RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 TMEM87AQ8NBN3 555 aa13.83□□□□□ -0.2
RNF41-203ENST00000547967 ZKSCAN3Q9BRR0 538 aa13.83□□□□□ -0.2
RNF41-203ENST00000547967 CPLX1O14810 134 aa13.82□□□□□ -0.2
RNF41-203ENST00000547967 PDIA4P13667 645 aaKnown RBP13.82□□□□□ -0.2
RNF41-203ENST00000547967 ZNF445P59923 1031 aa13.82□□□□□ -0.2
RNF41-203ENST00000547967 KRT85P78386 507 aa13.82□□□□□ -0.2
RNF41-203ENST00000547967 HMGN5P82970 282 aaKnown RBP13.82□□□□□ -0.2
RNF41-203ENST00000547967 MECOMQ03112 1051 aa13.82□□□□□ -0.2
RNF41-203ENST00000547967 AKNAD1Q5T1N1 836 aa13.82□□□□□ -0.2
RNF41-203ENST00000547967 UBE2HP62256 183 aa13.82□□□□□ -0.2
RNF41-203ENST00000547967 NFXL1Q6ZNB6 911 aa13.82□□□□□ -0.2
RNF41-203ENST00000547967 RIOK1Q9BRS2 568 aaKnown RBP13.82□□□□□ -0.2
RNF41-203ENST00000547967 MYL10Q9BUA6 226 aa13.82□□□□□ -0.2
RNF41-203ENST00000547967 UBR3Q6ZT12 1888 aa13.82□□□□□ -0.2
RNF41-203ENST00000547967 CYP2D7A0A087X1C5 515 aa13.81□□□□□ -0.2
RNF41-203ENST00000547967 FDPSP14324 419 aaKnown RBP13.81□□□□□ -0.2
RNF41-203ENST00000547967 ADD1P35611 737 aaKnown RBP13.81□□□□□ -0.2
RNF41-203ENST00000547967 CEBPZQ03701 1054 aaKnown RBP13.81□□□□□ -0.2
RNF41-203ENST00000547967 ZNF827Q17R98 1081 aa13.81□□□□□ -0.2
RNF41-203ENST00000547967 TMEM67Q5HYA8 995 aa13.81□□□□□ -0.2
RNF41-203ENST00000547967 ZNF772Q68DY9 489 aaPredicted RBP13.81□□□□□ -0.2
RNF41-203ENST00000547967 OTUD7BQ6GQQ9 843 aa13.81□□□□□ -0.2
RNF41-203ENST00000547967 TTC6Q86TZ1 520 aa13.81□□□□□ -0.2
RNF41-203ENST00000547967 MICU3Q86XE3 530 aa13.81□□□□□ -0.2
RNF41-203ENST00000547967 NSUN4Q96CB9 384 aaKnown RBP13.81□□□□□ -0.2
RNF41-203ENST00000547967 AATFQ9NY61 560 aaKnown RBP eCLIP13.81□□□□□ -0.2
RNF41-203ENST00000547967 ISY1Q9ULR0 285 aaKnown RBP13.81□□□□□ -0.2
RNF41-203ENST00000547967 A0A1B0GUL6 1792 aa13.81□□□□□ -0.2
RNF41-203ENST00000547967 SH2B2O14492 632 aaPredicted RBP13.81□□□□□ -0.2
RNF41-203ENST00000547967 IFIT3O14879 490 aaKnown RBP13.81□□□□□ -0.2
RNF41-203ENST00000547967 IGDCC4Q8TDY8 1250 aa13.81□□□□□ -0.2
RNF41-203ENST00000547967 SALL1Q9NSC2 1324 aa13.81□□□□□ -0.2
RNF41-203ENST00000547967 POLRMTO00411 1230 aaKnown RBP13.8□□□□□ -0.2
RNF41-203ENST00000547967 SEMA3EO15041 775 aa13.8□□□□□ -0.2
RNF41-203ENST00000547967 GPSM2P81274 684 aa13.8□□□□□ -0.2
RNF41-203ENST00000547967 GJB4Q9NTQ9 266 aa13.8□□□□□ -0.2
RNF41-203ENST00000547967 KIF3AQ9Y496 699 aa13.8□□□□□ -0.2
RNF41-203ENST00000547967 DHX16O60231 1041 aaKnown RBP13.8□□□□□ -0.2
RNF41-203ENST00000547967 PPARAQ07869 468 aa13.8□□□□□ -0.2
RNF41-203ENST00000547967 CSPP1Q1MSJ5 1256 aa13.8□□□□□ -0.2
RNF41-203ENST00000547967 ZMYM6O95789 1325 aa13.8□□□□□ -0.2
RNF41-203ENST00000547967 XDHP47989 1333 aa13.8□□□□□ -0.2
RNF41-203ENST00000547967 UFL1O94874 794 aa13.79□□□□□ -0.2
RNF41-203ENST00000547967 METAP2P50579 478 aaKnown RBP eCLIP13.79□□□□□ -0.2
RNF41-203ENST00000547967 RESTQ13127 1097 aa13.79□□□□□ -0.2
RNF41-203ENST00000547967 SLC4A8Q2Y0W8 1093 aa13.79□□□□□ -0.2
RNF41-203ENST00000547967 CRY2Q49AN0 593 aa13.79□□□□□ -0.2
RNF41-203ENST00000547967 APOA5Q6Q788 366 aa13.79□□□□□ -0.2
RNF41-203ENST00000547967 SYAP1Q96A49 352 aaPredicted RBP13.79□□□□□ -0.2
RNF41-203ENST00000547967 SPATA32Q96LK8 384 aa13.79□□□□□ -0.2
RNF41-203ENST00000547967 LY9Q9HBG7 655 aa13.79□□□□□ -0.2
RNF41-203ENST00000547967 ORC3Q9UBD5 711 aaPredicted RBP13.79□□□□□ -0.2
RNF41-203ENST00000547967 WDR19Q8NEZ3 1342 aa13.79□□□□□ -0.2
RNF41-203ENST00000547967 COL23A1Q86Y22 540 aaPredicted RBP13.79□□□□□ -0.2
RNF41-203ENST00000547967 RBM17Q96I25 401 aaKnown RBP13.79□□□□□ -0.2
RNF41-203ENST00000547967 TMEM87BQ96K49 555 aa13.79□□□□□ -0.2
RNF41-203ENST00000547967 KRT23Q9C075 422 aa13.79□□□□□ -0.2
RNF41-203ENST00000547967 RBSNQ9H1K0 784 aa13.79□□□□□ -0.2
RNF41-203ENST00000547967 CNNM2Q9H8M5 875 aa13.79□□□□□ -0.2
RNF41-203ENST00000547967 LEMD3Q9Y2U8 911 aa13.79□□□□□ -0.2
RNF41-203ENST00000547967 PRDM1O75626 825 aa13.78□□□□□ -0.2
RNF41-203ENST00000547967 EVX2Q03828 476 aa13.78□□□□□ -0.2
RNF41-203ENST00000547967 LRSAM1Q6UWE0 723 aa13.78□□□□□ -0.2
RNF41-203ENST00000547967 DZIP1Q86YF9 867 aaKnown RBP13.78□□□□□ -0.2
RNF41-203ENST00000547967 STAG1Q8WVM7 1258 aa13.78□□□□□ -0.2
RNF41-203ENST00000547967 FTOQ9C0B1 505 aaKnown RBP eCLIP13.78□□□□□ -0.2
RNF41-203ENST00000547967 IRS2Q9Y4H2 1338 aa13.78□□□□□ -0.2
RNF41-203ENST00000547967 ZBTB43O43298 467 aa13.78□□□□□ -0.2
RNF41-203ENST00000547967 CDC27P30260 824 aa13.78□□□□□ -0.2
RNF41-203ENST00000547967 NASPP49321 788 aaPredicted RBP13.78□□□□□ -0.2
RNF41-203ENST00000547967 PHKBQ93100 1093 aa13.78□□□□□ -0.2
RNF41-203ENST00000547967 ZSCAN16Q9H4T2 348 aaPredicted RBP13.78□□□□□ -0.2
RNF41-203ENST00000547967 CACNA1SQ13698 1873 aa13.78□□□□□ -0.2
RNF41-203ENST00000547967 GOLGA6L4A6NEF3 574 aa13.78□□□□□ -0.2
RNF41-203ENST00000547967 CCDC69A6NI79 296 aa13.78□□□□□ -0.2
RNF41-203ENST00000547967 USP17L12C9JPN9 530 aa13.78□□□□□ -0.2
RNF41-203ENST00000547967 USP17L21D6R901 530 aa13.78□□□□□ -0.2
RNF41-203ENST00000547967 RXRBP28702 533 aa13.78□□□□□ -0.2
RNF41-203ENST00000547967 GRIK5Q16478 980 aa13.78□□□□□ -0.2
RNF41-203ENST00000547967 CHMP4CQ96CF2 233 aa13.78□□□□□ -0.2
RNF41-203ENST00000547967 AIFM3Q96NN9 605 aa13.78□□□□□ -0.2
RNF41-203ENST00000547967 SCAND2PQ9GZW5 306 aaPredicted RBP13.78□□□□□ -0.2
RNF41-203ENST00000547967 SLC12A7Q9Y666 1083 aa13.78□□□□□ -0.2
RNF41-203ENST00000547967 MSL1Q68DK7 614 aa13.77□□□□□ -0.21
RNF41-203ENST00000547967 RNF214Q8ND24 703 aa13.77□□□□□ -0.21
RNF41-203ENST00000547967 LEO1Q8WVC0 666 aaPredicted RBP13.77□□□□□ -0.21
RNF41-203ENST00000547967 C8orf76Q96K31 380 aa13.77□□□□□ -0.21
RNF41-203ENST00000547967 C6orf229H3BNL8 230 aa13.77□□□□□ -0.21
RNF41-203ENST00000547967 PLSCR1O15162 318 aa13.77□□□□□ -0.21
RNF41-203ENST00000547967 DIXDC1Q155Q3 683 aa13.77□□□□□ -0.21
RNF41-203ENST00000547967 ZNF804AQ7Z570 1209 aa13.77□□□□□ -0.21
RNF41-203ENST00000547967 CCDC82Q8N4S0 544 aa13.77□□□□□ -0.21
RNF41-203ENST00000547967 RNF41Q9H4P4 317 aaPredicted RBP13.77□□□□□ -0.21
RNF41-203ENST00000547967 RTN4Q9NQC3 1192 aaKnown RBP13.77□□□□□ -0.21
RNF41-203ENST00000547967 GGA1Q9UJY5 639 aa13.77□□□□□ -0.21
RNF41-203ENST00000547967 MYH13Q9UKX3 1938 aa13.76□□□□□ -0.21
RNF41-203ENST00000547967 GOLGA8AA7E2F4 631 aa13.76□□□□□ -0.21
RNF41-203ENST00000547967 RANBP6O60518 1105 aaKnown RBP13.76□□□□□ -0.21
RNF41-203ENST00000547967 POLR3DP05423 398 aaPredicted RBP13.76□□□□□ -0.21
RNF41-203ENST00000547967 LDHBP07195 334 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms