RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 A0A087WUV0 522 aaPredicted RBP11.12□□□□□ -0.63
TCF4-208ENST00000543082 LOC102724159A0A0B4J2E5 919 aa11.12□□□□□ -0.63
TCF4-208ENST00000543082 EIF5P55010 431 aaKnown RBP11.12□□□□□ -0.63
TCF4-208ENST00000543082 TEFQ10587 303 aa11.12□□□□□ -0.63
TCF4-208ENST00000543082 SLC39A14Q15043 492 aa11.12□□□□□ -0.63
TCF4-208ENST00000543082 PWP2Q15269 919 aaKnown RBP11.12□□□□□ -0.63
TCF4-208ENST00000543082 NBPF6Q5VWK0 638 aa11.12□□□□□ -0.63
TCF4-208ENST00000543082 TADA2BQ86TJ2 420 aa11.12□□□□□ -0.63
TCF4-208ENST00000543082 NBPF4Q96M43 638 aa11.12□□□□□ -0.63
TCF4-208ENST00000543082 MRPL44Q9H9J2 332 aaKnown RBP11.12□□□□□ -0.63
TCF4-208ENST00000543082 PUF60Q9UHX1 559 aaKnown RBP11.12□□□□□ -0.63
TCF4-208ENST00000543082 HPSEQ9Y251 543 aa11.12□□□□□ -0.63
TCF4-208ENST00000543082 C4AP0C0L4 1744 aa11.12□□□□□ -0.63
TCF4-208ENST00000543082 C4BP0C0L5 1744 aa11.12□□□□□ -0.63
TCF4-208ENST00000543082 PALLDQ8WX93 1383 aa11.12□□□□□ -0.63
TCF4-208ENST00000543082 FAM237AA0A1B0GTK4 181 aa11.12□□□□□ -0.63
TCF4-208ENST00000543082 E7EWF7 191 aa11.12□□□□□ -0.63
TCF4-208ENST00000543082 DNAJC21Q5F1R6 531 aaKnown RBP11.12□□□□□ -0.63
TCF4-208ENST00000543082 ARHGEF25Q86VW2 580 aa11.12□□□□□ -0.63
TCF4-208ENST00000543082 FBXL16Q8N461 479 aa11.12□□□□□ -0.63
TCF4-208ENST00000543082 CTCFLQ8NI51 663 aaPredicted RBP11.12□□□□□ -0.63
TCF4-208ENST00000543082 PANX2Q96RD6 677 aa11.12□□□□□ -0.63
TCF4-208ENST00000543082 DESI2Q9BSY9 194 aa11.12□□□□□ -0.63
TCF4-208ENST00000543082 NAA15Q9BXJ9 866 aaKnown RBP11.12□□□□□ -0.63
TCF4-208ENST00000543082 VIPAS39Q9H9C1 493 aa11.12□□□□□ -0.63
TCF4-208ENST00000543082 DBNLQ9UJU6 430 aaKnown RBP11.12□□□□□ -0.63
TCF4-208ENST00000543082 ADKP55263 362 aaKnown RBP11.11□□□□□ -0.63
TCF4-208ENST00000543082 PNOCQ13519 176 aa11.11□□□□□ -0.63
TCF4-208ENST00000543082 WHAMMP3Q1A5X7 153 aa11.11□□□□□ -0.63
TCF4-208ENST00000543082 TICAM2Q86XR7 235 aa11.11□□□□□ -0.63
TCF4-208ENST00000543082 AFAP1L1Q8TED9 768 aa11.11□□□□□ -0.63
TCF4-208ENST00000543082 HAUS7Q99871 368 aa11.11□□□□□ -0.63
TCF4-208ENST00000543082 FAM204AQ9H8W3 233 aa11.11□□□□□ -0.63
TCF4-208ENST00000543082 HELLSQ9NRZ9 838 aa11.11□□□□□ -0.63
TCF4-208ENST00000543082 TOMM22Q9NS69 142 aa11.11□□□□□ -0.63
TCF4-208ENST00000543082 RAI14Q9P0K7 980 aa11.11□□□□□ -0.63
TCF4-208ENST00000543082 DACH1Q9UI36 760 aa11.11□□□□□ -0.63
TCF4-208ENST00000543082 TMEM2Q9UHN6 1383 aa11.11□□□□□ -0.63
TCF4-208ENST00000543082 CTAGE9A4FU28 777 aa11.11□□□□□ -0.63
TCF4-208ENST00000543082 PPP6R2O75170 966 aa11.11□□□□□ -0.63
TCF4-208ENST00000543082 DDX58O95786 925 aaKnown RBP11.11□□□□□ -0.63
TCF4-208ENST00000543082 KIF23Q02241 960 aaPredicted RBP11.11□□□□□ -0.63
TCF4-208ENST00000543082 TNNI3KQ59H18 835 aa11.11□□□□□ -0.63
TCF4-208ENST00000543082 OTUD7BQ6GQQ9 843 aa11.11□□□□□ -0.63
TCF4-208ENST00000543082 CEP89Q96ST8 783 aa11.11□□□□□ -0.63
TCF4-208ENST00000543082 FPGT-TNNI3KV9GXZ4 949 aa11.11□□□□□ -0.63
TCF4-208ENST00000543082 LTN1O94822 1766 aa11.11□□□□□ -0.63
TCF4-208ENST00000543082 CTAGE15A4D2H0 777 aa11.1□□□□□ -0.63
TCF4-208ENST00000543082 AKR1B15C9JRZ8 316 aaPredicted RBP11.1□□□□□ -0.63
TCF4-208ENST00000543082 PPFIA3O75145 1194 aa11.1□□□□□ -0.63
TCF4-208ENST00000543082 CTAGE8P0CG41 777 aa11.1□□□□□ -0.63
TCF4-208ENST00000543082 AARSP49588 968 aaKnown RBP eCLIP11.1□□□□□ -0.63
TCF4-208ENST00000543082 VSNL1P62760 191 aa11.1□□□□□ -0.63
TCF4-208ENST00000543082 PIP4K2BP78356 416 aa11.1□□□□□ -0.63
TCF4-208ENST00000543082 PTPN21Q16825 1174 aa11.1□□□□□ -0.63
TCF4-208ENST00000543082 KIF4BQ2VIQ3 1234 aa11.1□□□□□ -0.63
TCF4-208ENST00000543082 CTAGE6Q86UF2 777 aa11.1□□□□□ -0.63
TCF4-208ENST00000543082 CTAGE4Q8IX94 777 aa11.1□□□□□ -0.63
TCF4-208ENST00000543082 KBTBD3Q8NAB2 608 aa11.1□□□□□ -0.63
TCF4-208ENST00000543082 HOOK1Q9UJC3 728 aaKnown RBP11.1□□□□□ -0.63
TCF4-208ENST00000543082 ADGRG1Q9Y653 693 aa11.1□□□□□ -0.63
TCF4-208ENST00000543082 ECM29Q5VYK3 1845 aa11.1□□□□□ -0.63
TCF4-208ENST00000543082 SPEF2Q9C093 1822 aa11.1□□□□□ -0.63
TCF4-208ENST00000543082 BTBD11A6QL63 1104 aa11.1□□□□□ -0.63
TCF4-208ENST00000543082 ZNF18P17022 549 aa11.1□□□□□ -0.63
TCF4-208ENST00000543082 RESP18Q5W5W9 173 aa11.1□□□□□ -0.63
TCF4-208ENST00000543082 WDR93Q6P2C0 686 aa11.1□□□□□ -0.63
TCF4-208ENST00000543082 ELOA2Q8IYF1 753 aaPredicted RBP11.1□□□□□ -0.63
TCF4-208ENST00000543082 LZTFL1Q9NQ48 299 aa11.1□□□□□ -0.63
TCF4-208ENST00000543082 KIF28PB7ZC32 967 aa11.09□□□□□ -0.63
TCF4-208ENST00000543082 KCNQ3O43525 872 aa11.09□□□□□ -0.63
TCF4-208ENST00000543082 RNF40O75150 1001 aa11.09□□□□□ -0.63
TCF4-208ENST00000543082 RHOXF2BP0C7M4 288 aa11.09□□□□□ -0.63
TCF4-208ENST00000543082 CCDC102BQ68D86 513 aa11.09□□□□□ -0.63
TCF4-208ENST00000543082 METTL16Q86W50 562 aaKnown RBP11.09□□□□□ -0.63
TCF4-208ENST00000543082 RHOXF2Q9BQY4 288 aa11.09□□□□□ -0.63
TCF4-208ENST00000543082 SUGCTQ9HAC7 445 aa11.09□□□□□ -0.63
TCF4-208ENST00000543082 COPRSQ9NQ92 184 aa11.09□□□□□ -0.63
TCF4-208ENST00000543082 MAP3K15Q6ZN16 1313 aa11.09□□□□□ -0.63
TCF4-208ENST00000543082 OVOS2A0A0G2JMS6 1433 aa11.09□□□□□ -0.63
TCF4-208ENST00000543082 PLEKHG1Q9ULL1 1385 aa11.09□□□□□ -0.63
TCF4-208ENST00000543082 MCM3P25205 808 aa11.09□□□□□ -0.63
TCF4-208ENST00000543082 MARCKSP29966 332 aaPredicted RBP11.09□□□□□ -0.63
TCF4-208ENST00000543082 ZNF569Q5MCW4 686 aa11.09□□□□□ -0.63
TCF4-208ENST00000543082 SHC4Q6S5L8 630 aa11.09□□□□□ -0.63
TCF4-208ENST00000543082 DDX46Q7L014 1031 aaKnown RBP11.09□□□□□ -0.63
TCF4-208ENST00000543082 NUTM2AQ8IVF1 878 aaPredicted RBP11.09□□□□□ -0.63
TCF4-208ENST00000543082 KLHDC4Q8TBB5 520 aa11.09□□□□□ -0.63
TCF4-208ENST00000543082 ENOX1Q8TC92 643 aaKnown RBP11.09□□□□□ -0.63
TCF4-208ENST00000543082 NAPGQ99747 312 aaPredicted RBP11.09□□□□□ -0.63
TCF4-208ENST00000543082 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.09□□□□□ -0.63
TCF4-208ENST00000543082 IRX2Q9BZI1 471 aaPredicted RBP11.09□□□□□ -0.63
TCF4-208ENST00000543082 TTF2Q9UNY4 1162 aaKnown RBP11.09□□□□□ -0.63
TCF4-208ENST00000543082 NFE2L3Q9Y4A8 694 aa11.09□□□□□ -0.63
TCF4-208ENST00000543082 MYH8P13535 1937 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 AFDNP55196 1824 aaKnown RBP11.08□□□□□ -0.64
TCF4-208ENST00000543082 HEG1Q9ULI3 1381 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 SOWAHDA6NJG2 315 aa11.08□□□□□ -0.64
TCF4-208ENST00000543082 LRRIQ3A6PVS8 624 aaPredicted RBP11.08□□□□□ -0.64
TCF4-208ENST00000543082 PHACTR2O75167 634 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms