH1-217ENST00000548420 OGDHLQ9ULD0 1010 aa17.92■□□□□ 0.46
PTCH1-217ENST00000548420 KCNH4Q9UQ05 1017 aa17.92■□□□□ 0.46
PTCH1-217ENST00000548420 ARIH1Q9Y4X5 557 aaPredicted RBP17.92■□□□□ 0.46
PTCH1-217ENST00000548420 PPATQ06203 517 aa17.91■□□□□ 0.46
PTCH1-217ENST00000548420 TTLL11Q8NHH1 800 aa17.91■□□□□ 0.46
PTCH1-217ENST00000548420 ADAMTS19Q8TE59 1207 aa17.91■□□□□ 0.46
PTCH1-217ENST00000548420 SHHQ15465 462 aa17.9■□□□□ 0.46
PTCH1-217ENST00000548420 C9orf50Q5SZB4 431 aa17.9■□□□□ 0.46
PTCH1-217ENST00000548420 ALYREFQ86V81 257 aaKnown RBP17.9■□□□□ 0.46
PTCH1-217ENST00000548420 IL16Q14005 1332 aa17.9■□□□□ 0.46
PTCH1-217ENST00000548420 MUC6Q6W4X9 2439 aa17.9■□□□□ 0.46
PTCH1-217ENST00000548420 TNPO2O14787 897 aaKnown RBP17.89■□□□□ 0.45
PTCH1-217ENST00000548420 HSP90B1P14625 803 aaKnown RBP17.89■□□□□ 0.45
PTCH1-217ENST00000548420 INPP5BP32019 993 aa17.89■□□□□ 0.45
PTCH1-217ENST00000548420 CTSWP56202 376 aa17.89■□□□□ 0.45
PTCH1-217ENST00000548420 FKBP1AP62942 108 aaKnown RBP17.89■□□□□ 0.45
PTCH1-217ENST00000548420 DUSP27Q5VZP5 1158 aa17.89■□□□□ 0.45
PTCH1-217ENST00000548420 FAM9BQ8IZU0 186 aa17.89■□□□□ 0.45
PTCH1-217ENST00000548420 PARK7Q99497 189 aaKnown RBP17.89■□□□□ 0.45
PTCH1-217ENST00000548420 DZIP1LQ8IYY4 767 aaKnown RBP17.88■□□□□ 0.45
PTCH1-217ENST00000548420 MYD88Q99836 296 aa17.88■□□□□ 0.45
PTCH1-217ENST00000548420 IL1R1P14778 569 aa17.87■□□□□ 0.45
PTCH1-217ENST00000548420 CACNB3P54284 484 aa17.87■□□□□ 0.45
PTCH1-217ENST00000548420 WDR63Q8IWG1 891 aa17.87■□□□□ 0.45
PTCH1-217ENST00000548420 CCDC191Q8NCU4 936 aa17.87■□□□□ 0.45
PTCH1-217ENST00000548420 UHRF1Q96T88 793 aaPredicted RBP17.87■□□□□ 0.45
PTCH1-217ENST00000548420 LTBP2Q14767 1821 aa17.86■□□□□ 0.45
PTCH1-217ENST00000548420 CCER2I3L3R5 266 aa17.86■□□□□ 0.45
PTCH1-217ENST00000548420 HDGFL1Q5TGJ6 251 aa17.86■□□□□ 0.45
PTCH1-217ENST00000548420 C8orf58Q8NAV2 365 aa17.86■□□□□ 0.45
PTCH1-217ENST00000548420 ASB2Q96Q27 587 aa17.86■□□□□ 0.45
PTCH1-217ENST00000548420 LRFN3Q9BTN0 628 aa17.86■□□□□ 0.45
PTCH1-217ENST00000548420 HMX1Q9NP08 348 aaPredicted RBP17.86■□□□□ 0.45
PTCH1-217ENST00000548420 CACNA1AO00555 2505 aa17.85■□□□□ 0.45
PTCH1-217ENST00000548420 MYH3P11055 1940 aa17.85■□□□□ 0.45
PTCH1-217ENST00000548420 GRIN2CQ14957 1233 aa17.85■□□□□ 0.45
PTCH1-217ENST00000548420 RIC3Q7Z5B4 369 aa17.85■□□□□ 0.45
PTCH1-217ENST00000548420 DBF4Q9UBU7 674 aaPredicted RBP17.85■□□□□ 0.45
PTCH1-217ENST00000548420 HMGCRP04035 888 aa17.84■□□□□ 0.45
PTCH1-217ENST00000548420 SMAD3P84022 425 aaKnown RBP17.84■□□□□ 0.45
PTCH1-217ENST00000548420 MIGA2Q7L4E1 593 aa17.84■□□□□ 0.45
PTCH1-217ENST00000548420 ATXN2LQ8WWM7 1075 aaKnown RBP17.84■□□□□ 0.45
PTCH1-217ENST00000548420 NECAB3Q96P71 396 aaPredicted RBP17.84■□□□□ 0.45
PTCH1-217ENST00000548420 LBHD1Q9BQE6 289 aaPredicted RBP17.84■□□□□ 0.45
PTCH1-217ENST00000548420 ANKRD2Q9GZV1 360 aa17.84■□□□□ 0.45
PTCH1-217ENST00000548420 SERPINA10Q9UK55 444 aa17.84■□□□□ 0.45
PTCH1-217ENST00000548420 TCF20Q9UGU0 1960 aaKnown RBP17.83■□□□□ 0.44
PTCH1-217ENST00000548420 TNNI2P48788 182 aa17.83■□□□□ 0.44
PTCH1-217ENST00000548420 CHRNDQ07001 517 aa17.83■□□□□ 0.44
PTCH1-217ENST00000548420 C15orf52Q6ZUT6 534 aaKnown RBP17.83■□□□□ 0.44
PTCH1-217ENST00000548420 C1QTNF1Q9BXJ1 281 aa17.83■□□□□ 0.44
PTCH1-217ENST00000548420 PHAXQ9H814 394 aaKnown RBP17.83■□□□□ 0.44
PTCH1-217ENST00000548420 CWC25Q9NXE8 425 aaPredicted RBP17.83■□□□□ 0.44
PTCH1-217ENST00000548420 TTF2Q9UNY4 1162 aaKnown RBP17.83■□□□□ 0.44
PTCH1-217ENST00000548420 MAST2Q6P0Q8 1798 aa17.82■□□□□ 0.44
PTCH1-217ENST00000548420 TAF5LO75529 589 aa17.82■□□□□ 0.44
PTCH1-217ENST00000548420 GRIK5Q16478 980 aa17.82■□□□□ 0.44
PTCH1-217ENST00000548420 TSPYL6Q8N831 410 aa17.82■□□□□ 0.44
PTCH1-217ENST00000548420 TSR2Q969E8 191 aaKnown RBP17.82■□□□□ 0.44
PTCH1-217ENST00000548420 HYPKQ9NX55 129 aa17.82■□□□□ 0.44
PTCH1-217ENST00000548420 GJD2Q9UKL4 321 aa17.82■□□□□ 0.44
PTCH1-217ENST00000548420 ZNF521Q96K83 1311 aa17.81■□□□□ 0.44
PTCH1-217ENST00000548420 ELL2O00472 640 aaPredicted RBP17.81■□□□□ 0.44
PTCH1-217ENST00000548420 CRKP46108 304 aa17.81■□□□□ 0.44
PTCH1-217ENST00000548420 CHMP4AQ9BY43 222 aa17.81■□□□□ 0.44
PTCH1-217ENST00000548420 HCN4Q9Y3Q4 1203 aa17.81■□□□□ 0.44
PTCH1-217ENST00000548420 PLXNB2O15031 1838 aa17.81■□□□□ 0.44
PTCH1-217ENST00000548420 IGHMBP2P38935 993 aaKnown RBP17.8■□□□□ 0.44
PTCH1-217ENST00000548420 KCNJ4P48050 445 aa17.8■□□□□ 0.44
PTCH1-217ENST00000548420 MAP3K21Q5TCX8 1036 aa17.8■□□□□ 0.44
PTCH1-217ENST00000548420 PPM1EQ8WY54 764 aa17.8■□□□□ 0.44
PTCH1-217ENST00000548420 TRIB2Q92519 343 aa17.8■□□□□ 0.44
PTCH1-217ENST00000548420 COA7Q96BR5 231 aa17.8■□□□□ 0.44
PTCH1-217ENST00000548420 EPHX3Q9H6B9 360 aa17.8■□□□□ 0.44
PTCH1-217ENST00000548420 ZNF112Q9UJU3 913 aa17.8■□□□□ 0.44
PTCH1-217ENST00000548420 SALL2Q9Y467 1007 aaPredicted RBP17.8■□□□□ 0.44
PTCH1-217ENST00000548420 AK9Q5TCS8 1911 aa17.8■□□□□ 0.44
PTCH1-217ENST00000548420 A0A1B0GUL6 1792 aa17.79■□□□□ 0.44
PTCH1-217ENST00000548420 LHX8Q68G74 356 aa17.79■□□□□ 0.44
PTCH1-217ENST00000548420 ZNF341Q9BYN7 854 aa17.79■□□□□ 0.44
PTCH1-217ENST00000548420 SPINK5Q9NQ38 1064 aaPredicted RBP17.79■□□□□ 0.44
PTCH1-217ENST00000548420 MFSD14BQ5SR56 506 aa17.78■□□□□ 0.44
PTCH1-217ENST00000548420 CCDC30Q5VVM6 783 aa17.78■□□□□ 0.44
PTCH1-217ENST00000548420 POTEEQ6S8J3 1075 aa17.78■□□□□ 0.44
PTCH1-217ENST00000548420 ANKRD13CQ8N6S4 541 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms