RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 SALL1Q9NSC2 1324 aa13.05□□□□□ -0.32
SCG3-202ENST00000542355 PKP1Q13835 747 aa13.04□□□□□ -0.32
SCG3-202ENST00000542355 GRIK5Q16478 980 aa13.04□□□□□ -0.32
SCG3-202ENST00000542355 NCOA7Q8NI08 942 aa13.04□□□□□ -0.32
SCG3-202ENST00000542355 TNPO1Q92973 898 aaKnown RBP13.04□□□□□ -0.32
SCG3-202ENST00000542355 BRF1Q92994 677 aa13.04□□□□□ -0.32
SCG3-202ENST00000542355 NBPF3Q9H094 633 aa13.04□□□□□ -0.32
SCG3-202ENST00000542355 AATFQ9NY61 560 aaKnown RBP eCLIP13.04□□□□□ -0.32
SCG3-202ENST00000542355 NUCB2P80303 420 aa13.04□□□□□ -0.32
SCG3-202ENST00000542355 TRDNQ13061 729 aa13.04□□□□□ -0.32
SCG3-202ENST00000542355 RALYLQ86SE5 291 aaKnown RBP13.04□□□□□ -0.32
SCG3-202ENST00000542355 TBC1D10CQ8IV04 446 aa13.04□□□□□ -0.32
SCG3-202ENST00000542355 COA1Q9GZY4 146 aa13.04□□□□□ -0.32
SCG3-202ENST00000542355 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.04□□□□□ -0.32
SCG3-202ENST00000542355 DOCK2Q92608 1830 aa13.04□□□□□ -0.32
SCG3-202ENST00000542355 MYH7P12883 1935 aa13.03□□□□□ -0.32
SCG3-202ENST00000542355 DTNBO60941 627 aa13.03□□□□□ -0.32
SCG3-202ENST00000542355 ZBTB7AO95365 584 aa13.03□□□□□ -0.32
SCG3-202ENST00000542355 STK3Q13188 491 aa13.03□□□□□ -0.32
SCG3-202ENST00000542355 DOK7Q18PE1 504 aa13.03□□□□□ -0.32
SCG3-202ENST00000542355 INCENPQ9NQS7 918 aa13.03□□□□□ -0.32
SCG3-202ENST00000542355 MTMR7Q9Y216 660 aa13.03□□□□□ -0.32
SCG3-202ENST00000542355 G3V3G9 751 aa13.03□□□□□ -0.32
SCG3-202ENST00000542355 GTF2IP78347 998 aa13.03□□□□□ -0.32
SCG3-202ENST00000542355 CTDSPL2Q05D32 466 aa13.03□□□□□ -0.32
SCG3-202ENST00000542355 ST3GAL1Q11201 340 aa13.03□□□□□ -0.32
SCG3-202ENST00000542355 DCAF8Q5TAQ9 597 aa13.03□□□□□ -0.32
SCG3-202ENST00000542355 ZMYM6O95789 1325 aa13.02□□□□□ -0.32
SCG3-202ENST00000542355 MCM5P33992 734 aa13.02□□□□□ -0.33
SCG3-202ENST00000542355 DIXDC1Q155Q3 683 aa13.02□□□□□ -0.33
SCG3-202ENST00000542355 MFSD14BQ5SR56 506 aa13.02□□□□□ -0.33
SCG3-202ENST00000542355 MB21D2Q8IYB1 491 aaPredicted RBP13.02□□□□□ -0.33
SCG3-202ENST00000542355 STK11IPQ8N1F8 1099 aa13.02□□□□□ -0.33
SCG3-202ENST00000542355 EYA3Q99504 573 aa13.02□□□□□ -0.33
SCG3-202ENST00000542355 SMC3Q9UQE7 1217 aa13.02□□□□□ -0.33
SCG3-202ENST00000542355 MINDY4BA8MYZ0 360 aa13.01□□□□□ -0.33
SCG3-202ENST00000542355 GSTO1P78417 241 aa13.01□□□□□ -0.33
SCG3-202ENST00000542355 APOBRQ0VD83 1088 aa13.01□□□□□ -0.33
SCG3-202ENST00000542355 MKRN3Q13064 507 aaKnown RBP13.01□□□□□ -0.33
SCG3-202ENST00000542355 TMED8Q6PL24 325 aaPredicted RBP13.01□□□□□ -0.33
SCG3-202ENST00000542355 FBXW7Q969H0 707 aa13.01□□□□□ -0.33
SCG3-202ENST00000542355 AGXT2Q9BYV1 514 aa13.01□□□□□ -0.33
SCG3-202ENST00000542355 B4E1Z4 1266 aa13.01□□□□□ -0.33
SCG3-202ENST00000542355 PRC1O43663 620 aa13.01□□□□□ -0.33
SCG3-202ENST00000542355 NKX2-3Q8TAU0 364 aa13.01□□□□□ -0.33
SCG3-202ENST00000542355 TBC1D22AQ8WUA7 517 aa13.01□□□□□ -0.33
SCG3-202ENST00000542355 C7orf43Q8WVR3 580 aa13.01□□□□□ -0.33
SCG3-202ENST00000542355 GPBP1L1Q9HC44 474 aaPredicted RBP13.01□□□□□ -0.33
SCG3-202ENST00000542355 GPHNQ9NQX3 736 aaPredicted RBP13.01□□□□□ -0.33
SCG3-202ENST00000542355 COL11A2P13942 1736 aaPredicted RBP13.01□□□□□ -0.33
SCG3-202ENST00000542355 CACNA1SQ13698 1873 aa13.01□□□□□ -0.33
SCG3-202ENST00000542355 ANTXR2P58335 489 aa13□□□□□ -0.33
SCG3-202ENST00000542355 AKNAD1Q5T1N1 836 aa13□□□□□ -0.33
SCG3-202ENST00000542355 FOXD4L5Q5VV16 416 aaPredicted RBP13□□□□□ -0.33
SCG3-202ENST00000542355 MFSD6Q6ZSS7 791 aa13□□□□□ -0.33
SCG3-202ENST00000542355 FOXD4L4Q8WXT5 416 aaPredicted RBP13□□□□□ -0.33
SCG3-202ENST00000542355 CRNKL1Q9BZJ0 848 aaKnown RBP13□□□□□ -0.33
SCG3-202ENST00000542355 NAP1L2Q9ULW6 460 aaPredicted RBP13□□□□□ -0.33
SCG3-202ENST00000542355 ZDHHC9Q9Y397 364 aa13□□□□□ -0.33
SCG3-202ENST00000542355 NEDD4P46934 1319 aa13□□□□□ -0.33
SCG3-202ENST00000542355 FAM205AQ6ZU69 1335 aa13□□□□□ -0.33
SCG3-202ENST00000542355 C21orf2O43822 256 aa13□□□□□ -0.33
SCG3-202ENST00000542355 LDHCP07864 332 aa13□□□□□ -0.33
SCG3-202ENST00000542355 GJB2P29033 226 aa13□□□□□ -0.33
SCG3-202ENST00000542355 MCM4P33991 863 aa13□□□□□ -0.33
SCG3-202ENST00000542355 PPARAQ07869 468 aa13□□□□□ -0.33
SCG3-202ENST00000542355 DBNDD1Q9H9R9 158 aa13□□□□□ -0.33
SCG3-202ENST00000542355 TOMM22Q9NS69 142 aa13□□□□□ -0.33
SCG3-202ENST00000542355 TACC3Q9Y6A5 838 aa13□□□□□ -0.33
SCG3-202ENST00000542355 LRRC37AA6NMS7 1700 aa12.99□□□□□ -0.33
SCG3-202ENST00000542355 QSER1Q2KHR3 1735 aa12.99□□□□□ -0.33
SCG3-202ENST00000542355 SMIM22K7EJ46 135 aa12.99□□□□□ -0.33
SCG3-202ENST00000542355 BAG3O95817 575 aa12.99□□□□□ -0.33
SCG3-202ENST00000542355 DPEP1P16444 411 aa12.99□□□□□ -0.33
SCG3-202ENST00000542355 RRP12Q5JTH9 1297 aaKnown RBP12.99□□□□□ -0.33
SCG3-202ENST00000542355 GIMAP6Q6P9H5 292 aa12.99□□□□□ -0.33
SCG3-202ENST00000542355 CYB5R4Q7L1T6 521 aa12.99□□□□□ -0.33
SCG3-202ENST00000542355 FBXL16Q8N461 479 aa12.99□□□□□ -0.33
SCG3-202ENST00000542355 TTLL6Q8N841 843 aa12.99□□□□□ -0.33
SCG3-202ENST00000542355 C10orf71Q711Q0 1435 aa12.99□□□□□ -0.33
SCG3-202ENST00000542355 CYP2D7A0A087X1C5 515 aa12.98□□□□□ -0.33
SCG3-202ENST00000542355 USP17L12C9JPN9 530 aa12.98□□□□□ -0.33
SCG3-202ENST00000542355 USP17L21D6R901 530 aa12.98□□□□□ -0.33
SCG3-202ENST00000542355 SCRN1Q12765 414 aa12.98□□□□□ -0.33
SCG3-202ENST00000542355 R3HDM1Q15032 1099 aaKnown RBP12.98□□□□□ -0.33
SCG3-202ENST00000542355 CTR9Q6PD62 1173 aa12.98□□□□□ -0.33
SCG3-202ENST00000542355 STAG1Q8WVM7 1258 aa12.98□□□□□ -0.33
SCG3-202ENST00000542355 GTF3C6Q969F1 213 aa12.98□□□□□ -0.33
SCG3-202ENST00000542355 GBP4Q96PP9 640 aa12.98□□□□□ -0.33
SCG3-202ENST00000542355 NOL10Q9BSC4 688 aaKnown RBP12.98□□□□□ -0.33
SCG3-202ENST00000542355 CNNM2Q9H8M5 875 aa12.98□□□□□ -0.33
SCG3-202ENST00000542355 DCP1AQ9NPI6 582 aaPredicted RBP12.98□□□□□ -0.33
SCG3-202ENST00000542355 ATP8A2Q9NTI2 1148 aa12.98□□□□□ -0.33
SCG3-202ENST00000542355 ZSWIM5Q9P217 1185 aa12.98□□□□□ -0.33
SCG3-202ENST00000542355 DUOX1Q9NRD9 1551 aa12.98□□□□□ -0.33
SCG3-202ENST00000542355 LTBP1Q14766 1721 aa12.98□□□□□ -0.33
SCG3-202ENST00000542355 GOLGB1Q14789 3259 aaKnown RBP12.98□□□□□ -0.33
SCG3-202ENST00000542355 MROH7-TTC4A0A0A0MT08 1334 aa12.98□□□□□ -0.33
SCG3-202ENST00000542355 F8W031 263 aaPredicted RBP12.98□□□□□ -0.33
SCG3-202ENST00000542355 KDM4AO75164 1064 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms