RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 PDE4AP27815 886 aa7.63□□□□□ -1.19
LTBR-212ENST00000543542 TNFAIP1Q13829 316 aa7.63□□□□□ -1.19
LTBR-212ENST00000543542 CDC37L1Q7L3B6 337 aa7.63□□□□□ -1.19
LTBR-212ENST00000543542 KRT26Q7Z3Y9 468 aa7.63□□□□□ -1.19
LTBR-212ENST00000543542 USP48Q86UV5 1035 aa7.63□□□□□ -1.19
LTBR-212ENST00000543542 KBTBD3Q8NAB2 608 aa7.63□□□□□ -1.19
LTBR-212ENST00000543542 MIGA1Q8NAN2 632 aa7.63□□□□□ -1.19
LTBR-212ENST00000543542 MTMR14Q8NCE2 650 aa7.63□□□□□ -1.19
LTBR-212ENST00000543542 EVI5LQ96CN4 794 aa7.63□□□□□ -1.19
LTBR-212ENST00000543542 ZDHHC15Q96MV8 337 aa7.63□□□□□ -1.19
LTBR-212ENST00000543542 MRIQ9BWK5 157 aa7.63□□□□□ -1.19
LTBR-212ENST00000543542 AATFQ9NY61 560 aaKnown RBP eCLIP7.63□□□□□ -1.19
LTBR-212ENST00000543542 ZNF70Q9UC06 446 aaPredicted RBP7.63□□□□□ -1.19
LTBR-212ENST00000543542 SCAF8Q9UPN6 1271 aaKnown RBP7.63□□□□□ -1.19
LTBR-212ENST00000543542 POLR2AP24928 1970 aaKnown RBP7.62□□□□□ -1.19
LTBR-212ENST00000543542 PITPNM2Q9BZ72 1349 aa7.62□□□□□ -1.19
LTBR-212ENST00000543542 ZNF532Q9HCE3 1301 aa7.62□□□□□ -1.19
LTBR-212ENST00000543542 ADM5C9JUS6 153 aa7.62□□□□□ -1.19
LTBR-212ENST00000543542 ZFYP08048 801 aaPredicted RBP7.62□□□□□ -1.19
LTBR-212ENST00000543542 PLCG2P16885 1265 aa7.62□□□□□ -1.19
LTBR-212ENST00000543542 NF2P35240 595 aa7.62□□□□□ -1.19
LTBR-212ENST00000543542 USP5P45974 858 aa7.62□□□□□ -1.19
LTBR-212ENST00000543542 CACNB3P54284 484 aa7.62□□□□□ -1.19
LTBR-212ENST00000543542 FSTL1Q12841 308 aa7.62□□□□□ -1.19
LTBR-212ENST00000543542 PICALMQ13492 652 aa7.62□□□□□ -1.19
LTBR-212ENST00000543542 TTLL12Q14166 644 aaPredicted RBP7.62□□□□□ -1.19
LTBR-212ENST00000543542 CDC42EP5Q6NZY7 148 aa7.62□□□□□ -1.19
LTBR-212ENST00000543542 TMED8Q6PL24 325 aaPredicted RBP7.62□□□□□ -1.19
LTBR-212ENST00000543542 ZSCAN29Q8IWY8 852 aaPredicted RBP7.62□□□□□ -1.19
LTBR-212ENST00000543542 TEX11Q8IYF3 940 aa7.62□□□□□ -1.19
LTBR-212ENST00000543542 AIDAQ96BJ3 306 aa7.62□□□□□ -1.19
LTBR-212ENST00000543542 FAM163AQ96GL9 167 aaPredicted RBP7.62□□□□□ -1.19
LTBR-212ENST00000543542 GLIS2Q9BZE0 524 aaPredicted RBP7.62□□□□□ -1.19
LTBR-212ENST00000543542 OSBPL3Q9H4L5 887 aa7.62□□□□□ -1.19
LTBR-212ENST00000543542 GAKO14976 1311 aa7.61□□□□□ -1.19
LTBR-212ENST00000543542 GPR75-ASB3A0A0A6YYF3 556 aa7.61□□□□□ -1.19
LTBR-212ENST00000543542 RNF113AO15541 343 aaKnown RBP7.61□□□□□ -1.19
LTBR-212ENST00000543542 ADD2P35612 726 aa7.61□□□□□ -1.19
LTBR-212ENST00000543542 DYNLL1P63167 89 aaKnown RBP7.61□□□□□ -1.19
LTBR-212ENST00000543542 TCP10Q12799 353 aa7.61□□□□□ -1.19
LTBR-212ENST00000543542 SPDYE2Q495Y8 402 aa7.61□□□□□ -1.19
LTBR-212ENST00000543542 TTC22Q5TAA0 569 aa7.61□□□□□ -1.19
LTBR-212ENST00000543542 APOBEC3HQ6NTF7 200 aaKnown RBP7.61□□□□□ -1.19
LTBR-212ENST00000543542 CERS3Q8IU89 383 aa7.61□□□□□ -1.19
LTBR-212ENST00000543542 SH3RF3Q8TEJ3 882 aaPredicted RBP7.61□□□□□ -1.19
LTBR-212ENST00000543542 DDRGK1Q96HY6 314 aa7.61□□□□□ -1.19
LTBR-212ENST00000543542 ZBED3Q96IU2 234 aaPredicted RBP7.61□□□□□ -1.19
LTBR-212ENST00000543542 DEFB129Q9H1M3 183 aa7.61□□□□□ -1.19
LTBR-212ENST00000543542 DIAPH3Q9NSV4 1193 aa7.61□□□□□ -1.19
LTBR-212ENST00000543542 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.61□□□□□ -1.19
LTBR-212ENST00000543542 PGAP2Q9UHJ9 254 aa7.61□□□□□ -1.19
LTBR-212ENST00000543542 HIP1O00291 1037 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 TRAF5O00463 557 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 MBD4O95243 580 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 PRKG1Q13976 671 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 RASA3Q14644 834 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 UBE3CQ15386 1083 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 SLFNL1Q499Z3 407 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 PRAMEF18Q5VWM3 479 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 ADGRA1Q86SQ6 560 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 SKAP1Q86WV1 359 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 ZNF384Q8TF68 577 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 TGFBRAP1Q8WUH2 860 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 APPBP2Q92624 585 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 CDCA5Q96FF9 252 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 TRIM34Q9BYJ4 488 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 CRNKL1Q9BZJ0 848 aaKnown RBP7.6□□□□□ -1.19
LTBR-212ENST00000543542 ARMT1Q9H993 441 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 PPP2R3BQ9Y5P8 575 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 GTF3C3Q9Y5Q9 886 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 TRPM7Q96QT4 1865 aa7.6□□□□□ -1.19
LTBR-212ENST00000543542 TCRBV5S4A2TA0A5A2 114 aa7.59□□□□□ -1.19
LTBR-212ENST00000543542 CELF2O95319 508 aaKnown RBP7.59□□□□□ -1.19
LTBR-212ENST00000543542 APPP05067 770 aa7.59□□□□□ -1.19
LTBR-212ENST00000543542 PPP4CP60510 307 aa7.59□□□□□ -1.19
LTBR-212ENST00000543542 C1QTNF8P60827 252 aa7.59□□□□□ -1.19
LTBR-212ENST00000543542 FMR1Q06787 632 aaKnown RBP eCLIP7.59□□□□□ -1.19
LTBR-212ENST00000543542 NFIAQ12857 509 aa7.59□□□□□ -1.19
LTBR-212ENST00000543542 SUPT20HL1Q3ZLR7 823 aa7.59□□□□□ -1.19
LTBR-212ENST00000543542 DLK2Q6UY11 383 aa7.59□□□□□ -1.19
LTBR-212ENST00000543542 PAXIP1Q6ZW49 1069 aaPredicted RBP7.59□□□□□ -1.19
LTBR-212ENST00000543542 FAM83AQ86UY5 434 aa7.59□□□□□ -1.19
LTBR-212ENST00000543542 MAPKAPK5Q8IW41 473 aa7.59□□□□□ -1.19
LTBR-212ENST00000543542 AMOTL1Q8IY63 956 aa7.59□□□□□ -1.19
LTBR-212ENST00000543542 C2orf69Q8N8R5 385 aa7.59□□□□□ -1.19
LTBR-212ENST00000543542 FAM151AQ8WW52 585 aa7.59□□□□□ -1.19
LTBR-212ENST00000543542 HOOK2Q96ED9 719 aa7.59□□□□□ -1.19
LTBR-212ENST00000543542 TMEM39BQ9GZU3 492 aa7.59□□□□□ -1.19
LTBR-212ENST00000543542 ABT1Q9ULW3 272 aaKnown RBP7.59□□□□□ -1.19
LTBR-212ENST00000543542 SLC4A4Q9Y6R1 1079 aa7.59□□□□□ -1.19
LTBR-212ENST00000543542 NAV1Q8NEY1 1877 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 CDK5RAP2Q96SN8 1893 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 TMEM88BA6NKF7 163 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 PPP1R12BO60237 982 aaPredicted RBP7.58□□□□□ -1.2
LTBR-212ENST00000543542 ENTPD3O75355 529 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 ITGBL1O95965 494 aaPredicted RBP7.58□□□□□ -1.2
LTBR-212ENST00000543542 CHGBP05060 677 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 POLR3DP05423 398 aaPredicted RBP7.58□□□□□ -1.2
LTBR-212ENST00000543542 HLA-DOAP06340 250 aa7.58□□□□□ -1.2
LTBR-212ENST00000543542 GSPT1P15170 499 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms