RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 RB1CC1Q8TDY2 1594 aa5.08□□□□□ -1.6
DEPDC4-204ENST00000547823 TMEM265A0A087WTH1 108 aa5.07□□□□□ -1.6
DEPDC4-204ENST00000547823 AOC2O75106 756 aa5.07□□□□□ -1.6
DEPDC4-204ENST00000547823 ZNF124Q15973 351 aa5.07□□□□□ -1.6
DEPDC4-204ENST00000547823 ANGEL2Q5VTE6 544 aaKnown RBP5.07□□□□□ -1.6
DEPDC4-204ENST00000547823 ZNF574Q6ZN55 896 aaPredicted RBP5.07□□□□□ -1.6
DEPDC4-204ENST00000547823 ARHGAP27Q6ZUM4 889 aa5.07□□□□□ -1.6
DEPDC4-204ENST00000547823 SPRED2Q7Z698 418 aa5.07□□□□□ -1.6
DEPDC4-204ENST00000547823 FLAD1Q8NFF5 587 aa5.07□□□□□ -1.6
DEPDC4-204ENST00000547823 LIN7BQ9HAP6 207 aa5.07□□□□□ -1.6
DEPDC4-204ENST00000547823 PIDD1Q9HB75 910 aa5.07□□□□□ -1.6
DEPDC4-204ENST00000547823 ZFYVE28Q9HCC9 887 aa5.07□□□□□ -1.6
DEPDC4-204ENST00000547823 FOXD3Q9UJU5 478 aaPredicted RBP5.07□□□□□ -1.6
DEPDC4-204ENST00000547823 RNASE1P07998 156 aaKnown RBP5.06□□□□□ -1.6
DEPDC4-204ENST00000547823 PTPN12Q05209 780 aaKnown RBP5.06□□□□□ -1.6
DEPDC4-204ENST00000547823 SF3B2Q13435 895 aaKnown RBP5.06□□□□□ -1.6
DEPDC4-204ENST00000547823 PDE3AQ14432 1141 aa5.06□□□□□ -1.6
DEPDC4-204ENST00000547823 ZNF423Q2M1K9 1284 aa5.06□□□□□ -1.6
DEPDC4-204ENST00000547823 GALNT12Q8IXK2 581 aa5.06□□□□□ -1.6
DEPDC4-204ENST00000547823 GJD3Q8N144 294 aa5.06□□□□□ -1.6
DEPDC4-204ENST00000547823 GTF3C2Q8WUA4 911 aaPredicted RBP5.06□□□□□ -1.6
DEPDC4-204ENST00000547823 HRASLS5Q96KN8 279 aa5.06□□□□□ -1.6
DEPDC4-204ENST00000547823 SLFN14P0C7P3 912 aa5.05□□□□□ -1.6
DEPDC4-204ENST00000547823 FAM87AP0C7U9 286 aa5.05□□□□□ -1.6
DEPDC4-204ENST00000547823 CD8BP10966 210 aa5.05□□□□□ -1.6
DEPDC4-204ENST00000547823 LCE4AQ5TA78 99 aa5.05□□□□□ -1.6
DEPDC4-204ENST00000547823 SLC23A3Q6PIS1 610 aa5.05□□□□□ -1.6
DEPDC4-204ENST00000547823 ZSCAN18Q8TBC5 510 aaPredicted RBP5.05□□□□□ -1.6
DEPDC4-204ENST00000547823 TRIM56Q9BRZ2 755 aaKnown RBP5.05□□□□□ -1.6
DEPDC4-204ENST00000547823 WDR18Q9BV38 432 aa5.05□□□□□ -1.6
DEPDC4-204ENST00000547823 LATS2Q9NRM7 1088 aa5.05□□□□□ -1.6
DEPDC4-204ENST00000547823 MBNL3Q9NUK0 354 aaKnown RBP5.05□□□□□ -1.6
DEPDC4-204ENST00000547823 SNX11Q9Y5W9 270 aa5.05□□□□□ -1.6
DEPDC4-204ENST00000547823 A0A1W2PP55 124 aa5.04□□□□□ -1.6
DEPDC4-204ENST00000547823 METTL12A8MUP2 240 aa5.04□□□□□ -1.6
DEPDC4-204ENST00000547823 CEACAM5P06731 702 aa5.04□□□□□ -1.6
DEPDC4-204ENST00000547823 ITPKAP23677 461 aa5.04□□□□□ -1.6
DEPDC4-204ENST00000547823 RPS26P11Q5JNZ5 115 aaPredicted RBP5.04□□□□□ -1.6
DEPDC4-204ENST00000547823 KIAA0319Q5VV43 1072 aa5.04□□□□□ -1.6
DEPDC4-204ENST00000547823 PLD6Q8N2A8 252 aaKnown RBP5.04□□□□□ -1.6
DEPDC4-204ENST00000547823 LRRN4CLQ8ND94 238 aa5.04□□□□□ -1.6
DEPDC4-204ENST00000547823 TCF12Q99081 682 aa5.04□□□□□ -1.6
DEPDC4-204ENST00000547823 ZNF576Q9H609 170 aa5.04□□□□□ -1.6
DEPDC4-204ENST00000547823 SLAIN2Q9P270 581 aa5.04□□□□□ -1.6
DEPDC4-204ENST00000547823 LRRC10BA6NIK2 292 aa5.03□□□□□ -1.6
DEPDC4-204ENST00000547823 TMPRSS2O15393 492 aa5.03□□□□□ -1.6
DEPDC4-204ENST00000547823 DYNC1LI2O43237 492 aaPredicted RBP5.03□□□□□ -1.6
DEPDC4-204ENST00000547823 TSPAN15O95858 294 aa5.03□□□□□ -1.6
DEPDC4-204ENST00000547823 CTSBP07858 339 aa5.03□□□□□ -1.6
DEPDC4-204ENST00000547823 RAP1GAPP47736 663 aa5.03□□□□□ -1.6
DEPDC4-204ENST00000547823 GRIA4P48058 902 aa5.03□□□□□ -1.6
DEPDC4-204ENST00000547823 ID3Q02535 119 aa5.03□□□□□ -1.6
DEPDC4-204ENST00000547823 BNIP3Q12983 259 aa5.03□□□□□ -1.6
DEPDC4-204ENST00000547823 ZSWIM9Q86XI8 627 aa5.03□□□□□ -1.6
DEPDC4-204ENST00000547823 CCDC97Q96F63 343 aaPredicted RBP5.03□□□□□ -1.6
DEPDC4-204ENST00000547823 KRT82Q9NSB4 513 aa5.03□□□□□ -1.6
DEPDC4-204ENST00000547823 CRIM1Q9NZV1 1036 aa5.03□□□□□ -1.6
DEPDC4-204ENST00000547823 MESP2Q0VG99 397 aa5.02□□□□□ -1.61
DEPDC4-204ENST00000547823 KCNMB1Q16558 191 aa5.02□□□□□ -1.61
DEPDC4-204ENST00000547823 AOC3Q16853 763 aa5.02□□□□□ -1.61
DEPDC4-204ENST00000547823 SIAH1Q8IUQ4 282 aa5.02□□□□□ -1.61
DEPDC4-204ENST00000547823 SMYD4Q8IYR2 804 aaPredicted RBP5.02□□□□□ -1.61
DEPDC4-204ENST00000547823 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
DEPDC4-204ENST00000547823 RAPGEFL1Q9UHV5 662 aa5.02□□□□□ -1.61
DEPDC4-204ENST00000547823 SERPINA10Q9UK55 444 aa5.02□□□□□ -1.61
DEPDC4-204ENST00000547823 UNC13AQ9UPW8 1703 aa5.02□□□□□ -1.61
DEPDC4-204ENST00000547823 FZD6O60353 706 aa5.01□□□□□ -1.61
DEPDC4-204ENST00000547823 FKBP4Q02790 459 aaKnown RBP eCLIP5.01□□□□□ -1.61
DEPDC4-204ENST00000547823 CDK5R2Q13319 367 aa5.01□□□□□ -1.61
DEPDC4-204ENST00000547823 SPRED3Q2MJR0 410 aa5.01□□□□□ -1.61
DEPDC4-204ENST00000547823 FAM181AQ8N9Y4 354 aa5.01□□□□□ -1.61
DEPDC4-204ENST00000547823 ASB11Q8WXH4 323 aa5.01□□□□□ -1.61
DEPDC4-204ENST00000547823 EHD4Q9H223 541 aa5.01□□□□□ -1.61
DEPDC4-204ENST00000547823 ADAMTS6Q9UKP5 1117 aa5.01□□□□□ -1.61
DEPDC4-204ENST00000547823 PCOLCE2Q9UKZ9 415 aa5.01□□□□□ -1.61
DEPDC4-204ENST00000547823 PPP1R9AQ9ULJ8 1098 aa5.01□□□□□ -1.61
DEPDC4-204ENST00000547823 POLR3DP05423 398 aaPredicted RBP5□□□□□ -1.61
DEPDC4-204ENST00000547823 SSFA2P28290 1259 aa5□□□□□ -1.61
DEPDC4-204ENST00000547823 AFMP43652 599 aa5□□□□□ -1.61
DEPDC4-204ENST00000547823 OXCT1P55809 520 aa5□□□□□ -1.61
DEPDC4-204ENST00000547823 KIF4BQ2VIQ3 1234 aa5□□□□□ -1.61
DEPDC4-204ENST00000547823 PRPF40BQ6NWY9 871 aaKnown RBP5□□□□□ -1.61
DEPDC4-204ENST00000547823 FANCD2OSQ96PS1 177 aa5□□□□□ -1.61
DEPDC4-204ENST00000547823 TNKS2Q9H2K2 1166 aa5□□□□□ -1.61
DEPDC4-204ENST00000547823 GTF2IRD1Q9UHL9 959 aa5□□□□□ -1.61
DEPDC4-204ENST00000547823 TRAK1Q9UPV9 953 aa5□□□□□ -1.61
DEPDC4-204ENST00000547823 ECEL1O95672 775 aa4.99□□□□□ -1.61
DEPDC4-204ENST00000547823 PDE3BQ13370 1112 aa4.99□□□□□ -1.61
DEPDC4-204ENST00000547823 ANKLE2Q86XL3 938 aa4.99□□□□□ -1.61
DEPDC4-204ENST00000547823 DUSP23Q9BVJ7 150 aa4.99□□□□□ -1.61
DEPDC4-204ENST00000547823 LGR6Q9HBX8 967 aa4.99□□□□□ -1.61
DEPDC4-204ENST00000547823 IGF2BP3O00425 579 aaKnown RBP eCLIP4.98□□□□□ -1.61
DEPDC4-204ENST00000547823 PPP2R3AQ06190 1150 aa4.98□□□□□ -1.61
DEPDC4-204ENST00000547823 MLANAQ16655 118 aa4.98□□□□□ -1.61
DEPDC4-204ENST00000547823 CCDC120Q96HB5 630 aa4.98□□□□□ -1.61
DEPDC4-204ENST00000547823 CECR2Q9BXF3 1484 aa4.98□□□□□ -1.61
DEPDC4-204ENST00000547823 RNGTTO60942 597 aaKnown RBP4.97□□□□□ -1.61
DEPDC4-204ENST00000547823 CPNE3O75131 537 aaKnown RBP4.97□□□□□ -1.61
DEPDC4-204ENST00000547823 GSTP1P09211 210 aaKnown RBP4.97□□□□□ -1.61
DEPDC4-204ENST00000547823 CLCN7P51798 805 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms