RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-208	ENST00000545831	AGBL3	Q8NEM8	1001 aa		11.98	□□□□□ -0.49
NPIPA1-208	ENST00000545831	MAST2	Q6P0Q8	1798 aa		11.97	□□□□□ -0.49
NPIPA1-208	ENST00000545831	FZD9	O00144	591 aa		11.97	□□□□□ -0.49
NPIPA1-208	ENST00000545831	USP5	P45974	858 aa		11.97	□□□□□ -0.49
NPIPA1-208	ENST00000545831	CRK	P46108	304 aa		11.97	□□□□□ -0.49
NPIPA1-208	ENST00000545831	TDO2	P48775	406 aa		11.97	□□□□□ -0.49
NPIPA1-208	ENST00000545831	MMP14	P50281	582 aa		11.97	□□□□□ -0.49
NPIPA1-208	ENST00000545831	RBM5	P52756	815 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
NPIPA1-208	ENST00000545831	IMMT	Q16891	758 aa	Known RBP	11.97	□□□□□ -0.49
NPIPA1-208	ENST00000545831	CREB3L3	Q68CJ9	461 aa		11.97	□□□□□ -0.49
NPIPA1-208	ENST00000545831	GIMAP6	Q6P9H5	292 aa		11.97	□□□□□ -0.49
NPIPA1-208	ENST00000545831	IFNL3	Q8IZI9	196 aa		11.97	□□□□□ -0.49
NPIPA1-208	ENST00000545831	NAPB	Q9H115	298 aa		11.97	□□□□□ -0.49
NPIPA1-208	ENST00000545831	SERPINA10	Q9UK55	444 aa		11.97	□□□□□ -0.49
NPIPA1-208	ENST00000545831	DAGLA	Q9Y4D2	1042 aa		11.97	□□□□□ -0.49
NPIPA1-208	ENST00000545831	GSG1L2	A8MUP6	293 aa		11.96	□□□□□ -0.49
NPIPA1-208	ENST00000545831	ZNF213	O14771	459 aa		11.96	□□□□□ -0.49
NPIPA1-208	ENST00000545831	SLC27A2	O14975	620 aa		11.96	□□□□□ -0.49
NPIPA1-208	ENST00000545831	PRKAB2	O43741	272 aa		11.96	□□□□□ -0.49
NPIPA1-208	ENST00000545831	FGA	P02671	866 aa		11.96	□□□□□ -0.49
NPIPA1-208	ENST00000545831	RPS12	P25398	132 aa	Known RBP	11.96	□□□□□ -0.49
NPIPA1-208	ENST00000545831	KRT32	Q14532	448 aa		11.96	□□□□□ -0.49
NPIPA1-208	ENST00000545831	RABEP1	Q15276	862 aa		11.96	□□□□□ -0.49
NPIPA1-208	ENST00000545831	IL27	Q8NEV9	243 aa		11.96	□□□□□ -0.49
NPIPA1-208	ENST00000545831	KCNB2	Q92953	911 aa		11.96	□□□□□ -0.49
NPIPA1-208	ENST00000545831	ZDHHC15	Q96MV8	337 aa		11.96	□□□□□ -0.49
NPIPA1-208	ENST00000545831	ATP8A2	Q9NTI2	1148 aa		11.96	□□□□□ -0.49
NPIPA1-208	ENST00000545831	COL4A5	P29400	1685 aa		11.96	□□□□□ -0.5
NPIPA1-208	ENST00000545831	ZMYM6	O95789	1325 aa		11.95	□□□□□ -0.5
NPIPA1-208	ENST00000545831	FOXP2	O15409	715 aa		11.95	□□□□□ -0.5
NPIPA1-208	ENST00000545831	USP17L8	P0C7I0	530 aa		11.95	□□□□□ -0.5
NPIPA1-208	ENST00000545831	PSMA5	P28066	241 aa		11.95	□□□□□ -0.5
NPIPA1-208	ENST00000545831	PRELP	P51888	382 aa		11.95	□□□□□ -0.5
NPIPA1-208	ENST00000545831	TSGA10IP	Q3SY00	556 aa		11.95	□□□□□ -0.5
NPIPA1-208	ENST00000545831	TEX11	Q8IYF3	940 aa		11.95	□□□□□ -0.5
NPIPA1-208	ENST00000545831	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.95	□□□□□ -0.5
NPIPA1-208	ENST00000545831	SDR42E1	Q8WUS8	393 aa		11.95	□□□□□ -0.5
NPIPA1-208	ENST00000545831	GML	Q99445	158 aa		11.95	□□□□□ -0.5
NPIPA1-208	ENST00000545831	USP40	Q9NVE5	1235 aa		11.95	□□□□□ -0.5
NPIPA1-208	ENST00000545831	RNF181	Q9P0P0	153 aa		11.95	□□□□□ -0.5
NPIPA1-208	ENST00000545831	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.95	□□□□□ -0.5
NPIPA1-208	ENST00000545831	SNX14	Q9Y5W7	946 aa		11.95	□□□□□ -0.5
NPIPA1-208	ENST00000545831	GJA3	Q9Y6H8	435 aa		11.95	□□□□□ -0.5
NPIPA1-208	ENST00000545831	SCN9A	Q15858	1988 aa		11.95	□□□□□ -0.5
NPIPA1-208	ENST00000545831	CYP21A2	P08686	494 aa		11.94	□□□□□ -0.5
NPIPA1-208	ENST00000545831	DLGAP5	Q15398	846 aa		11.94	□□□□□ -0.5
NPIPA1-208	ENST00000545831	CFAP100	Q494V2	611 aa		11.94	□□□□□ -0.5
NPIPA1-208	ENST00000545831	AMOTL1	Q8IY63	956 aa		11.94	□□□□□ -0.5
NPIPA1-208	ENST00000545831	TGFBRAP1	Q8WUH2	860 aa		11.94	□□□□□ -0.5
NPIPA1-208	ENST00000545831	DPF2	Q92785	391 aa		11.94	□□□□□ -0.5
NPIPA1-208	ENST00000545831	IL17RA	Q96F46	866 aa		11.94	□□□□□ -0.5
NPIPA1-208	ENST00000545831	PALD1	Q9ULE6	856 aa		11.94	□□□□□ -0.5
NPIPA1-208	ENST00000545831	MYH2	Q9UKX2	1941 aa		11.94	□□□□□ -0.5
NPIPA1-208	ENST00000545831	RHBDL3	P58872	404 aa		11.93	□□□□□ -0.5
NPIPA1-208	ENST00000545831	C9orf131	Q5VYM1	1079 aa		11.93	□□□□□ -0.5
NPIPA1-208	ENST00000545831	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.93	□□□□□ -0.5
NPIPA1-208	ENST00000545831	RASEF	Q8IZ41	740 aa		11.93	□□□□□ -0.5
NPIPA1-208	ENST00000545831	JAKMIP1	Q96N16	626 aa	Known RBP	11.93	□□□□□ -0.5
NPIPA1-208	ENST00000545831	KIF2C	Q99661	725 aa		11.93	□□□□□ -0.5
NPIPA1-208	ENST00000545831	TM6SF1	Q9BZW5	370 aa		11.93	□□□□□ -0.5
NPIPA1-208	ENST00000545831	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.93	□□□□□ -0.5
NPIPA1-208	ENST00000545831	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.93	□□□□□ -0.5
NPIPA1-208	ENST00000545831	TMOD2	Q9NZR1	351 aa		11.93	□□□□□ -0.5
NPIPA1-208	ENST00000545831	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.93	□□□□□ -0.5
NPIPA1-208	ENST00000545831	PSME4	Q14997	1843 aa		11.93	□□□□□ -0.5
NPIPA1-208	ENST00000545831	DCAF8L1	A6NGE4	600 aa		11.92	□□□□□ -0.5
NPIPA1-208	ENST00000545831	MINDY4B	A8MYZ0	360 aa		11.92	□□□□□ -0.5
NPIPA1-208	ENST00000545831	ST18	O60284	1047 aa		11.92	□□□□□ -0.5
NPIPA1-208	ENST00000545831	SLC3A2	P08195	630 aa	Known RBP	11.92	□□□□□ -0.5
NPIPA1-208	ENST00000545831	HMGB1	P09429	215 aa	Known RBP	11.92	□□□□□ -0.5
NPIPA1-208	ENST00000545831	GMPS	P49915	693 aa	Predicted RBP	11.92	□□□□□ -0.5
NPIPA1-208	ENST00000545831	HAND2	P61296	217 aa		11.92	□□□□□ -0.5
NPIPA1-208	ENST00000545831	TRDN	Q13061	729 aa		11.92	□□□□□ -0.5
NPIPA1-208	ENST00000545831	CDC42EP5	Q6NZY7	148 aa		11.92	□□□□□ -0.5
NPIPA1-208	ENST00000545831	PPP4R3CP	Q6ZMV5	832 aa		11.92	□□□□□ -0.5
NPIPA1-208	ENST00000545831	GPC2	Q8N158	579 aa		11.92	□□□□□ -0.5
NPIPA1-208	ENST00000545831	NEK1	Q96PY6	1258 aa		11.92	□□□□□ -0.5
NPIPA1-208	ENST00000545831	MCM9	Q9NXL9	1143 aa		11.92	□□□□□ -0.5
NPIPA1-208	ENST00000545831	ZNF541	Q9H0D2	1346 aa		11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	USP17L12	C9JPN9	530 aa		11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	USP17L21	D6R901	530 aa		11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831		E7EWF7	191 aa		11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831		H7C1D1	291 aa		11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	MYO1B	O43795	1136 aa		11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	POLR3D	P05423	398 aa	Predicted RBP	11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	CAST	P20810	708 aa	Known RBP	11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	NEK4	P51957	841 aa		11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	PPARA	Q07869	468 aa		11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	BECN1	Q14457	450 aa		11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	SBK1	Q52WX2	424 aa		11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	DPY19L2	Q6NUT2	758 aa		11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	CTR9	Q6PD62	1173 aa		11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	BLOC1S2	Q6QNY1	142 aa		11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	RALYL	Q86SE5	291 aa	Known RBP	11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	MAPKAPK5	Q8IW41	473 aa		11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	MTMR14	Q8NCE2	650 aa		11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	RNF41	Q9H4P4	317 aa	Predicted RBP	11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	CNOT7	Q9UIV1	285 aa	Known RBP	11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	CYP46A1	Q9Y6A2	500 aa		11.91	□□□□□ -0.5
NPIPA1-208	ENST00000545831	SPDYE2B	A6NHP3	402 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms