RNA–Protein interactions for RNA: ENST00000546884.1

ERBB3-205, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-205ENST00000546884 CNTNAP1P78357 1384 aa18■□□□□ 0.47
ERBB3-205ENST00000546884 GLRX3O76003 335 aaKnown RBP17.99■□□□□ 0.47
ERBB3-205ENST00000546884 BTDP43251 543 aa17.99■□□□□ 0.47
ERBB3-205ENST00000546884 NFIAQ12857 509 aa17.99■□□□□ 0.47
ERBB3-205ENST00000546884 TTF1Q15361 905 aaPredicted RBP17.99■□□□□ 0.47
ERBB3-205ENST00000546884 ERICH6BQ5W0A0 696 aa17.99■□□□□ 0.47
ERBB3-205ENST00000546884 CST9Q5W186 159 aa17.99■□□□□ 0.47
ERBB3-205ENST00000546884 NAA16Q6N069 864 aaPredicted RBP17.99■□□□□ 0.47
ERBB3-205ENST00000546884 CENPQQ7L2Z9 268 aaPredicted RBP17.99■□□□□ 0.47
ERBB3-205ENST00000546884 CDAN1Q8IWY9 1227 aa17.99■□□□□ 0.47
ERBB3-205ENST00000546884 USP40Q9NVE5 1235 aa17.99■□□□□ 0.47
ERBB3-205ENST00000546884 ZBTB47Q9UFB7 747 aaPredicted RBP17.99■□□□□ 0.47
ERBB3-205ENST00000546884 TRPM7Q96QT4 1865 aa17.99■□□□□ 0.47
ERBB3-205ENST00000546884 CDK5RAP2Q96SN8 1893 aa17.99■□□□□ 0.47
ERBB3-205ENST00000546884 IGSF3O75054 1194 aa17.98■□□□□ 0.47
ERBB3-205ENST00000546884 PDE6AP16499 860 aa17.98■□□□□ 0.47
ERBB3-205ENST00000546884 VEZTQ9HBM0 779 aa17.98■□□□□ 0.47
ERBB3-205ENST00000546884 RFX7Q2KHR2 1363 aa17.98■□□□□ 0.47
ERBB3-205ENST00000546884 TCP10L2B9ZVM9 353 aa17.97■□□□□ 0.47
ERBB3-205ENST00000546884 ERC2O15083 957 aa17.97■□□□□ 0.47
ERBB3-205ENST00000546884 WDHD1O75717 1129 aaPredicted RBP17.97■□□□□ 0.47
ERBB3-205ENST00000546884 LDHCP07864 332 aa17.97■□□□□ 0.47
ERBB3-205ENST00000546884 CYP7A1P22680 504 aa17.97■□□□□ 0.47
ERBB3-205ENST00000546884 ADD2P35612 726 aa17.97■□□□□ 0.47
ERBB3-205ENST00000546884 PPP4CP60510 307 aa17.97■□□□□ 0.47
ERBB3-205ENST00000546884 DYNLL1P63167 89 aaKnown RBP17.97■□□□□ 0.47
ERBB3-205ENST00000546884 GSTO1P78417 241 aa17.97■□□□□ 0.47
ERBB3-205ENST00000546884 MAP3K12Q12852 859 aa17.97■□□□□ 0.47
ERBB3-205ENST00000546884 SLC9C2Q5TAH2 1124 aa17.97■□□□□ 0.47
ERBB3-205ENST00000546884 SULF1Q8IWU6 871 aa17.97■□□□□ 0.47
ERBB3-205ENST00000546884 ZFPM1Q8IX07 1006 aa17.97■□□□□ 0.47
ERBB3-205ENST00000546884 KBTBD3Q8NAB2 608 aa17.97■□□□□ 0.47
ERBB3-205ENST00000546884 CCDC136Q96JN2 1154 aa17.97■□□□□ 0.47
ERBB3-205ENST00000546884 TEPSINQ96N21 525 aa17.97■□□□□ 0.47
ERBB3-205ENST00000546884 DEFB129Q9H1M3 183 aa17.97■□□□□ 0.47
ERBB3-205ENST00000546884 DDX4Q9NQI0 724 aaKnown RBP17.97■□□□□ 0.47
ERBB3-205ENST00000546884 FAM198AQ9UFP1 575 aa17.97■□□□□ 0.47
ERBB3-205ENST00000546884 CEP350Q5VT06 3117 aa17.97■□□□□ 0.47
ERBB3-205ENST00000546884 ZNF532Q9HCE3 1301 aa17.97■□□□□ 0.47
ERBB3-205ENST00000546884 MYO1BO43795 1136 aa17.96■□□□□ 0.47
ERBB3-205ENST00000546884 RASA3Q14644 834 aa17.96■□□□□ 0.47
ERBB3-205ENST00000546884 APOBEC3FQ8IUX4 373 aaKnown RBP17.96■□□□□ 0.47
ERBB3-205ENST00000546884 SLF2Q8IX21 1173 aa17.96■□□□□ 0.47
ERBB3-205ENST00000546884 SH3RF3Q8TEJ3 882 aaPredicted RBP17.96■□□□□ 0.47
ERBB3-205ENST00000546884 CDCA5Q96FF9 252 aa17.96■□□□□ 0.47
ERBB3-205ENST00000546884 PPP4R2Q9NY27 417 aa17.96■□□□□ 0.47
ERBB3-205ENST00000546884 AATFQ9NY61 560 aaKnown RBP eCLIP17.96■□□□□ 0.47
ERBB3-205ENST00000546884 HTRA3P83110 453 aa17.95■□□□□ 0.46
ERBB3-205ENST00000546884 MIGA1Q8NAN2 632 aa17.95■□□□□ 0.46
ERBB3-205ENST00000546884 RIOK1Q9BRS2 568 aaKnown RBP17.95■□□□□ 0.46
ERBB3-205ENST00000546884 IDI2Q9BXS1 227 aa17.95■□□□□ 0.46
ERBB3-205ENST00000546884 TMEM39BQ9GZU3 492 aa17.95■□□□□ 0.46
ERBB3-205ENST00000546884 FOCADQ5VW36 1801 aa17.95■□□□□ 0.46
ERBB3-205ENST00000546884 SSC5DA1L4H1 1573 aa17.95■□□□□ 0.46
ERBB3-205ENST00000546884 GSPT1P15170 499 aaKnown RBP17.94■□□□□ 0.46
ERBB3-205ENST00000546884 APLP1P51693 650 aa17.94■□□□□ 0.46
ERBB3-205ENST00000546884 FKBP1CQ5VVH2 108 aa17.94■□□□□ 0.46
ERBB3-205ENST00000546884 SH3BP5LQ7L8J4 393 aa17.94■□□□□ 0.46
ERBB3-205ENST00000546884 UBE3CQ15386 1083 aa17.93■□□□□ 0.46
ERBB3-205ENST00000546884 NBPF12Q5TAG4 269 aaPredicted RBP17.93■□□□□ 0.46
ERBB3-205ENST00000546884 FAM83AQ86UY5 434 aa17.93■□□□□ 0.46
ERBB3-205ENST00000546884 FZD1Q9UP38 647 aa17.93■□□□□ 0.46
ERBB3-205ENST00000546884 CELF2O95319 508 aaKnown RBP17.92■□□□□ 0.46
ERBB3-205ENST00000546884 HSPA6P17066 643 aa17.92■□□□□ 0.46
ERBB3-205ENST00000546884 RGS3P49796 1198 aa17.92■□□□□ 0.46
ERBB3-205ENST00000546884 TCP10Q12799 353 aa17.92■□□□□ 0.46
ERBB3-205ENST00000546884 TMED8Q6PL24 325 aaPredicted RBP17.92■□□□□ 0.46
ERBB3-205ENST00000546884 FAM151AQ8WW52 585 aa17.92■□□□□ 0.46
ERBB3-205ENST00000546884 PUS7LQ9H0K6 701 aaKnown RBP17.92■□□□□ 0.46
ERBB3-205ENST00000546884 RNF113AO15541 343 aaKnown RBP17.91■□□□□ 0.46
ERBB3-205ENST00000546884 SLURP2P0DP57 97 aa17.91■□□□□ 0.46
ERBB3-205ENST00000546884 TTC22Q5TAA0 569 aa17.91■□□□□ 0.46
ERBB3-205ENST00000546884 MOB2Q70IA6 237 aa17.91■□□□□ 0.46
ERBB3-205ENST00000546884 LCORLQ8N3X6 602 aa17.91■□□□□ 0.46
ERBB3-205ENST00000546884 OSBP2Q969R2 916 aa17.91■□□□□ 0.46
ERBB3-205ENST00000546884 EVI5LQ96CN4 794 aa17.91■□□□□ 0.46
ERBB3-205ENST00000546884 ZNF408Q9H9D4 720 aa17.91■□□□□ 0.46
ERBB3-205ENST00000546884 PPP2R3BQ9Y5P8 575 aa17.91■□□□□ 0.46
ERBB3-205ENST00000546884 DDTLA6NHG4 134 aaPredicted RBP17.9■□□□□ 0.46
ERBB3-205ENST00000546884 BAG3O95817 575 aa17.9■□□□□ 0.46
ERBB3-205ENST00000546884 SEC62Q99442 399 aaKnown RBP17.9■□□□□ 0.46
ERBB3-205ENST00000546884 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.9■□□□□ 0.46
ERBB3-205ENST00000546884 SIPA1L1O43166 1804 aa17.89■□□□□ 0.45
ERBB3-205ENST00000546884 MAGEB6P1A0A0J9YX57 407 aa17.89■□□□□ 0.45
ERBB3-205ENST00000546884 TMEM88BA6NKF7 163 aa17.89■□□□□ 0.45
ERBB3-205ENST00000546884 M0R2C6 588 aa17.89■□□□□ 0.45
ERBB3-205ENST00000546884 ENTPD3O75355 529 aa17.89■□□□□ 0.45
ERBB3-205ENST00000546884 NPM3O75607 178 aaKnown RBP17.89■□□□□ 0.45
ERBB3-205ENST00000546884 PICALMQ13492 652 aa17.89■□□□□ 0.45
ERBB3-205ENST00000546884 TNFAIP1Q13829 316 aa17.89■□□□□ 0.45
ERBB3-205ENST00000546884 TEX11Q8IYF3 940 aa17.89■□□□□ 0.45
ERBB3-205ENST00000546884 TGFBRAP1Q8WUH2 860 aa17.89■□□□□ 0.45
ERBB3-205ENST00000546884 FSD1Q9BTV5 496 aa17.89■□□□□ 0.45
ERBB3-205ENST00000546884 ARMT1Q9H993 441 aa17.89■□□□□ 0.45
ERBB3-205ENST00000546884 TMOD2Q9NZR1 351 aa17.89■□□□□ 0.45
ERBB3-205ENST00000546884 MKRN1Q9UHC7 482 aaKnown RBP17.89■□□□□ 0.45
ERBB3-205ENST00000546884 AK9Q5TCS8 1911 aa17.89■□□□□ 0.45
ERBB3-205ENST00000546884 PCNTO95613 3336 aa17.89■□□□□ 0.45
ERBB3-205ENST00000546884 TRIM6-TRIM34B2RNG4 842 aa17.88■□□□□ 0.45
ERBB3-205ENST00000546884 PRKAB2O43741 272 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms