RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 NR6A1Q15406 480 aa7.56□□□□□ -1.2
SNHG1-225ENST00000545920 ADCK5Q3MIX3 580 aa7.56□□□□□ -1.2
SNHG1-225ENST00000545920 NBPF6Q5VWK0 638 aa7.56□□□□□ -1.2
SNHG1-225ENST00000545920 CCDC73Q6ZRK6 1079 aa7.56□□□□□ -1.2
SNHG1-225ENST00000545920 ARHGEF25Q86VW2 580 aa7.56□□□□□ -1.2
SNHG1-225ENST00000545920 TSC1Q92574 1164 aa7.56□□□□□ -1.2
SNHG1-225ENST00000545920 EAF2Q96CJ1 260 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-225ENST00000545920 ZNF274Q96GC6 653 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-225ENST00000545920 CHAMP1Q96JM3 812 aa7.56□□□□□ -1.2
SNHG1-225ENST00000545920 NBPF4Q96M43 638 aa7.56□□□□□ -1.2
SNHG1-225ENST00000545920 HAUS7Q99871 368 aa7.56□□□□□ -1.2
SNHG1-225ENST00000545920 METTL22Q9BUU2 404 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-225ENST00000545920 TRIM5Q9C035 493 aa7.56□□□□□ -1.2
SNHG1-225ENST00000545920 KCNF1Q9H3M0 494 aa7.56□□□□□ -1.2
SNHG1-225ENST00000545920 ATG3Q9NT62 314 aa7.56□□□□□ -1.2
SNHG1-225ENST00000545920 OGFRQ9NZT2 677 aa7.56□□□□□ -1.2
SNHG1-225ENST00000545920 PALLDQ8WX93 1383 aa7.56□□□□□ -1.2
SNHG1-225ENST00000545920 ABCC12Q96J65 1359 aa7.56□□□□□ -1.2
SNHG1-225ENST00000545920 WDR19Q8NEZ3 1342 aa7.55□□□□□ -1.2
SNHG1-225ENST00000545920 DHX16O60231 1041 aaKnown RBP7.55□□□□□ -1.2
SNHG1-225ENST00000545920 KINO60870 393 aaKnown RBP7.55□□□□□ -1.2
SNHG1-225ENST00000545920 MAP4K4O95819 1239 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-225ENST00000545920 KCNA6P17658 529 aa7.55□□□□□ -1.2
SNHG1-225ENST00000545920 LMOD1P29536 600 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-225ENST00000545920 EVCP57679 992 aa7.55□□□□□ -1.2
SNHG1-225ENST00000545920 COPS2P61201 443 aa7.55□□□□□ -1.2
SNHG1-225ENST00000545920 GCKRQ14397 625 aa7.55□□□□□ -1.2
SNHG1-225ENST00000545920 MCMDC2Q4G0Z9 681 aa7.55□□□□□ -1.2
SNHG1-225ENST00000545920 ANO6Q4KMQ2 910 aa7.55□□□□□ -1.2
SNHG1-225ENST00000545920 MORN1Q5T089 497 aa7.55□□□□□ -1.2
SNHG1-225ENST00000545920 ZSCAN25Q6NSZ9 544 aa7.55□□□□□ -1.2
SNHG1-225ENST00000545920 CDC37L1Q7L3B6 337 aa7.55□□□□□ -1.2
SNHG1-225ENST00000545920 DHX32Q7L7V1 743 aaKnown RBP7.55□□□□□ -1.2
SNHG1-225ENST00000545920 CEP57L1Q8IYX8 460 aa7.55□□□□□ -1.2
SNHG1-225ENST00000545920 CCDC150Q8NCX0 1101 aa7.55□□□□□ -1.2
SNHG1-225ENST00000545920 CCDC112Q8NEF3 446 aa7.55□□□□□ -1.2
SNHG1-225ENST00000545920 BICD2Q8TD16 824 aa7.55□□□□□ -1.2
SNHG1-225ENST00000545920 SUCLG2Q96I99 432 aa7.55□□□□□ -1.2
SNHG1-225ENST00000545920 NOL10Q9BSC4 688 aaKnown RBP7.55□□□□□ -1.2
SNHG1-225ENST00000545920 BICC1Q9H694 974 aaKnown RBP7.55□□□□□ -1.2
SNHG1-225ENST00000545920 CLIP2Q9UDT6 1046 aa7.55□□□□□ -1.2
SNHG1-225ENST00000545920 MAFBQ9Y5Q3 323 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-225ENST00000545920 A0A0D9SFI3 127 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 TMEM88BA6NKF7 163 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 NEURL1BA8MQ27 555 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 ACTN4O43707 911 aaKnown RBP7.54□□□□□ -1.2
SNHG1-225ENST00000545920 ZPR1O75312 459 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 LIG1P18858 919 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 FAM160A1Q05DH4 1040 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 PSME1Q06323 249 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 KMT5BQ4FZB7 885 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 LYPD8Q6UX82 237 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 TRIM67Q6ZTA4 783 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 CCDC186Q7Z3E2 898 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 BRAPQ7Z569 592 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 DRC7Q8IY82 874 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 KBTBD3Q8NAB2 608 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 PNMA1Q8ND90 353 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 KCNG4Q8TDN1 519 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 OSBPL5Q9H0X9 879 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-225ENST00000545920 LGR6Q9HBX8 967 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 CTNNA3Q9UI47 895 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 PRDM4Q9UKN5 801 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 PYCARDQ9ULZ3 195 aa7.54□□□□□ -1.2
SNHG1-225ENST00000545920 BECN2A8MW95 431 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 DGAT1O75907 488 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 YEATS4O95619 227 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 GCP02774 474 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 ZFYP08048 801 aaPredicted RBP7.53□□□□□ -1.2
SNHG1-225ENST00000545920 SNRPA1P09661 255 aaKnown RBP7.53□□□□□ -1.2
SNHG1-225ENST00000545920 TNNT1P13805 278 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 PTGS1P23219 599 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 SLC19A1P41440 591 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 SEMA3FQ13275 785 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 IQCB1Q15051 598 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 ZRSR1Q15695 479 aaKnown RBP7.53□□□□□ -1.2
SNHG1-225ENST00000545920 Q3C1V9 767 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 FOXD4L6Q3SYB3 417 aaPredicted RBP7.53□□□□□ -1.2
SNHG1-225ENST00000545920 TNNI3KQ59H18 835 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 FOXD4L3Q6VB84 417 aaPredicted RBP7.53□□□□□ -1.2
SNHG1-225ENST00000545920 ANKLE2Q86XL3 938 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 LRRC8AQ8IWT6 810 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 ELOA2Q8IYF1 753 aaPredicted RBP7.53□□□□□ -1.2
SNHG1-225ENST00000545920 NECAB1Q8N987 351 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 BRF1Q92994 677 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 LTV1Q96GA3 475 aaPredicted RBP7.53□□□□□ -1.2
SNHG1-225ENST00000545920 ERO1AQ96HE7 468 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 KAZALD1Q96I82 304 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 FAM227BQ96M60 508 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 PRR14Q9BWN1 585 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 SRRTQ9BXP5 876 aaKnown RBP7.53□□□□□ -1.2
SNHG1-225ENST00000545920 RTEL1Q9NZ71 1219 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 FPGT-TNNI3KV9GXZ4 949 aa7.53□□□□□ -1.2
SNHG1-225ENST00000545920 SALL1Q9NSC2 1324 aa7.52□□□□□ -1.2
SNHG1-225ENST00000545920 SPEF2Q9C093 1822 aa7.52□□□□□ -1.2
SNHG1-225ENST00000545920 KIF13AQ9H1H9 1805 aa7.52□□□□□ -1.2
SNHG1-225ENST00000545920 SIPA1L3O60292 1781 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-225ENST00000545920 LTN1O94822 1766 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 AP5Z1O43299 807 aa7.52□□□□□ -1.21
SNHG1-225ENST00000545920 ATP9BO43861 1147 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms