RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 IGDCC4Q8TDY8 1250 aa15.43■□□□□ 0.06
PRKAB1-206ENST00000541640 MPHOSPH8Q99549 860 aa15.43■□□□□ 0.06
PRKAB1-206ENST00000541640 THRAP3Q9Y2W1 955 aaKnown RBP15.43■□□□□ 0.06
PRKAB1-206ENST00000541640 NEDD4P46934 1319 aa15.43■□□□□ 0.06
PRKAB1-206ENST00000541640 B4E1Z4 1266 aa15.43■□□□□ 0.06
PRKAB1-206ENST00000541640 CRKLP46109 303 aaKnown RBP15.43■□□□□ 0.06
PRKAB1-206ENST00000541640 SF3A1Q15459 793 aaKnown RBP15.43■□□□□ 0.06
PRKAB1-206ENST00000541640 BCORQ6W2J9 1755 aa15.43■□□□□ 0.06
PRKAB1-206ENST00000541640 CAMTA2O94983 1202 aa15.42■□□□□ 0.06
PRKAB1-206ENST00000541640 ANO1Q5XXA6 986 aa15.42■□□□□ 0.06
PRKAB1-206ENST00000541640 CPLX2Q6PUV4 134 aaKnown RBP15.42■□□□□ 0.06
PRKAB1-206ENST00000541640 SYNE3Q6ZMZ3 975 aa15.42■□□□□ 0.06
PRKAB1-206ENST00000541640 DRC7Q8IY82 874 aa15.42■□□□□ 0.06
PRKAB1-206ENST00000541640 IFNL3Q8IZI9 196 aa15.42■□□□□ 0.06
PRKAB1-206ENST00000541640 MAGEB6Q8N7X4 407 aa15.42■□□□□ 0.06
PRKAB1-206ENST00000541640 EPB41L4AQ9HCS5 686 aaPredicted RBP15.42■□□□□ 0.06
PRKAB1-206ENST00000541640 GJB4Q9NTQ9 266 aa15.42■□□□□ 0.06
PRKAB1-206ENST00000541640 SPATA31A1Q5TZJ5 1347 aa15.42■□□□□ 0.06
PRKAB1-206ENST00000541640 A0A1B0GVL5 298 aa15.42■□□□□ 0.06
PRKAB1-206ENST00000541640 ATP6V1AP38606 617 aa15.42■□□□□ 0.06
PRKAB1-206ENST00000541640 NDUFA8P51970 172 aa15.42■□□□□ 0.06
PRKAB1-206ENST00000541640 CCDC152Q4G0S7 254 aa15.42■□□□□ 0.06
PRKAB1-206ENST00000541640 MRFAP1L1Q96HT8 127 aa15.42■□□□□ 0.06
PRKAB1-206ENST00000541640 ALG1Q9BT22 464 aa15.42■□□□□ 0.06
PRKAB1-206ENST00000541640 LY9Q9HBG7 655 aa15.42■□□□□ 0.06
PRKAB1-206ENST00000541640 SEC31BQ9NQW1 1179 aa15.42■□□□□ 0.06
PRKAB1-206ENST00000541640 MBD4O95243 580 aa15.41■□□□□ 0.06
PRKAB1-206ENST00000541640 LIFRP42702 1097 aa15.41■□□□□ 0.06
PRKAB1-206ENST00000541640 DDB1Q16531 1140 aa15.41■□□□□ 0.06
PRKAB1-206ENST00000541640 DHX40Q8IX18 779 aaKnown RBP15.41■□□□□ 0.06
PRKAB1-206ENST00000541640 NAPBQ9H115 298 aa15.41■□□□□ 0.06
PRKAB1-206ENST00000541640 CLIP2Q9UDT6 1046 aa15.41■□□□□ 0.06
PRKAB1-206ENST00000541640 ZBTB43O43298 467 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 CDC27P30260 824 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 NTRK3Q16288 839 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 CEP57L1Q8IYX8 460 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 SDF4Q9BRK5 362 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 PDCL3Q9H2J4 239 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 CNNM2Q9H8M5 875 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 SENP2Q9HC62 589 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 NRBP1Q9UHY1 535 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 MYH14Q7Z406 1995 aaKnown RBP15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 PNPLA7Q6ZV29 1317 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 NID2Q14112 1375 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 LOC102724428A0A0B4J2F2 783 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 GSG1L2A8MUP6 293 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 NTSR2O95665 410 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 GNAT2P19087 354 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 GTF2F1P35269 517 aaKnown RBP eCLIP15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 IGHMBP2P38935 993 aaKnown RBP15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 SIK1P57059 783 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 TMEM67Q5HYA8 995 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 AXDND1Q5T1B0 1012 aaPredicted RBP15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 NAT10Q9H0A0 1025 aaKnown RBP15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 SPATA31A5Q5VU36 1347 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 SPATA31A7Q8IWB4 1347 aa15.4■□□□□ 0.06
PRKAB1-206ENST00000541640 BECN2A8MW95 431 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 SNAP23O00161 211 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 CMA1P23946 247 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 SLC39A14Q15043 492 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 KRT40Q6A162 431 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 AIFM3Q96NN9 605 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 KRT23Q9C075 422 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 ARMT1Q9H993 441 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 FAM217BQ9NTX9 383 aaPredicted RBP15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 KIAA1468Q9P260 1216 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 BCL9LQ86UU0 1499 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 ITPK1Q13572 414 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 AKNAD1Q5T1N1 836 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 NFXL1Q6ZNB6 911 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 MICU3Q86XE3 530 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 VPS37DQ86XT2 251 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 FNBP4Q8N3X1 1017 aaPredicted RBP15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 BPIFA3Q9BQP9 254 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 ZSWIM5Q9P217 1185 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 USP21Q9UK80 565 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 STK36Q9NRP7 1315 aa15.39■□□□□ 0.05
PRKAB1-206ENST00000541640 FAM177BA6PVY3 158 aa15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 GOLGA8AA7E2F4 631 aa15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 RXRAP19793 462 aa15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 IARSP41252 1262 aaKnown RBP15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 CTDSPL2Q05D32 466 aa15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 STAG1Q8WVM7 1258 aa15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 MAP7D2Q96T17 732 aa15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 TACC3Q9Y6A5 838 aa15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 A0A1B0GUL6 1792 aa15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 COL5A3P25940 1745 aaPredicted RBP15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 PPP6R2O75170 966 aa15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 ZNF202O95125 648 aa15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 BCAMP50895 628 aa15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 LRMPQ12912 555 aa15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 MARCH10Q8NA82 808 aaPredicted RBP15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 PHKBQ93100 1093 aa15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 MTA3Q9BTC8 594 aa15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 INCENPQ9NQS7 918 aa15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 NIP7Q9Y221 180 aaKnown RBP eCLIP15.38■□□□□ 0.05
PRKAB1-206ENST00000541640 IFIT3O14879 490 aaKnown RBP15.37■□□□□ 0.05
PRKAB1-206ENST00000541640 RANBP6O60518 1105 aaKnown RBP15.37■□□□□ 0.05
PRKAB1-206ENST00000541640 U2AF2P26368 475 aaKnown RBP eCLIP15.37■□□□□ 0.05
PRKAB1-206ENST00000541640 RBM10P98175 930 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms