RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 DRD2P14416 443 aa6.88□□□□□ -1.31
MDM2-229ENST00000543046 LIG1P18858 919 aa6.88□□□□□ -1.31
MDM2-229ENST00000543046 ST13P50502 369 aaKnown RBP6.88□□□□□ -1.31
MDM2-229ENST00000543046 SOX4Q06945 474 aaPredicted RBP6.88□□□□□ -1.31
MDM2-229ENST00000543046 ZNF252P-AS1Q0IIN9 211 aa6.88□□□□□ -1.31
MDM2-229ENST00000543046 MRPL58Q14197 206 aaKnown RBP6.88□□□□□ -1.31
MDM2-229ENST00000543046 PCNX4Q63HM2 1172 aa6.88□□□□□ -1.31
MDM2-229ENST00000543046 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.88□□□□□ -1.31
MDM2-229ENST00000543046 WDR18Q9BV38 432 aa6.88□□□□□ -1.31
MDM2-229ENST00000543046 GAS2O43903 313 aaKnown RBP6.87□□□□□ -1.31
MDM2-229ENST00000543046 ZNF862O60290 1169 aa6.87□□□□□ -1.31
MDM2-229ENST00000543046 AOC2O75106 756 aa6.87□□□□□ -1.31
MDM2-229ENST00000543046 H2AFB1P0C5Y9 115 aa6.87□□□□□ -1.31
MDM2-229ENST00000543046 H2AFB2P0C5Z0 115 aa6.87□□□□□ -1.31
MDM2-229ENST00000543046 ADH5P11766 374 aa6.87□□□□□ -1.31
MDM2-229ENST00000543046 HNRNPUQ00839 825 aaKnown RBP eCLIP6.87□□□□□ -1.31
MDM2-229ENST00000543046 AKAP4Q5JQC9 854 aa6.87□□□□□ -1.31
MDM2-229ENST00000543046 RASIP1Q5U651 963 aa6.87□□□□□ -1.31
MDM2-229ENST00000543046 MAP1SQ66K74 1059 aaPredicted RBP6.87□□□□□ -1.31
MDM2-229ENST00000543046 GRIN3AQ8TCU5 1115 aa6.87□□□□□ -1.31
MDM2-229ENST00000543046 WDR89Q96FK6 387 aaPredicted RBP6.87□□□□□ -1.31
MDM2-229ENST00000543046 MYRFLQ96LU7 910 aa6.87□□□□□ -1.31
MDM2-229ENST00000543046 SYNGAP1Q96PV0 1343 aa6.86□□□□□ -1.31
MDM2-229ENST00000543046 DHX15O43143 795 aaKnown RBP6.86□□□□□ -1.31
MDM2-229ENST00000543046 LRRC14Q15048 493 aa6.86□□□□□ -1.31
MDM2-229ENST00000543046 TTBK2Q6IQ55 1244 aa6.86□□□□□ -1.31
MDM2-229ENST00000543046 LLGL2Q6P1M3 1020 aa6.86□□□□□ -1.31
MDM2-229ENST00000543046 PRR23CQ6ZRP0 262 aa6.86□□□□□ -1.31
MDM2-229ENST00000543046 C2CD4AQ8NCU7 369 aaPredicted RBP6.86□□□□□ -1.31
MDM2-229ENST00000543046 CYP8B1Q9UNU6 501 aa6.86□□□□□ -1.31
MDM2-229ENST00000543046 AP4E1Q9UPM8 1137 aa6.86□□□□□ -1.31
MDM2-229ENST00000543046 DYRK3O43781 588 aa6.85□□□□□ -1.31
MDM2-229ENST00000543046 SLFN14P0C7P3 912 aa6.85□□□□□ -1.31
MDM2-229ENST00000543046 BMP3P12645 472 aa6.85□□□□□ -1.31
MDM2-229ENST00000543046 KIF4BQ2VIQ3 1234 aa6.85□□□□□ -1.31
MDM2-229ENST00000543046 MPRIPQ6WCQ1 1025 aa6.85□□□□□ -1.31
MDM2-229ENST00000543046 GPBAR1Q8TDU6 330 aa6.85□□□□□ -1.31
MDM2-229ENST00000543046 ACSBG1Q96GR2 724 aa6.85□□□□□ -1.31
MDM2-229ENST00000543046 NOC4LQ9BVI4 516 aaKnown RBP6.85□□□□□ -1.31
MDM2-229ENST00000543046 CACNA2D2Q9NY47 1150 aa6.85□□□□□ -1.31
MDM2-229ENST00000543046 PODXL2Q9NZ53 605 aa6.85□□□□□ -1.31
MDM2-229ENST00000543046 PPP1R9AQ9ULJ8 1098 aa6.85□□□□□ -1.31
MDM2-229ENST00000543046 HIF3AQ9Y2N7 669 aa6.85□□□□□ -1.31
MDM2-229ENST00000543046 TMPRSS2O15393 492 aa6.84□□□□□ -1.31
MDM2-229ENST00000543046 TRIM37O94972 964 aa6.84□□□□□ -1.31
MDM2-229ENST00000543046 LIG3P49916 1009 aa6.84□□□□□ -1.31
MDM2-229ENST00000543046 MAP3K11Q16584 847 aa6.84□□□□□ -1.31
MDM2-229ENST00000543046 SGO2Q562F6 1265 aa6.84□□□□□ -1.31
MDM2-229ENST00000543046 DYMQ7RTS9 669 aa6.84□□□□□ -1.31
MDM2-229ENST00000543046 FAM20CQ8IXL6 584 aa6.84□□□□□ -1.31
MDM2-229ENST00000543046 SEMA6BQ9H3T3 888 aa6.84□□□□□ -1.31
MDM2-229ENST00000543046 RAXQ9Y2V3 346 aa6.84□□□□□ -1.31
MDM2-229ENST00000543046 ACTL7BQ9Y614 415 aa6.84□□□□□ -1.31
MDM2-229ENST00000543046 K7ELQ4 463 aaPredicted RBP6.83□□□□□ -1.32
MDM2-229ENST00000543046 RLBP1P12271 317 aa6.83□□□□□ -1.32
MDM2-229ENST00000543046 MAP4P27816 1152 aaKnown RBP6.83□□□□□ -1.32
MDM2-229ENST00000543046 USP11P51784 963 aa6.83□□□□□ -1.32
MDM2-229ENST00000543046 RPS26P62854 115 aaKnown RBP6.83□□□□□ -1.32
MDM2-229ENST00000543046 ID3Q02535 119 aa6.83□□□□□ -1.32
MDM2-229ENST00000543046 KCNF1Q9H3M0 494 aa6.83□□□□□ -1.32
MDM2-229ENST00000543046 STOML1Q9UBI4 398 aa6.83□□□□□ -1.32
MDM2-229ENST00000543046 PCDHGC5Q9Y5F6 944 aa6.83□□□□□ -1.32
MDM2-229ENST00000543046 SCARA3Q6AZY7 606 aa6.82□□□□□ -1.32
MDM2-229ENST00000543046 CDPF1Q6NVV7 123 aa6.82□□□□□ -1.32
MDM2-229ENST00000543046 AGMOQ6ZNB7 445 aa6.82□□□□□ -1.32
MDM2-229ENST00000543046 BEND4Q6ZU67 534 aa6.82□□□□□ -1.32
MDM2-229ENST00000543046 GSX1Q9H4S2 264 aaPredicted RBP6.82□□□□□ -1.32
MDM2-229ENST00000543046 FAM105AQ9NUU6 356 aa6.82□□□□□ -1.32
MDM2-229ENST00000543046 CRIM1Q9NZV1 1036 aa6.82□□□□□ -1.32
MDM2-229ENST00000543046 ADAM23O75077 832 aa6.81□□□□□ -1.32
MDM2-229ENST00000543046 LMNB1P20700 586 aa6.81□□□□□ -1.32
MDM2-229ENST00000543046 RXRBP28702 533 aa6.81□□□□□ -1.32
MDM2-229ENST00000543046 ASPAP45381 313 aa6.81□□□□□ -1.32
MDM2-229ENST00000543046 CLEC10AQ8IUN9 316 aa6.81□□□□□ -1.32
MDM2-229ENST00000543046 FBLIM1Q8WUP2 373 aa6.81□□□□□ -1.32
MDM2-229ENST00000543046 GAL3ST3Q96A11 431 aa6.81□□□□□ -1.32
MDM2-229ENST00000543046 FANCD2OSQ96PS1 177 aa6.81□□□□□ -1.32
MDM2-229ENST00000543046 FAM83CQ9BQN1 747 aa6.81□□□□□ -1.32
MDM2-229ENST00000543046 YIPF2Q9BWQ6 316 aa6.81□□□□□ -1.32
MDM2-229ENST00000543046 ATXN3LQ9H3M9 355 aa6.81□□□□□ -1.32
MDM2-229ENST00000543046 C7orf69Q9H7B7 122 aa6.81□□□□□ -1.32
MDM2-229ENST00000543046 PCDHA4Q9UN74 947 aa6.81□□□□□ -1.32
MDM2-229ENST00000543046 PCDHB5Q9Y5E4 795 aa6.81□□□□□ -1.32
MDM2-229ENST00000543046 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.8□□□□□ -1.32
MDM2-229ENST00000543046 HMX2A2RU54 273 aa6.8□□□□□ -1.32
MDM2-229ENST00000543046 F6X3S4 739 aa6.8□□□□□ -1.32
MDM2-229ENST00000543046 TFE3P19532 575 aaPredicted RBP6.8□□□□□ -1.32
MDM2-229ENST00000543046 RAB6AP20340 208 aa6.8□□□□□ -1.32
MDM2-229ENST00000543046 ITGB7P26010 798 aa6.8□□□□□ -1.32
MDM2-229ENST00000543046 PTPN11Q06124 597 aaPredicted RBP6.8□□□□□ -1.32
MDM2-229ENST00000543046 ZC3H12AQ5D1E8 599 aaKnown RBP6.8□□□□□ -1.32
MDM2-229ENST00000543046 LDLRAD1Q5T700 205 aa6.8□□□□□ -1.32
MDM2-229ENST00000543046 TRIM42Q8IWZ5 723 aa6.8□□□□□ -1.32
MDM2-229ENST00000543046 TMEM87AQ8NBN3 555 aa6.8□□□□□ -1.32
MDM2-229ENST00000543046 EZH1Q92800 747 aaPredicted RBP6.8□□□□□ -1.32
MDM2-229ENST00000543046 BACH2Q9BYV9 841 aa6.8□□□□□ -1.32
MDM2-229ENST00000543046 TLR6Q9Y2C9 796 aa6.8□□□□□ -1.32
MDM2-229ENST00000543046 FAM95CA0A1B0GW59 222 aa6.79□□□□□ -1.32
MDM2-229ENST00000543046 FSTP19883 344 aa6.79□□□□□ -1.32
MDM2-229ENST00000543046 ERVK-24P63145 666 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms