RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 BTDP43251 543 aa21.19■□□□□ 0.98
CD9-211ENST00000546073 FKBP1BP68106 108 aa21.19■□□□□ 0.98
CD9-211ENST00000546073 FKBP1CQ5VVH2 108 aa21.19■□□□□ 0.98
CD9-211ENST00000546073 APOBEC3HQ6NTF7 200 aaKnown RBP21.19■□□□□ 0.98
CD9-211ENST00000546073 ARMC9Q7Z3E5 817 aa21.19■□□□□ 0.98
CD9-211ENST00000546073 GBA2Q9HCG7 927 aaPredicted RBP21.19■□□□□ 0.98
CD9-211ENST00000546073 RASA3Q14644 834 aa21.18■□□□□ 0.98
CD9-211ENST00000546073 MAGEB6Q8N7X4 407 aa21.18■□□□□ 0.98
CD9-211ENST00000546073 LNPKQ9C0E8 428 aa21.18■□□□□ 0.98
CD9-211ENST00000546073 PCDHAC2Q9Y5I4 1007 aa21.18■□□□□ 0.98
CD9-211ENST00000546073 SLC9C2Q5TAH2 1124 aa21.17■□□□□ 0.98
CD9-211ENST00000546073 FAM83AQ86UY5 434 aa21.17■□□□□ 0.98
CD9-211ENST00000546073 PIH1D3Q9NQM4 214 aaKnown RBP21.17■□□□□ 0.98
CD9-211ENST00000546073 GAKO14976 1311 aa21.17■□□□□ 0.98
CD9-211ENST00000546073 MYH13Q9UKX3 1938 aa21.16■□□□□ 0.98
CD9-211ENST00000546073 GPR75-ASB3A0A0A6YYF3 556 aa21.16■□□□□ 0.98
CD9-211ENST00000546073 NUCB1Q02818 461 aa21.16■□□□□ 0.98
CD9-211ENST00000546073 CDC42EP5Q6NZY7 148 aa21.16■□□□□ 0.98
CD9-211ENST00000546073 ZSCAN29Q8IWY8 852 aaPredicted RBP21.16■□□□□ 0.98
CD9-211ENST00000546073 CCDC136Q96JN2 1154 aa21.16■□□□□ 0.98
CD9-211ENST00000546073 ECE1P42892 770 aa21.15■□□□□ 0.98
CD9-211ENST00000546073 DEFB115Q30KQ5 88 aa21.15■□□□□ 0.98
CD9-211ENST00000546073 NDUFB9Q9Y6M9 179 aa21.15■□□□□ 0.98
CD9-211ENST00000546073 ADAMTSL1Q8N6G6 1762 aa21.15■□□□□ 0.98
CD9-211ENST00000546073 IREB2P48200 963 aaKnown RBP21.14■□□□□ 0.97
CD9-211ENST00000546073 DCAF15Q66K64 600 aa21.14■□□□□ 0.97
CD9-211ENST00000546073 TEX11Q8IYF3 940 aa21.14■□□□□ 0.97
CD9-211ENST00000546073 FAM151AQ8WW52 585 aa21.14■□□□□ 0.97
CD9-211ENST00000546073 DDRGK1Q96HY6 314 aa21.14■□□□□ 0.97
CD9-211ENST00000546073 ANTXR1Q9H6X2 564 aa21.14■□□□□ 0.97
CD9-211ENST00000546073 AATFQ9NY61 560 aaKnown RBP eCLIP21.14■□□□□ 0.97
CD9-211ENST00000546073 SCAF8Q9UPN6 1271 aaKnown RBP21.14■□□□□ 0.97
CD9-211ENST00000546073 ENTPD3O75355 529 aa21.13■□□□□ 0.97
CD9-211ENST00000546073 ZFYP08048 801 aaPredicted RBP21.13■□□□□ 0.97
CD9-211ENST00000546073 CACNB3P54284 484 aa21.13■□□□□ 0.97
CD9-211ENST00000546073 HUNKP57058 714 aa21.13■□□□□ 0.97
CD9-211ENST00000546073 TCP10Q12799 353 aa21.13■□□□□ 0.97
CD9-211ENST00000546073 PRAMEF18Q5VWM3 479 aa21.13■□□□□ 0.97
CD9-211ENST00000546073 ERICH6BQ5W0A0 696 aa21.13■□□□□ 0.97
CD9-211ENST00000546073 MAGEB6P1A0A0J9YX57 407 aa21.12■□□□□ 0.97
CD9-211ENST00000546073 USP5P45974 858 aa21.12■□□□□ 0.97
CD9-211ENST00000546073 PICALMQ13492 652 aa21.12■□□□□ 0.97
CD9-211ENST00000546073 CST9Q5W186 159 aa21.12■□□□□ 0.97
CD9-211ENST00000546073 FSD1Q9BTV5 496 aa21.12■□□□□ 0.97
CD9-211ENST00000546073 IDI2Q9BXS1 227 aa21.12■□□□□ 0.97
CD9-211ENST00000546073 TRIM34Q9BYJ4 488 aa21.12■□□□□ 0.97
CD9-211ENST00000546073 TLL2Q9Y6L7 1015 aa21.12■□□□□ 0.97
CD9-211ENST00000546073 TRIM6-TRIM34B2RNG4 842 aa21.11■□□□□ 0.97
CD9-211ENST00000546073 PDE6AP16499 860 aa21.11■□□□□ 0.97
CD9-211ENST00000546073 PDE1AP54750 535 aa21.11■□□□□ 0.97
CD9-211ENST00000546073 PPP4CP60510 307 aa21.11■□□□□ 0.97
CD9-211ENST00000546073 FMR1Q06787 632 aaKnown RBP eCLIP21.11■□□□□ 0.97
CD9-211ENST00000546073 PRKG1Q13976 671 aa21.11■□□□□ 0.97
CD9-211ENST00000546073 CENPQQ7L2Z9 268 aaPredicted RBP21.11■□□□□ 0.97
CD9-211ENST00000546073 STAP2Q9UGK3 403 aa21.11■□□□□ 0.97
CD9-211ENST00000546073 AOX1Q06278 1338 aa21.1■□□□□ 0.97
CD9-211ENST00000546073 ZNF532Q9HCE3 1301 aa21.1■□□□□ 0.97
CD9-211ENST00000546073 RGS3P49796 1198 aa21.1■□□□□ 0.97
CD9-211ENST00000546073 GRM1Q13255 1194 aa21.1■□□□□ 0.97
CD9-211ENST00000546073 TSHZ3Q63HK5 1081 aa21.1■□□□□ 0.97
CD9-211ENST00000546073 AMOTL1Q8IY63 956 aa21.1■□□□□ 0.97
CD9-211ENST00000546073 KBTBD3Q8NAB2 608 aa21.1■□□□□ 0.97
CD9-211ENST00000546073 CCDC102AQ96A19 550 aa21.1■□□□□ 0.97
CD9-211ENST00000546073 EVI5LQ96CN4 794 aa21.1■□□□□ 0.97
CD9-211ENST00000546073 HHIPL1Q96JK4 782 aa21.1■□□□□ 0.97
CD9-211ENST00000546073 CRNKL1Q9BZJ0 848 aaKnown RBP21.1■□□□□ 0.97
CD9-211ENST00000546073 TMEM39BQ9GZU3 492 aa21.1■□□□□ 0.97
CD9-211ENST00000546073 MKRN1Q9UHC7 482 aaKnown RBP21.1■□□□□ 0.97
CD9-211ENST00000546073 ANGEL1Q9UNK9 670 aaKnown RBP21.1■□□□□ 0.97
CD9-211ENST00000546073 UBE3CQ15386 1083 aa21.09■□□□□ 0.97
CD9-211ENST00000546073 NBPF12Q5TAG4 269 aaPredicted RBP21.09■□□□□ 0.97
CD9-211ENST00000546073 SAPCD2Q86UD0 394 aa21.09■□□□□ 0.97
CD9-211ENST00000546073 MIGA1Q8NAN2 632 aa21.09■□□□□ 0.97
CD9-211ENST00000546073 AIDAQ96BJ3 306 aa21.09■□□□□ 0.97
CD9-211ENST00000546073 UNCXA6NJT0 531 aa21.08■□□□□ 0.97
CD9-211ENST00000546073 NPM3O75607 178 aaKnown RBP21.08■□□□□ 0.97
CD9-211ENST00000546073 HLA-DOAP06340 250 aa21.08■□□□□ 0.97
CD9-211ENST00000546073 ZNF157P51786 506 aaPredicted RBP21.08■□□□□ 0.97
CD9-211ENST00000546073 DLK2Q6UY11 383 aa21.08■□□□□ 0.97
CD9-211ENST00000546073 SH3RF3Q8TEJ3 882 aaPredicted RBP21.08■□□□□ 0.97
CD9-211ENST00000546073 EDC3Q96F86 508 aaKnown RBP21.08■□□□□ 0.97
CD9-211ENST00000546073 DHX36Q9H2U1 1008 aaKnown RBP21.08■□□□□ 0.97
CD9-211ENST00000546073 ZNF646O15015 1829 aaPredicted RBP21.07■□□□□ 0.96
CD9-211ENST00000546073 RASSF10A6NK89 507 aa21.07■□□□□ 0.96
CD9-211ENST00000546073 ADD2P35612 726 aa21.07■□□□□ 0.96
CD9-211ENST00000546073 HTRA3P83110 453 aa21.07■□□□□ 0.96
CD9-211ENST00000546073 RGMBQ6NW40 437 aa21.07■□□□□ 0.96
CD9-211ENST00000546073 OTUD7AQ8TE49 926 aaPredicted RBP21.07■□□□□ 0.96
CD9-211ENST00000546073 TGFBRAP1Q8WUH2 860 aa21.07■□□□□ 0.96
CD9-211ENST00000546073 RILPL2Q969X0 211 aa21.07■□□□□ 0.96
CD9-211ENST00000546073 CSRNP1Q96S65 589 aa21.07■□□□□ 0.96
CD9-211ENST00000546073 CSADQ9Y600 493 aa21.07■□□□□ 0.96
CD9-211ENST00000546073 RNF113AO15541 343 aaKnown RBP21.06■□□□□ 0.96
CD9-211ENST00000546073 NFIAQ12857 509 aa21.06■□□□□ 0.96
CD9-211ENST00000546073 TICAM2Q86XR7 235 aa21.06■□□□□ 0.96
CD9-211ENST00000546073 ANKRD13AQ8IZ07 590 aa21.06■□□□□ 0.96
CD9-211ENST00000546073 PI4K2BQ8TCG2 481 aa21.06■□□□□ 0.96
CD9-211ENST00000546073 KLRG1Q96E93 195 aa21.06■□□□□ 0.96
CD9-211ENST00000546073 SLC10A4Q96EP9 437 aa21.06■□□□□ 0.96
CD9-211ENST00000546073 ZNF341Q9BYN7 854 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms