RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 FOXD4L1Q9NU39 408 aa16.5■□□□□ 0.23
SP140-213ENST00000543928 GPR75-ASB3A0A0A6YYF3 556 aa16.49■□□□□ 0.23
SP140-213ENST00000543928 TRIM6-TRIM34B2RNG4 842 aa16.49■□□□□ 0.23
SP140-213ENST00000543928 BTDP43251 543 aa16.49■□□□□ 0.23
SP140-213ENST00000543928 SPDYE2Q495Y8 402 aa16.49■□□□□ 0.23
SP140-213ENST00000543928 TTC22Q5TAA0 569 aa16.49■□□□□ 0.23
SP140-213ENST00000543928 ZSCAN25Q6NSZ9 544 aa16.49■□□□□ 0.23
SP140-213ENST00000543928 TMED8Q6PL24 325 aaPredicted RBP16.49■□□□□ 0.23
SP140-213ENST00000543928 RBM46Q8TBY0 533 aaKnown RBP16.49■□□□□ 0.23
SP140-213ENST00000543928 DCPSQ96C86 337 aaKnown RBP16.49■□□□□ 0.23
SP140-213ENST00000543928 FSD1Q9BTV5 496 aa16.49■□□□□ 0.23
SP140-213ENST00000543928 VEZTQ9HBM0 779 aa16.49■□□□□ 0.23
SP140-213ENST00000543928 ZNF70Q9UC06 446 aaPredicted RBP16.49■□□□□ 0.23
SP140-213ENST00000543928 ZNF532Q9HCE3 1301 aa16.48■□□□□ 0.23
SP140-213ENST00000543928 ECM29Q5VYK3 1845 aa16.48■□□□□ 0.23
SP140-213ENST00000543928 ADD2P35612 726 aa16.48■□□□□ 0.23
SP140-213ENST00000543928 RGS3P49796 1198 aa16.48■□□□□ 0.23
SP140-213ENST00000543928 SLFNL1Q499Z3 407 aa16.48■□□□□ 0.23
SP140-213ENST00000543928 CDC42EP5Q6NZY7 148 aa16.48■□□□□ 0.23
SP140-213ENST00000543928 CNTROBQ8N137 903 aa16.48■□□□□ 0.23
SP140-213ENST00000543928 SMC1BQ8NDV3 1235 aa16.48■□□□□ 0.23
SP140-213ENST00000543928 NOL10Q9BSC4 688 aaKnown RBP16.48■□□□□ 0.23
SP140-213ENST00000543928 USP40Q9NVE5 1235 aa16.48■□□□□ 0.23
SP140-213ENST00000543928 MYH7P12883 1935 aa16.48■□□□□ 0.23
SP140-213ENST00000543928 POLR2AP24928 1970 aaKnown RBP16.47■□□□□ 0.23
SP140-213ENST00000543928 PITPNM2Q9BZ72 1349 aa16.47■□□□□ 0.23
SP140-213ENST00000543928 TCRBV5S4A2TA0A5A2 114 aa16.47■□□□□ 0.23
SP140-213ENST00000543928 BAG3O95817 575 aa16.47■□□□□ 0.23
SP140-213ENST00000543928 CHGBP05060 677 aa16.47■□□□□ 0.23
SP140-213ENST00000543928 GSPT1P15170 499 aaKnown RBP16.47■□□□□ 0.23
SP140-213ENST00000543928 CACNB3P54284 484 aa16.47■□□□□ 0.23
SP140-213ENST00000543928 UBE3CQ15386 1083 aa16.47■□□□□ 0.23
SP140-213ENST00000543928 APOBEC3FQ8IUX4 373 aaKnown RBP16.47■□□□□ 0.23
SP140-213ENST00000543928 MIGA1Q8NAN2 632 aa16.47■□□□□ 0.23
SP140-213ENST00000543928 RILPL2Q969X0 211 aa16.47■□□□□ 0.23
SP140-213ENST00000543928 GLIS2Q9BZE0 524 aaPredicted RBP16.47■□□□□ 0.23
SP140-213ENST00000543928 AATFQ9NY61 560 aaKnown RBP eCLIP16.47■□□□□ 0.23
SP140-213ENST00000543928 TMOD2Q9NZR1 351 aa16.47■□□□□ 0.23
SP140-213ENST00000543928 SCAF8Q9UPN6 1271 aaKnown RBP16.47■□□□□ 0.23
SP140-213ENST00000543928 RNF113AO15541 343 aaKnown RBP16.46■□□□□ 0.23
SP140-213ENST00000543928 ZFYP08048 801 aaPredicted RBP16.46■□□□□ 0.23
SP140-213ENST00000543928 LRRFIP1Q32MZ4 808 aaKnown RBP16.46■□□□□ 0.23
SP140-213ENST00000543928 CDC37L1Q7L3B6 337 aa16.46■□□□□ 0.23
SP140-213ENST00000543928 KRT26Q7Z3Y9 468 aa16.46■□□□□ 0.23
SP140-213ENST00000543928 SULF1Q8IWU6 871 aa16.46■□□□□ 0.23
SP140-213ENST00000543928 GTF3C3Q9Y5Q9 886 aa16.46■□□□□ 0.23
SP140-213ENST00000543928 TCP10L2B9ZVM9 353 aa16.45■□□□□ 0.22
SP140-213ENST00000543928 ADM5C9JUS6 153 aa16.45■□□□□ 0.22
SP140-213ENST00000543928 RHBDL3P58872 404 aa16.45■□□□□ 0.22
SP140-213ENST00000543928 PPP4CP60510 307 aa16.45■□□□□ 0.22
SP140-213ENST00000543928 DYNLL1P63167 89 aaKnown RBP16.45■□□□□ 0.22
SP140-213ENST00000543928 USP48Q86UV5 1035 aa16.45■□□□□ 0.22
SP140-213ENST00000543928 MAGEB6P1A0A0J9YX57 407 aa16.44■□□□□ 0.22
SP140-213ENST00000543928 PLCG2P16885 1265 aa16.44■□□□□ 0.22
SP140-213ENST00000543928 SDSP20132 328 aa16.44■□□□□ 0.22
SP140-213ENST00000543928 FSTL1Q12841 308 aa16.44■□□□□ 0.22
SP140-213ENST00000543928 NFIAQ12857 509 aa16.44■□□□□ 0.22
SP140-213ENST00000543928 TNFAIP1Q13829 316 aa16.44■□□□□ 0.22
SP140-213ENST00000543928 DLK2Q6UY11 383 aa16.44■□□□□ 0.22
SP140-213ENST00000543928 SH3RF3Q8TEJ3 882 aaPredicted RBP16.44■□□□□ 0.22
SP140-213ENST00000543928 AK9Q5TCS8 1911 aa16.43■□□□□ 0.22
SP140-213ENST00000543928 RFX7Q2KHR2 1363 aa16.43■□□□□ 0.22
SP140-213ENST00000543928 TRAF5O00463 557 aa16.43■□□□□ 0.22
SP140-213ENST00000543928 ITGBL1O95965 494 aaPredicted RBP16.43■□□□□ 0.22
SP140-213ENST00000543928 TNNI2P48788 182 aa16.43■□□□□ 0.22
SP140-213ENST00000543928 FKBP1CQ5VVH2 108 aa16.43■□□□□ 0.22
SP140-213ENST00000543928 CERS3Q8IU89 383 aa16.43■□□□□ 0.22
SP140-213ENST00000543928 TEX11Q8IYF3 940 aa16.43■□□□□ 0.22
SP140-213ENST00000543928 APPBP2Q92624 585 aa16.43■□□□□ 0.22
SP140-213ENST00000543928 RIOK1Q9BRS2 568 aaKnown RBP16.43■□□□□ 0.22
SP140-213ENST00000543928 PUS7LQ9H0K6 701 aaKnown RBP16.43■□□□□ 0.22
SP140-213ENST00000543928 DEFB129Q9H1M3 183 aa16.43■□□□□ 0.22
SP140-213ENST00000543928 CNTNAP1P78357 1384 aa16.42■□□□□ 0.22
SP140-213ENST00000543928 WDHD1O75717 1129 aaPredicted RBP16.42■□□□□ 0.22
SP140-213ENST00000543928 MBD4O95243 580 aa16.42■□□□□ 0.22
SP140-213ENST00000543928 RASA3Q14644 834 aa16.42■□□□□ 0.22
SP140-213ENST00000543928 ZMYM1Q5SVZ6 1142 aa16.42■□□□□ 0.22
SP140-213ENST00000543928 TICAM2Q86XR7 235 aa16.42■□□□□ 0.22
SP140-213ENST00000543928 LCORLQ8N3X6 602 aa16.42■□□□□ 0.22
SP140-213ENST00000543928 OSBP2Q969R2 916 aa16.42■□□□□ 0.22
SP140-213ENST00000543928 IDI2Q9BXS1 227 aa16.42■□□□□ 0.22
SP140-213ENST00000543928 ARMT1Q9H993 441 aa16.42■□□□□ 0.22
SP140-213ENST00000543928 FAM198AQ9UFP1 575 aa16.42■□□□□ 0.22
SP140-213ENST00000543928 FMR1Q06787 632 aaKnown RBP eCLIP16.41■□□□□ 0.22
SP140-213ENST00000543928 TCP10Q12799 353 aa16.41■□□□□ 0.22
SP140-213ENST00000543928 PICALMQ13492 652 aa16.41■□□□□ 0.22
SP140-213ENST00000543928 PRAMEF18Q5VWM3 479 aa16.41■□□□□ 0.22
SP140-213ENST00000543928 FAM83AQ86UY5 434 aa16.41■□□□□ 0.22
SP140-213ENST00000543928 AIDAQ96BJ3 306 aa16.41■□□□□ 0.22
SP140-213ENST00000543928 DDX4Q9NQI0 724 aaKnown RBP16.41■□□□□ 0.22
SP140-213ENST00000543928 PPP2R3BQ9Y5P8 575 aa16.41■□□□□ 0.22
SP140-213ENST00000543928 M0R2C6 588 aa16.4■□□□□ 0.22
SP140-213ENST00000543928 ENTPD3O75355 529 aa16.4■□□□□ 0.22
SP140-213ENST00000543928 NMIQ13287 307 aaPredicted RBP16.4■□□□□ 0.22
SP140-213ENST00000543928 BMP2KLQ5H9B9 411 aa16.4■□□□□ 0.22
SP140-213ENST00000543928 TGFBRAP1Q8WUH2 860 aa16.4■□□□□ 0.22
SP140-213ENST00000543928 CDCA5Q96FF9 252 aa16.4■□□□□ 0.22
SP140-213ENST00000543928 SEC62Q99442 399 aaKnown RBP16.4■□□□□ 0.22
SP140-213ENST00000543928 CRNKL1Q9BZJ0 848 aaKnown RBP16.4■□□□□ 0.22
SP140-213ENST00000543928 TMEM39BQ9GZU3 492 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms