RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 OSBPL5Q9H0X9 879 aaPredicted RBP18.3■□□□□ 0.52
LDLR-204ENST00000545707 PLEKHG2Q9H7P9 1386 aa18.3■□□□□ 0.52
LDLR-204ENST00000545707 ZMYM6O95789 1325 aa18.3■□□□□ 0.52
LDLR-204ENST00000545707 HSPA2P54652 639 aa18.3■□□□□ 0.52
LDLR-204ENST00000545707 SPECC1Q5M775 1068 aa18.3■□□□□ 0.52
LDLR-204ENST00000545707 GIGYF2Q6Y7W6 1299 aaKnown RBP18.3■□□□□ 0.52
LDLR-204ENST00000545707 NFXL1Q6ZNB6 911 aa18.3■□□□□ 0.52
LDLR-204ENST00000545707 CARD10Q9BWT7 1032 aa18.3■□□□□ 0.52
LDLR-204ENST00000545707 COL5A2P05997 1499 aaPredicted RBP18.29■□□□□ 0.52
LDLR-204ENST00000545707 CTDSPL2Q05D32 466 aa18.29■□□□□ 0.52
LDLR-204ENST00000545707 CCDC102BQ68D86 513 aa18.29■□□□□ 0.52
LDLR-204ENST00000545707 STRCP1A6NGW2 1772 aa18.29■□□□□ 0.52
LDLR-204ENST00000545707 TNS2Q63HR2 1409 aa18.29■□□□□ 0.52
LDLR-204ENST00000545707 UBR2Q8IWV8 1755 aa18.29■□□□□ 0.52
LDLR-204ENST00000545707 ANKRD18BA2A2Z9 1011 aa18.29■□□□□ 0.52
LDLR-204ENST00000545707 IRS4O14654 1257 aaPredicted RBP18.29■□□□□ 0.52
LDLR-204ENST00000545707 RANBP6O60518 1105 aaKnown RBP18.29■□□□□ 0.52
LDLR-204ENST00000545707 PDE6AP16499 860 aa18.29■□□□□ 0.52
LDLR-204ENST00000545707 GSDMDP57764 484 aa18.29■□□□□ 0.52
LDLR-204ENST00000545707 DPF2Q92785 391 aa18.29■□□□□ 0.52
LDLR-204ENST00000545707 HSD3B7Q9H2F3 369 aa18.29■□□□□ 0.52
LDLR-204ENST00000545707 TRMT112Q9UI30 125 aaKnown RBP18.29■□□□□ 0.52
LDLR-204ENST00000545707 SPEF2Q9C093 1822 aa18.29■□□□□ 0.52
LDLR-204ENST00000545707 MAP3K15Q6ZN16 1313 aa18.28■□□□□ 0.52
LDLR-204ENST00000545707 CTSWP56202 376 aa18.28■□□□□ 0.52
LDLR-204ENST00000545707 FANCCQ00597 558 aa18.28■□□□□ 0.52
LDLR-204ENST00000545707 GOLGA8FQ08AF8 430 aa18.28■□□□□ 0.52
LDLR-204ENST00000545707 GOLGA8DPQ0D2H9 430 aa18.28■□□□□ 0.52
LDLR-204ENST00000545707 VGLL2Q8N8G2 317 aa18.28■□□□□ 0.52
LDLR-204ENST00000545707 BPIFA3Q9BQP9 254 aa18.28■□□□□ 0.52
LDLR-204ENST00000545707 TACC3Q9Y6A5 838 aa18.28■□□□□ 0.52
LDLR-204ENST00000545707 PARP4Q9UKK3 1724 aaKnown RBP18.28■□□□□ 0.52
LDLR-204ENST00000545707 DMTNQ08495 405 aa18.28■□□□□ 0.52
LDLR-204ENST00000545707 PTPAQ15257 358 aa18.28■□□□□ 0.52
LDLR-204ENST00000545707 HSP90AA4PQ58FG1 418 aa18.28■□□□□ 0.52
LDLR-204ENST00000545707 CCDC82Q8N4S0 544 aa18.28■□□□□ 0.52
LDLR-204ENST00000545707 IGDCC4Q8TDY8 1250 aa18.28■□□□□ 0.52
LDLR-204ENST00000545707 FAM217BQ9NTX9 383 aaPredicted RBP18.28■□□□□ 0.52
LDLR-204ENST00000545707 ZBTB43O43298 467 aa18.27■□□□□ 0.52
LDLR-204ENST00000545707 PDE8BO95263 885 aa18.27■□□□□ 0.52
LDLR-204ENST00000545707 STARD3NLO95772 234 aa18.27■□□□□ 0.52
LDLR-204ENST00000545707 SFPQP23246 707 aaKnown RBP eCLIP18.27■□□□□ 0.52
LDLR-204ENST00000545707 SYCP1Q15431 976 aa18.27■□□□□ 0.52
LDLR-204ENST00000545707 TBC1D2BQ9UPU7 963 aa18.27■□□□□ 0.52
LDLR-204ENST00000545707 DCCP43146 1447 aa18.27■□□□□ 0.51
LDLR-204ENST00000545707 FOXN1O15353 648 aa18.27■□□□□ 0.51
LDLR-204ENST00000545707 NTRK3Q16288 839 aa18.27■□□□□ 0.51
LDLR-204ENST00000545707 TMEM67Q5HYA8 995 aa18.27■□□□□ 0.51
LDLR-204ENST00000545707 KIF18AQ8NI77 898 aa18.27■□□□□ 0.51
LDLR-204ENST00000545707 AIDAQ96BJ3 306 aa18.27■□□□□ 0.51
LDLR-204ENST00000545707 PPP1R13BQ96KQ4 1090 aa18.27■□□□□ 0.51
LDLR-204ENST00000545707 SLC4A9Q96Q91 983 aa18.27■□□□□ 0.51
LDLR-204ENST00000545707 IMPACTQ9P2X3 320 aa18.27■□□□□ 0.51
LDLR-204ENST00000545707 GOLGA8AA7E2F4 631 aa18.26■□□□□ 0.51
LDLR-204ENST00000545707 GUCY1A2P33402 732 aa18.26■□□□□ 0.51
LDLR-204ENST00000545707 IARSP41252 1262 aaKnown RBP18.26■□□□□ 0.51
LDLR-204ENST00000545707 ELF2Q15723 593 aa18.26■□□□□ 0.51
LDLR-204ENST00000545707 LONRF3Q496Y0 759 aa18.26■□□□□ 0.51
LDLR-204ENST00000545707 SYT10Q6XYQ8 523 aa18.26■□□□□ 0.51
LDLR-204ENST00000545707 FOXP4Q8IVH2 680 aaPredicted RBP18.26■□□□□ 0.51
LDLR-204ENST00000545707 CMTR1Q8N1G2 835 aaKnown RBP18.26■□□□□ 0.51
LDLR-204ENST00000545707 STRBPQ96SI9 672 aaKnown RBP18.26■□□□□ 0.51
LDLR-204ENST00000545707 MAP3K14Q99558 947 aa18.26■□□□□ 0.51
LDLR-204ENST00000545707 ZKSCAN3Q9BRR0 538 aa18.26■□□□□ 0.51
LDLR-204ENST00000545707 SLC26A6Q9BXS9 759 aa18.26■□□□□ 0.51
LDLR-204ENST00000545707 LY9Q9HBG7 655 aa18.26■□□□□ 0.51
LDLR-204ENST00000545707 ZSWIM5Q9P217 1185 aa18.26■□□□□ 0.51
LDLR-204ENST00000545707 LRRN4CLQ8ND94 238 aa18.25■□□□□ 0.51
LDLR-204ENST00000545707 EPB41L4AQ9HCS5 686 aaPredicted RBP18.25■□□□□ 0.51
LDLR-204ENST00000545707 HPSEQ9Y251 543 aa18.25■□□□□ 0.51
LDLR-204ENST00000545707 ZBTB1Q9Y2K1 713 aa18.25■□□□□ 0.51
LDLR-204ENST00000545707 UBN2Q6ZU65 1347 aa18.25■□□□□ 0.51
LDLR-204ENST00000545707 WDR19Q8NEZ3 1342 aa18.25■□□□□ 0.51
LDLR-204ENST00000545707 TCRBV5S4A2TA0A5A2 114 aa18.25■□□□□ 0.51
LDLR-204ENST00000545707 UBE3CQ15386 1083 aa18.25■□□□□ 0.51
LDLR-204ENST00000545707 KMT5BQ4FZB7 885 aa18.25■□□□□ 0.51
LDLR-204ENST00000545707 RRP12Q5JTH9 1297 aaKnown RBP18.25■□□□□ 0.51
LDLR-204ENST00000545707 ARMT1Q9H993 441 aa18.25■□□□□ 0.51
LDLR-204ENST00000545707 CGNQ9P2M7 1197 aaKnown RBP18.25■□□□□ 0.51
LDLR-204ENST00000545707 PRKAB2O43741 272 aa18.24■□□□□ 0.51
LDLR-204ENST00000545707 TPM4P67936 248 aa18.24■□□□□ 0.51
LDLR-204ENST00000545707 TTF1Q15361 905 aaPredicted RBP18.24■□□□□ 0.51
LDLR-204ENST00000545707 METTL16Q86W50 562 aaKnown RBP18.24■□□□□ 0.51
LDLR-204ENST00000545707 MAGEB6Q8N7X4 407 aa18.24■□□□□ 0.51
LDLR-204ENST00000545707 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.24■□□□□ 0.51
LDLR-204ENST00000545707 KCNJ14Q9UNX9 436 aa18.24■□□□□ 0.51
LDLR-204ENST00000545707 IFIT3O14879 490 aaKnown RBP18.24■□□□□ 0.51
LDLR-204ENST00000545707 CDKL5O76039 1030 aa18.24■□□□□ 0.51
LDLR-204ENST00000545707 SERPINC1P01008 464 aa18.24■□□□□ 0.51
LDLR-204ENST00000545707 GRIN1Q05586 938 aa18.24■□□□□ 0.51
LDLR-204ENST00000545707 CPLX2Q6PUV4 134 aaKnown RBP18.24■□□□□ 0.51
LDLR-204ENST00000545707 TOMM22Q9NS69 142 aa18.24■□□□□ 0.51
LDLR-204ENST00000545707 TUBE1Q9UJT0 475 aa18.24■□□□□ 0.51
LDLR-204ENST00000545707 TMEM232C9JQI7 657 aa18.23■□□□□ 0.51
LDLR-204ENST00000545707 MBD4O95243 580 aa18.23■□□□□ 0.51
LDLR-204ENST00000545707 UBASH3AP57075 661 aa18.23■□□□□ 0.51
LDLR-204ENST00000545707 CCDC150Q8NCX0 1101 aa18.23■□□□□ 0.51
LDLR-204ENST00000545707 ABCC12Q96J65 1359 aa18.23■□□□□ 0.51
LDLR-204ENST00000545707 CDHR2Q9BYE9 1310 aa18.23■□□□□ 0.51
LDLR-204ENST00000545707 BTBD18B2RXH4 712 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms