RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 ZFYP08048 801 aaPredicted RBP22.74■■□□□ 1.23
VPS33A-205ENST00000541169 ANTXR1Q9H6X2 564 aa22.74■■□□□ 1.23
VPS33A-205ENST00000541169 POLR2AP24928 1970 aaKnown RBP22.74■■□□□ 1.23
VPS33A-205ENST00000541169 NPM3O75607 178 aaKnown RBP22.73■■□□□ 1.23
VPS33A-205ENST00000541169 NF2P35240 595 aa22.73■■□□□ 1.23
VPS33A-205ENST00000541169 APLP1P51693 650 aa22.73■■□□□ 1.23
VPS33A-205ENST00000541169 PPP4CP60510 307 aa22.73■■□□□ 1.23
VPS33A-205ENST00000541169 SLC9C2Q5TAH2 1124 aa22.73■■□□□ 1.23
VPS33A-205ENST00000541169 USP48Q86UV5 1035 aa22.73■■□□□ 1.23
VPS33A-205ENST00000541169 KBTBD3Q8NAB2 608 aa22.73■■□□□ 1.23
VPS33A-205ENST00000541169 HOOK2Q96ED9 719 aa22.73■■□□□ 1.23
VPS33A-205ENST00000541169 GLIS2Q9BZE0 524 aaPredicted RBP22.73■■□□□ 1.23
VPS33A-205ENST00000541169 DEFB129Q9H1M3 183 aa22.73■■□□□ 1.23
VPS33A-205ENST00000541169 VEZTQ9HBM0 779 aa22.73■■□□□ 1.23
VPS33A-205ENST00000541169 PPP4R2Q9NY27 417 aa22.73■■□□□ 1.23
VPS33A-205ENST00000541169 CYP7A1P22680 504 aa22.72■■□□□ 1.23
VPS33A-205ENST00000541169 BTDP43251 543 aa22.72■■□□□ 1.23
VPS33A-205ENST00000541169 UBE3CQ15386 1083 aa22.72■■□□□ 1.23
VPS33A-205ENST00000541169 SUPT20HL1Q3ZLR7 823 aa22.72■■□□□ 1.23
VPS33A-205ENST00000541169 CDC42EP5Q6NZY7 148 aa22.72■■□□□ 1.23
VPS33A-205ENST00000541169 PLEKHM2Q8IWE5 1019 aa22.72■■□□□ 1.23
VPS33A-205ENST00000541169 MAGEB6Q8N7X4 407 aa22.72■■□□□ 1.23
VPS33A-205ENST00000541169 OTUD7AQ8TE49 926 aaPredicted RBP22.72■■□□□ 1.23
VPS33A-205ENST00000541169 EVI5LQ96CN4 794 aa22.72■■□□□ 1.23
VPS33A-205ENST00000541169 IDI2Q9BXS1 227 aa22.72■■□□□ 1.23
VPS33A-205ENST00000541169 USP40Q9NVE5 1235 aa22.72■■□□□ 1.23
VPS33A-205ENST00000541169 NDUFB9Q9Y6M9 179 aa22.72■■□□□ 1.23
VPS33A-205ENST00000541169 TRPM7Q96QT4 1865 aa22.71■■□□□ 1.23
VPS33A-205ENST00000541169 CLRN2A0PK11 232 aa22.71■■□□□ 1.23
VPS33A-205ENST00000541169 ZNF384Q8TF68 577 aa22.71■■□□□ 1.23
VPS33A-205ENST00000541169 PCDHAC2Q9Y5I4 1007 aa22.71■■□□□ 1.23
VPS33A-205ENST00000541169 ASTN2O75129 1339 aaPredicted RBP22.71■■□□□ 1.23
VPS33A-205ENST00000541169 ENTPD3O75355 529 aa22.7■■□□□ 1.22
VPS33A-205ENST00000541169 PDE6AP16499 860 aa22.7■■□□□ 1.22
VPS33A-205ENST00000541169 HSPA6P17066 643 aa22.7■■□□□ 1.22
VPS33A-205ENST00000541169 FKBP1BP68106 108 aa22.7■■□□□ 1.22
VPS33A-205ENST00000541169 MYO5AQ9Y4I1 1855 aaKnown RBP22.7■■□□□ 1.22
VPS33A-205ENST00000541169 MYH7P12883 1935 aa22.69■■□□□ 1.22
VPS33A-205ENST00000541169 RPAP1Q9BWH6 1393 aaPredicted RBP22.69■■□□□ 1.22
VPS33A-205ENST00000541169 TMEM88BA6NKF7 163 aa22.69■■□□□ 1.22
VPS33A-205ENST00000541169 CREBZFQ9NS37 354 aa22.69■■□□□ 1.22
VPS33A-205ENST00000541169 ADM5C9JUS6 153 aa22.68■■□□□ 1.22
VPS33A-205ENST00000541169 ADD2P35612 726 aa22.68■■□□□ 1.22
VPS33A-205ENST00000541169 RASA3Q14644 834 aa22.68■■□□□ 1.22
VPS33A-205ENST00000541169 TSHZ3Q63HK5 1081 aa22.68■■□□□ 1.22
VPS33A-205ENST00000541169 FAM151AQ8WW52 585 aa22.68■■□□□ 1.22
VPS33A-205ENST00000541169 CDCA5Q96FF9 252 aa22.68■■□□□ 1.22
VPS33A-205ENST00000541169 TCP10L2B9ZVM9 353 aa22.67■■□□□ 1.22
VPS33A-205ENST00000541169 EDC3Q96F86 508 aaKnown RBP22.67■■□□□ 1.22
VPS33A-205ENST00000541169 RFX7Q2KHR2 1363 aa22.66■■□□□ 1.22
VPS33A-205ENST00000541169 ZNF532Q9HCE3 1301 aa22.66■■□□□ 1.22
VPS33A-205ENST00000541169 MAGEB6P1A0A0J9YX57 407 aa22.66■■□□□ 1.22
VPS33A-205ENST00000541169 TRAF5O00463 557 aa22.66■■□□□ 1.22
VPS33A-205ENST00000541169 CELF2O95319 508 aaKnown RBP22.66■■□□□ 1.22
VPS33A-205ENST00000541169 RHBDL3P58872 404 aa22.66■■□□□ 1.22
VPS33A-205ENST00000541169 C2orf69Q8N8R5 385 aa22.66■■□□□ 1.22
VPS33A-205ENST00000541169 AATFQ9NY61 560 aaKnown RBP eCLIP22.66■■□□□ 1.22
VPS33A-205ENST00000541169 TCRBV5S4A2TA0A5A2 114 aa22.65■■□□□ 1.22
VPS33A-205ENST00000541169 UNCXA6NJT0 531 aa22.65■■□□□ 1.22
VPS33A-205ENST00000541169 RNF113AO15541 343 aaKnown RBP22.65■■□□□ 1.22
VPS33A-205ENST00000541169 TEX11Q8IYF3 940 aa22.65■■□□□ 1.22
VPS33A-205ENST00000541169 FSD1Q9BTV5 496 aa22.65■■□□□ 1.22
VPS33A-205ENST00000541169 COL2A1P02458 1487 aaPredicted RBP22.65■■□□□ 1.22
VPS33A-205ENST00000541169 PPP1R12BO60237 982 aaPredicted RBP22.64■■□□□ 1.21
VPS33A-205ENST00000541169 ADGRA1Q86SQ6 560 aa22.64■■□□□ 1.21
VPS33A-205ENST00000541169 HHIPL1Q96JK4 782 aa22.64■■□□□ 1.21
VPS33A-205ENST00000541169 WDHD1O75717 1129 aaPredicted RBP22.63■■□□□ 1.21
VPS33A-205ENST00000541169 CST9Q5W186 159 aa22.63■■□□□ 1.21
VPS33A-205ENST00000541169 APPBP2Q92624 585 aa22.63■■□□□ 1.21
VPS33A-205ENST00000541169 CRNKL1Q9BZJ0 848 aaKnown RBP22.63■■□□□ 1.21
VPS33A-205ENST00000541169 DHX36Q9H2U1 1008 aaKnown RBP22.63■■□□□ 1.21
VPS33A-205ENST00000541169 GBA2Q9HCG7 927 aaPredicted RBP22.63■■□□□ 1.21
VPS33A-205ENST00000541169 CNTNAP1P78357 1384 aa22.63■■□□□ 1.21
VPS33A-205ENST00000541169 TRIM6-TRIM34B2RNG4 842 aa22.62■■□□□ 1.21
VPS33A-205ENST00000541169 HIP1O00291 1037 aa22.62■■□□□ 1.21
VPS33A-205ENST00000541169 RGS3P49796 1198 aa22.62■■□□□ 1.21
VPS33A-205ENST00000541169 CACNB3P54284 484 aa22.62■■□□□ 1.21
VPS33A-205ENST00000541169 DCAF15Q66K64 600 aa22.62■■□□□ 1.21
VPS33A-205ENST00000541169 ARMC9Q7Z3E5 817 aa22.62■■□□□ 1.21
VPS33A-205ENST00000541169 TEPSINQ96N21 525 aa22.62■■□□□ 1.21
VPS33A-205ENST00000541169 RIOK1Q9BRS2 568 aaKnown RBP22.62■■□□□ 1.21
VPS33A-205ENST00000541169 ZNF408Q9H9D4 720 aa22.62■■□□□ 1.21
VPS33A-205ENST00000541169 FAM198AQ9UFP1 575 aa22.62■■□□□ 1.21
VPS33A-205ENST00000541169 TAOK2Q9UL54 1235 aa22.62■■□□□ 1.21
VPS33A-205ENST00000541169 PAPPA2Q9BXP8 1791 aa22.62■■□□□ 1.21
VPS33A-205ENST00000541169 PDE4AP27815 886 aa22.61■■□□□ 1.21
VPS33A-205ENST00000541169 MIGA1Q8NAN2 632 aa22.61■■□□□ 1.21
VPS33A-205ENST00000541169 SH3RF3Q8TEJ3 882 aaPredicted RBP22.61■■□□□ 1.21
VPS33A-205ENST00000541169 AIDAQ96BJ3 306 aa22.61■■□□□ 1.21
VPS33A-205ENST00000541169 DDRGK1Q96HY6 314 aa22.61■■□□□ 1.21
VPS33A-205ENST00000541169 TMEM39BQ9GZU3 492 aa22.61■■□□□ 1.21
VPS33A-205ENST00000541169 ATRNL1Q5VV63 1379 aa22.61■■□□□ 1.21
VPS33A-205ENST00000541169 FOCADQ5VW36 1801 aa22.6■■□□□ 1.21
VPS33A-205ENST00000541169 GNAT2P19087 354 aa22.6■■□□□ 1.21
VPS33A-205ENST00000541169 NFIAQ12857 509 aa22.6■■□□□ 1.21
VPS33A-205ENST00000541169 TTC22Q5TAA0 569 aa22.6■■□□□ 1.21
VPS33A-205ENST00000541169 TLL2Q9Y6L7 1015 aa22.6■■□□□ 1.21
VPS33A-205ENST00000541169 USP5P45974 858 aa22.59■■□□□ 1.21
VPS33A-205ENST00000541169 TCP10Q12799 353 aa22.59■■□□□ 1.21
VPS33A-205ENST00000541169 MAP3K11Q16584 847 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms